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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0597100 |
| Transcript ID | LotjaGi1g1v0597100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metacaspase-1; TAIR: AT1G02170.1 metacaspase 1; Swiss-Prot: sp|Q7XJE6|MCA1_ARATH Metacaspase-1; TrEMBL-Plants: tr|A0A072TYB8|A0A072TYB8_MEDTR Metacaspase-like protein; Found in the gene: LotjaGi1g1v0597100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:113682608..113689725) extracted from Lotus japonicus Gifu genome v1.2.
AATTTACCCGACCAAAAACATTTAACCATTTTTCATATTGTTATCCTCTCGGGTTGAACACATTGTTTGTGTGTAAATAA TTGAAAAGGTTGAATGCAATGTAGAAGGTGAGAATGTAGAAGGTGAGAACTGAGAACCAAAAAAATTATCATCCCATATT CCCATCTCATTCCTCTAGTATTATTTTTCTCGCTTTTTTTTTGGTCAATTTTTTTCTCGCTTTATTTAACTATTTATTTT CTCAACCGCCGCCGATTTTTGTTTTCTACTCTATTATTTATTTCTCATTCATGATTCAACAACTCCATTTCTCCAAATAT AAAAAATTGAAGATGTGACCCGTTAAACTCTTTAAAATTGCACCCAAAAATACACTATAAAAAACAAAAGAAACGGTCAA AATCACTAAAATAATAAATAATGTGGCCCACCACTCACCAAATCCACATATCACATCACATCCCTCAAAAAATAAAAAAA TAAAACAAATAAAAAAAACGCGTATCAGTTCCTCCGTTTTCTTCATCAAAACTCTCCATACTTCTTTCTCCATATTCCTC CTCATACCCATTCCTCACTACACCTTCAACCCTCGCTGAAATCCCTATTCTACCCTCACCCTTCTCCCCAATTTACCAAC CGGCAGCCATGTACAGCAACATGCTCGTCAACTGCTCCAACTGCCGAACGCCGCTGCAACTGCCTCCCGGCGCCGGATCC ATCCGCTGCGCCCTCTGCCAGGCTGTCACTCCCGTCCCCGACCCACGCGCTCTCCCTCCCCAGCCGTACGCGGTTCCAGG TCCCTCGCCGAGCTTCCACGCGCCGCCCGGTCCTCCGCCGAGCTTCCACGGCCGCAAGAAGGCCGTGATCGTCGGCATCT CGTACAGGTACTCGCGCCATGAGCTCAAGGGATGCATCAACGACGCCAAGTGCATGAAATACCTTCTCATCAACAAGTTC AAATTTCCAGAACCTTCCATCATCATGCTCACCGGTACGCTTTCTGATCGGGTGGTTTTTCTGTTTCTTTCGCCGGAAAA GTAACCGCTGCAATTGATTGTGAATTTTCCTTAGATTGGATTGATTTGAATTTTCTGGTTAGTTTCCTTTGAATTGATTT ATTGATTTTATTCGTTCTGCATGAGATGTGGGGTTTTACTGTTTTCCTTTGAATTTAGTCTGATTTACTCAAATTGGTTT TCATGTTTACCTATTGCCATTGCATCTGCATGACCTTTCTAGTTAGTTAGGGATTAGGGATAGTGTTGCTAATTGCGGAT GGCGGTTCATGGCGGCCATATGGTGGGATATCGGCCATGGCGGAAAGCTAAAAACCCGCCATGCGGATATTTGATAACAC GTTCCACTGCTTTATTGCGGCTGCCTGCTATGTCATGGTTTTTGAGGTCTCCATGATCACATTGCAACTGCATTTGTCTG CATTTTTCCATAACGTCAAGGATCATGACATAACTGCAACTACGACCACAACCGGGATATAAAACCTTGAGGGTTACTGT TGATTCTCTTACAGTTATATGGATGTAACTTAACTTCTGATAGTTACTTTTGTAGCTAATTTGAAAATACTACAAACTCA AAAGGACTACATGTTTTCAGTTTAATTGTTACATTGAAAATTATCTAAGGTACTTTTATTAATTTTCTGTTTTTATATTA TTGTTTGCTTTGGCCTTTGAGTTCTTTTAGCATTCTGATTTCTAGATATTTATTCTAAAAAAATAGTAACTAGTTTATTG AATGCAATGACCCACCCCATTTGAATTTTCTGTTTTGGTTGACTGATAGTTTACACTCATTCCACATGCATGCTCTCCAA AGGGCCAGTAGATGATATATAACTAGTGTTATGAAATATCTGCATGGGGCCACCATAGCGGAATCTCATGGTGGGTTTTT GGCTCTCCGCCATAGTCCGCCATCTACCATTAACAACATTGTATTCAACATCAGTTTCTCTTCCTATGGTTTTTAAAGTA ACAATTTGCCCCCTATGTTTTGCTCTGTTAACCCTTAAAGATTTTTCCTTCCATTTACAAGGAAAAACACATGTTAAAAT TTAGAATTTTTTTAGTTTCCATCTCAACAGTGATTGTGCCTACTAATCTTTCATTTTATAATAAGAGTGATGCATTGTTG TTTTGTATCATGAGGATTCAATTGCAGTTTCTTTATCCACTTTTGAATTTGTCAAAATGCAGAAGAAGAAGATCCCCGTG GCCCAAAATTCCCATCCAAGCACAACATCCGGATGGCAATGTATTGGCTTGCACAAGGATGTCAACCTGGAGACTCCCTG GTTTTTCATTATTCTGGTCATGGGTCACAGCAAAGGAACTATAGTGGTGATGAAGCTGATGGATATGATGAAACAATTTG TCCTTTTGATTTTGAAACACAGGGTATGATTGTAGATGATGAGATCAATGCAGCGCTTGTAAGACCTCTTACTCATGGGG TTAGGCTGCATGCGCTAATTGATGCCTGCCATAGTGGCACTGTTCTAGATTTGCCATATCTTTGCAGAATGAACAGGTTA CCTTCTAAAGATAGTCTTCTTATAGTTTCTAATTGCATGGTAACTAATACCACCTCCATTCCTGATCTTTTGTTGTTTTG GGTTTTTTGCCATTTTTTGAAAACTTTTGTTATTTTAGAAATCCAAGATTATTTATCTCATTTTTTCCATATATTCCCTC TTTAATATTTTCTCAACTACTATAATTAAATCTCTAACTTATGACCTCCTATCTTCACCTATCATAATTTTCTCCAACTA CTCAACCAGTTACCATCATTCTCTCTTTTATATAACTCACTTATGAAATAAGTGTTTTTAGTAAAGTTATATATGAATTA AAGAGCTATTTAACTGTTTGCTTAACCTTAAACAAGAAAAGATCAGGAACGGAGGTAGTACGATTTTGGCTTTGTTGACA TTAGCATAGTGATGTTCGATAAACAATTTGTTAAAGATGATAACTTTTTTATTTATCAATTCAGCTTTTGCATTTTGAAA GTTTAATATCAAGTTCATATATGTCATATTAATTCTCTAAGGTTTTGAAATTTTCATTATTTTGTTTCTCCAATGAAAAA AAAATTGGGAAGGAAAATGCTAGATGAGTGGAAGAGGAGTACTTTGATAACTACTTGCAAGAGTAAAGGAGAGATGACAA ATTATACAAACTATTGAGAAATTAAGCTAATGAGCTGCATTCTAAATCTGTAGGAAAATGTGATTGTGATAAAAACCTTG GGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTT CCAATGTGGGACTCAAGTCCCATACCTTGCAATGAGGTCCTAACATCCCACCACGCTCTGCAGCCCCGGTGCCCACGCGA GCTGGCTGTGCACTAGCCCACGACTAGTCCCGGGCGAACACTGCAATGCCGGCGTCACCACCCGCGCCGCTCGTTTGCAG CTCAGAGACATGGTGGAAGGCTCTGATACCATTGATAAAAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGT TGGAGAGCCCAAGGCCTTATAAACCCCACATTTGAATCTCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATG GGGTCCTAACAGATTGAGAGTAGGAAAGAATATAATTTATATCCGAGAAGTATAATTTTATGGCAGGGAGGTCAACCGTG GATGTTATATTGCAGGGTTTGGTGGAAAGATACAAAATGAAATAAGAAGACCTACACCTGTCTTCCCTGATCTTGAACAA TCTATGATGGGGCACCATGAGAAATAATTTGTTAGTAATTTTTTAAGCTTCTTAGCAAATGAAAGAAACTGGAATAAAAT GTTGGAAAGTAGAGAGTGCAGAGAAAGAGACTAAAATATGTTCTCTGAAAGTCTCTGAATATGAATTCTTGACTCTGACT AACCGTGAGCTGGTTTTATGCACATATAGTCTGGCCTCAATTCAGTTATCTTAAACTGCCCCCCTAACTACCTTCTAATA GATAATTAATTCTGTTAGAACAGAACCATAATAGCTGAGCTGTCATCTGACATGGGGAAGCTCTAGAAAAGAAATAGGTT TAAATTGCACCGATTTGAGCAATAAAGAATATATATGATGATGGATAATAATTAAGATCTTATCTCATGGATGTTTAGCA AAAGATTTTTCTATAATAGGTTTGAACCAGATATTGTTTGACTCCATACATTTTCAGTTTGCACATCCCAAAGCAGTCCC TCAATGTATGGTTTTCTTGGATGATGCAATCCTAGTTGAGTTGAGTAATGAATGTAGGGGAGTATATTCTGAAGTTGTGA GAGAAGCTTTGGAATCGAAGCATTTTCTGTTAAGAATAAGATTAAGCATATGAAATATACAAGTTTAGCAAAGGTTAAAC TATCAATGATTTGGAGGCTGGAGCTGAAAAGTGAGTATTAGAAATAATGGGGAAATTGATGGGGGATGTCGCATATATGA TTTTGAGCTGGGGAATGAAATGCAGATATGCTTTAAGCAGTGTCATTAGTCATTACAGAAGGTCAATGACTATCAAACTC AAAATAATGGAAAATTCTACAATAAAACCAGAAATGCTGTGTGGTGTAGGGCAATGAAGAATCAGCCAGTGCAAAATGTA TTTTGTGTGTGAGAGTGTAGAGGTGGATGACGGGATATACGAATTAAGATAAGAACAGGGAATTTTTATGCCAGTTGGAG TGTCATTTATTGATTAAAAAGATGACAAATACTCACCTAAGGTGGTTTAGTTATGTGTTTATGTGAGAAGACATATTGAT AACATCTGAATCGTGTCTATTGAGCTATGTTGTTGAGTCCATGTGGTGGGATAAGGCTTATTTATTCTTTAATTTTCTTT ATTTCTTATTTGCGTTACTTGCATTTGTTCATTCAAAACTGGAGTTTAAGATAGTAAGAGAGTTGGGATGAAGCAAACTA AGATGTACACTGCATTGTCTATTTTATTTTATTTTCCTCTGAATGTTTTAGAAATATAGTTTCTGTTTTTGTTTTAGAAT TGAATATAAACAGTGGTGTCAAATATATGTAGTTCACTGATACGTTGCATTCATTGTTTCTATCTTTCCTGTAACAGTTC TGGACATTATGCATGGGAGGACCATCGCCCTAGGTCAGGTGTATGGAAGGGATCAAGTGGTGGAGAAGTTATCTGTTTTA GTGGATGTGACGATCATCAAACCTCTGCAGATACATCTGTAAGTTTCACGATATTCAAGTTGATTTCTGCCTTAAATTGG CATTTGGAAGAGTTTCTTTGAAGTTTATGTAGGTTTATCTGTTGACATAAGCACTTAAGTATATATGTAGTTAATTTTAT AAGAATAACTTATGGCCTAGTTATAATCTCTTCTGAACTTATTTCAGTAAGTTTATCAAATAAGGCCCTGTTTGGAAGAG TTTATTTGAACTTATCTTATAGCATGAACACTTATGTACGTTTTTGGAAGAGCTCATGGTCTACCTATAAGCTATTTTGA GCTTATTTCCTCATAAGCTGTATAGATTTCTTATGATAAGAGCTTATGTTTACATATAATCTTTTTTCAGTTTATTTCAA TAAACTTCTCAAATTAGCTCATGAATGCATAAACGTATATTGCCATAAGCACTTAATTAAGCTGATTACCCAAATGAACC TTAAGTTTGTAAACAAGCACTTATCAACAAAGTTCTCATGTGAACTAAGCTTTAACTTTTTTACCTAAACACGTCTTTAG ACTGTTTCTATCTTGAGCTGAGACCTGTTGTCTGAGAGCATAATTACTTTCACATAAACAGGCACTGTCGAAGATTACAT CGACTGGGGCCATGACGTTTTGCTTCATACAAGCCATAGAGCGCGGTCATGGAGCCACCTATGGTAGCATTCTTAATGCA ATGCGCACTGCCATAAAAAATGTTGGCGGCAGTGGGGGTGGGGGTGGTGATGTGGTGACATCTCTTCTCTCCATGCTTTT GACCGGCGGTAGTGGTCTTTCTGTTGGTGGACTGAGACAGGTAAATATAGTTCCATTTGAAAGTTATCTGATGATATTAC AAATCAAGTTTGAATTGTTTCCTTTCTATGACATCCTTCATGATCTGAACTCATTAGTTCTTGTAGACCACCTATATCAG TTCTTTAGAAGTTTGTGTCTACTGAGATCTTCTTATGGTTGACTGACTACTGCTATTGTTTTTTCTTGCCCTGTCCTTTT GTTTCGACAGGAACCGCAGCTAACAGCTTGTGAAATGTTCGATGTCTATAGCAAACCTTTCTCATTGTGATACTCTAACA AGTATACTGCAATTTCTTTTCCTTTTCAATTCCCCTGTATATTATTATAGTCATTCCGATGACAAATTAATGTACAATGA TATAGAATTAGATGGTTTTATTATTATTCTTATTATTATTATTATTTTGGAAACCAACGAGGATGTGCCTGGTTAAATTT ATGTCTATTGAGAATATGAAATGCTTTCAGTAACGAAATTTTTTCTGTGCTAGTGTAGTTGGTTATCAATGCTTAGTTAA TCTGTTCTTTTTTAGAGAAAAGAAAACTCACCTGTCAAATTGTAAAACAAGACCCTATTAGAGTTATTATAGAAGAGTCC CTATTTGATCTATATCTCTGCACATATGAGAGTGTTGAACCAAGAGTTCTAGCTCTTAGACCAACTTTAAAACCATGAGA AAACACAAGAATCAGGTTGAATTGTGCTACTAAAACTTGTCTAAGGTTTTCCTAAAAACCCTTTGAAGAGAAAGCAAAAA AAAAAAGTTTTACGTAAAGGAGAGTAATGGTCAAACCAAGATGTTGGACAAATGCTTGGTCTACTTCCTTAGTTAGTTTA CCACCACATAACATATAATAAAAAGAACAATAAGAAGAGACAGGGAAGAGAATATCAAAAGAAGTTTATCACGGTTCATA TTTAACAACTTGGGCTACTTCCAGTCTCCTAACCACAGCTACAAATGTTCACTAATTTCACAAACTAAACAAGATGTG
CDS sequence (LotjaGi1g1v0597100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACAGCAACATGCTCGTCAACTGCTCCAACTGCCGAACGCCGCTGCAACTGCCTCCCGGCGCCGGATCCATCCGCTG CGCCCTCTGCCAGGCTGTCACTCCCGTCCCCGACCCACGCGCTCTCCCTCCCCAGCCGTACGCGGTTCCAGGTCCCTCGC CGAGCTTCCACGCGCCGCCCGGTCCTCCGCCGAGCTTCCACGGCCGCAAGAAGGCCGTGATCGTCGGCATCTCGTACAGG TACTCGCGCCATGAGCTCAAGGGATGCATCAACGACGCCAAGTGCATGAAATACCTTCTCATCAACAAGTTCAAATTTCC AGAACCTTCCATCATCATGCTCACCGAAGAAGAAGATCCCCGTGGCCCAAAATTCCCATCCAAGCACAACATCCGGATGG CAATGTATTGGCTTGCACAAGGATGTCAACCTGGAGACTCCCTGGTTTTTCATTATTCTGGTCATGGGTCACAGCAAAGG AACTATAGTGGTGATGAAGCTGATGGATATGATGAAACAATTTGTCCTTTTGATTTTGAAACACAGGGTATGATTGTAGA TGATGAGATCAATGCAGCGCTTGTAAGACCTCTTACTCATGGGGTTAGGCTGCATGCGCTAATTGATGCCTGCCATAGTG GCACTGTTCTAGATTTGCCATATCTTTGCAGAATGAACAGTTCTGGACATTATGCATGGGAGGACCATCGCCCTAGGTCA GGTGTATGGAAGGGATCAAGTGGTGGAGAAGTTATCTGTTTTAGTGGATGTGACGATCATCAAACCTCTGCAGATACATC TGCACTGTCGAAGATTACATCGACTGGGGCCATGACGTTTTGCTTCATACAAGCCATAGAGCGCGGTCATGGAGCCACCT ATGGTAGCATTCTTAATGCAATGCGCACTGCCATAAAAAATGTTGGCGGCAGTGGGGGTGGGGGTGGTGATGTGGTGACA TCTCTTCTCTCCATGCTTTTGACCGGCGGTAGTGGTCTTTCTGTTGGTGGACTGAGACAGGAACCGCAGCTAACAGCTTG TGAAATGTTCGATGTCTATAGCAAACCTTTCTCATTGTGA
Protein sequence (LotjaGi1g1v0597100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYSNMLVNCSNCRTPLQLPPGAGSIRCALCQAVTPVPDPRALPPQPYAVPGPSPSFHAPPGPPPSFHGRKKAVIVGISYR YSRHELKGCINDAKCMKYLLINKFKFPEPSIIMLTEEEDPRGPKFPSKHNIRMAMYWLAQGCQPGDSLVFHYSGHGSQQR NYSGDEADGYDETICPFDFETQGMIVDDEINAALVRPLTHGVRLHALIDACHSGTVLDLPYLCRMNSSGHYAWEDHRPRS GVWKGSSGGEVICFSGCDDHQTSADTSALSKITSTGAMTFCFIQAIERGHGATYGSILNAMRTAIKNVGGSGGGGGDVVT SLLSMLLTGGSGLSVGGLRQEPQLTACEMFDVYSKPFSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 359 | 359 | 1.9E-202 | – | |
| PANTHER | 1 | 359 | 359 | 1.9E-202 | ||
| TIGRFAM | 6 | 35 | 30 | 3.8E-15 | ||
| Pfam | 9 | 33 | 25 | 8.6E-11 | ||
| Gene3D | 26 | 359 | 334 | 3.4E-100 | – | |
| MobiDBLite | 41 | 63 | 23 | - | – | |
| Pfam | 70 | 346 | 277 | 1.2E-59 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0597100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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