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PF06943

Source: Pfam

Description

LSD1 zinc finger

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 25

Transcript Name Description Predicted domains Domain count
Lj0g3v0054379.1
– PREDICTED: protein LSD1-like [Cicer arietinum] gi|502086399|ref|XP_004488206.1|
Domains
8
Lj0g3v0054379.2
– PREDICTED: protein LSD1-like [Cicer arietinum] gi|502086399|ref|XP_004488206.1|
Domains
8
Lj0g3v0054379.3
– PREDICTED: protein LSD1-like [Cicer arietinum] gi|502086399|ref|XP_004488206.1|
Domains
8
Lj0g3v0054379.4
– PREDICTED: protein LSD1-like [Cicer arietinum] gi|502086399|ref|XP_004488206.1|
Domains
6
Lj0g3v0087929.1
– Lsd1-like protein [Medicago truncatula] gi|357519449|ref|XP_003630013.1|
Domains
5
Lj1g3v3608320.1
– PREDICTED: metacaspase-1-like [Glycine max] gi|356495863|ref|XP_003516790.1|
Domains
11
Lj1g3v3608320.2
– PREDICTED: metacaspase-1-like [Cicer arietinum] gi|502103244|ref|XP_004492236.1|
Domains
10
Lj2g3v1985010.1
– PREDICTED: protein LOL1-like [Vitis vinifera] gi|225427256|ref|XP_002281099.1|
Domains
5
Lj3g3v2004940.1
– PREDICTED: protein LOL1-like [Vitis vinifera] gi|225427256|ref|XP_002281099.1|
Domains
8
Lj4g3v0341200.1
– PREDICTED: metacaspase-3-like isoform X1 [Cicer arietinum] gi|502142133|ref|XP_004504807.1|
Domains
7
Lj4g3v0451190.1
– PREDICTED: protein LOL2-like [Glycine max] gi|356521358|ref|XP_003529323.1|
Domains
6
Lj6g3v1105040.1
– PREDICTED: protein LSD1-like [Cicer arietinum] gi|502086399|ref|XP_004488206.1|
Domains
7
LotjaGi1g1v0597100.1
– Metacaspase-1; TAIR: AT1G02170.1 metacaspase 1; Swiss-Prot: sp|Q7XJE6|MCA1_ARATH Metacaspase-1; TrEMBL-Plants: tr|A0A072TYB8|A0A072TYB8_MEDTR Metacaspase-like protein; Found in the gene: LotjaGi1g1v0597100
Domains
9
LotjaGi2g1v0415300.1
– Zinc finger protein LSD1; TAIR: AT1G32540.2 lsd one like 1; Swiss-Prot: sp|Q93ZB1|LOL1_ARATH Protein LOL1; TrEMBL-Plants: tr|I3S255|I3S255_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415300
Domains
6
LotjaGi2g1v0415300.2
– Zinc finger protein LSD1; TAIR: AT1G32540.1 lsd one like 1; Swiss-Prot: sp|Q93ZB1|LOL1_ARATH Protein LOL1; TrEMBL-Plants: tr|I3S255|I3S255_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415300
Domains
6
LotjaGi4g1v0035500.1
– Metacaspase-1; TAIR: AT1G02170.1 metacaspase 1; Swiss-Prot: sp|Q7XJE6|MCA1_ARATH Metacaspase-1; TrEMBL-Plants: tr|A0A072UNC8|A0A072UNC8_MEDTR ICE-like protease (Caspase) p20 domain protein; Found in the gene: LotjaGi4g1v0035500
Domains
6
LotjaGi4g1v0035500.2
– Metacaspase-1; TAIR: AT5G64240.2 metacaspase 3; Swiss-Prot: sp|Q9FMG1|MCA3_ARATH Metacaspase-3; TrEMBL-Plants: tr|A0A072UNC8|A0A072UNC8_MEDTR ICE-like protease (Caspase) p20 domain protein; Found in the gene: LotjaGi4g1v0035500
Domains
6
LotjaGi4g1v0055900.1
– Zinc finger protein LSD1; TAIR: AT4G21610.1 lsd one like 2; Swiss-Prot: sp|O65426|LOL2_ARATH Protein LOL2; TrEMBL-Plants: tr|A0A0R0J664|A0A0R0J664_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055900
Domains
7
LotjaGi4g1v0188000.1
– Zinc finger protein LSD1; TAIR: AT1G32540.2 lsd one like 1; Swiss-Prot: sp|Q93ZB1|LOL1_ARATH Protein LOL1; TrEMBL-Plants: tr|I3S8Z8|I3S8Z8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0188000
Domains
8
LotjaGi4g1v0188000.2
– Zinc finger protein LSD1; TAIR: AT1G32540.2 lsd one like 1; Swiss-Prot: sp|Q0J7V9|LSD1_ORYSJ Protein LSD1; TrEMBL-Plants: tr|I3S8Z8|I3S8Z8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0188000
Domains
11
LotjaGi4g1v0390200.1
– Zinc finger protein LSD1; TAIR: AT4G20380.1 LSD1 zinc finger family protein; Swiss-Prot: sp|P94077|LSD1_ARATH Protein LSD1; TrEMBL-Plants: tr|I3S0N1|I3S0N1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0390200
Domains
6
LotjaGi4g1v0390200.2
– Zinc finger protein LSD1; TAIR: AT4G20380.1 LSD1 zinc finger family protein; Swiss-Prot: sp|P94077|LSD1_ARATH Protein LSD1; TrEMBL-Plants: tr|I3S0N1|I3S0N1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0390200
Domains
6
LotjaGi4g1v0390200.3
– Zinc finger protein LSD1; TAIR: AT4G20380.1 LSD1 zinc finger family protein; Swiss-Prot: sp|P94077|LSD1_ARATH Protein LSD1; TrEMBL-Plants: tr|I3S0N1|I3S0N1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0390200
Domains
6
LotjaGi6g1v0213800.1
– Zinc finger protein LSD1; TAIR: AT4G20380.2 LSD1 zinc finger family protein; Swiss-Prot: sp|Q6ASS2|LOL3_ORYSJ Protein LOL3; TrEMBL-Plants: tr|I3SDN9|I3SDN9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0213800
Domains
7
LotjaGi6g1v0213800.2
– Zinc finger protein LSD1; TAIR: AT4G20380.2 LSD1 zinc finger family protein; Swiss-Prot: sp|Q6ASS2|LOL3_ORYSJ Protein LOL3; TrEMBL-Plants: tr|I3SDN9|I3SDN9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0213800
Domains
7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 4.00