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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0597400 |
| Transcript ID | LotjaGi1g1v0597400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent protein kinase; TAIR: AT3G24110.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q9LRN6|CML22_ARATH Probable calcium-binding protein CML22; TrEMBL-Plants: tr|I3S8Q5|I3S8Q5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0597400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:113701269..113707054) extracted from Lotus japonicus Gifu genome v1.2.
GTGGATTTGTTATATCAGGAGATAAACTATTGTTTAAGTACCCGTTTGGAAATGGCTGAAGAGAGAGAGGAGAGGGAACA CCTCACTCAAAGCAAAGATGGCATGGAATCCACTTTACTTCCTTTTTCTGCTTTCCTCTTTACGTTTCCCTAAATACAAA TACATCATCATCGACTTGTTTTGCATAACATAGGCATATCCCACTTCTTCCCCTTCCGCGAGCCCTTTACTTCTTCTCCC AATCCGAAATCTGTAAGTTCCCTTTCTCTTGTTTGATCTGTCACATGTCTTGTTCACCATTAAATCGTGTACTTTATCTT GTTGAATTGGTGATCCAATCAAATACACTATTGTTCAGGGTTTTAAATTGCTCCTGCTGTCATACCGGACAAATGCGGGT TGATGCATTGCGAGCCGCAATTTAAAATCCTATTGTTTGATAATTACTCTACAGTTTTCAAATTGAAATTATTTATTTTG ATCCTTGATCATTGTTAAAATTTGCTTAATTTTAGAGTTGAGGGGTTTATTCTATGTGGCTGGTGGAAATGAACACATGA ATAATGTTAAATATGAGGGTGTGTTTGGGAAAATAGCTTAATTAAGCACTTATGGCCTTAAGTGCTTATTCATAGGCACC ATTTGGAAGAGCTTTAAAACAACTTATTTGAGTTTTTTCTATAAGATAAACAAAGCTACTTTGAGAAATGTCTCAAAATA AGTTAGAAATATGTTGTAGATAAACATAACCTCTTATTTTTAAGCTGCTCTTAACAGCTTATGAAAATAAGCTCAAAACA TCTTATAGGTAGGTCATAAACTATTCCATAAGCACGTATGCTAGCTCAAATAAGCTCTTCTAAACGGGTTCATACCCTAT ATATATGTGTGTGTGTTTGTGTGTTTTTATTGCCTTTGAGTTTCCTTGTCCCTCATTCCAAGGATTGTTCGTGCCTGTTT GGCTTTAACTAATTACATTTTCTGTTTACAGTTTTAATCACATAAGTACTGCCTTAATTTTGAAATTAAAACTGAACATA GAAACCAAACAGACCCTTAATCTTACCTTTTTGCATTTTTCTGAAGTCTTTAGCCAGTTAAATGGGAGCCACAATGTGCT GTATTACTAAGTCCAGCGAGAGAAAGAGCTTGGATGGGAAGCTTGGAAAGAAAATTGCTGAAATAAGAAGAAATAAATTT GGACAGAGCAGATTGAAAACCGTTGATAGCATAGTTATGCTGTTCCCCATGTTCCACGAGCGACTAAAAACTTTAAGAGG AATGTTTGAGCAATTTGGTGAGTTTCAAAAACAATCCAAACATTCTTTTCTTTATAAAAGCATCTGCTCTTAATTTCTTA TAGAAAACTAAACTAAAACACTTATGTTGTATCTTTCACAGATGAGGACTCTAATGGATCCATAGAGCCCAATGAACTGA AAGGGTTCTTAGATCATCTGGAACTTCATCTTCCAGAGCAGGAGATTGAGAATCTTTTTCATTACTGTGATATAGATGGA AGCAAGGGCATACAGTTTAATGAATTCATTGTTCTCCTATGCCTCATCCATCTCCTAACAGAACCTTTATCCTATGATAC TGTACTCATCTGAAACTTGATTTTATGCTTTCTTAATCTTGAATTTGGTACATCTGCTTCAACTGTGCACTCACTATATG ATGACTATTTTTTTCAGTCACCAAAGGCAGAGTTAGCAAAGCTTGGAGAAGTTTTTAATACCATAGTTGAAGTTTTTCTG TTTTTTGATAAAAATGGTGATGGGAAGCTTAACCAGAAGGACATGATCAGAACACTGAATGAGACTAACCCCCGGGAAAG ATCCCCAGCGCGCATCACTAAAGATCGATTTAGTATATTATCTACATAATTTTATTGCTTCTTTTATAACATGAGCTTTT GTTTCACTTTTTTTTCCAACTTATATTTTTTGCATTACCTTTTTTTACTTCATTTCCGGTTTTGTCTTCCTCGCAGGAGA AATGGACTGGGACAAGAATGGGCAAGTCACATTCAGGGAGTTTCTCTTTGGTTTCATTAATTGGGTCGGGATTGATGTTG ATGAATAGATGCATGAACTGAAGTCATATTGCGGGTATGACTGCTTCAAGTTAGATTATGTTGAATGTGTATAAACTTGA ATTTTCTCATTTTCCTAAAATTGTGTTGGTGAAATTTACGCACTCTGTGGCATTGAGAATTAAAAAACAGTTATGACTAC AAATATATAATTTGAGTGCTGCAGCTGCTTCAGAAGAAGGATACACTGATATATTAAGCTTCTTATATATACAACTTAGC TTAGATAATAAGCAGATTAAATAGATAAAATATCAATAGACAAAGAAGAAAGTGCTTCGTCTATTTACAAAACTTCGAGT TCGCATTAGGTCACTCTAAATTCTACTGTAACTCCTTATTCCTTACTGTATTCCTAGAGCTTGGATTCTCTTAATCATTG ACAGAGAACTAGCATTTCTTTGCCTCCATTCTTCCCTGTTCTCTTTGTTTTTCTGGTTGAGTAATTTATCATTTCCATCA AGGATGCTCACTATTTGTCTCATGCTTGGTCTTAATTGTGGGTTGCAGCGGGTGCACACAATTCCTAATCTTACCAATCT CATTAGTTCTTTGTGGTTGTACTCTCCATTGAGTCTTATGTCAGCTAATTCCTCCAATGGTCTTTTTCTCATTTCAAATT CATGAACCGTCTTCACCAAAAGCACTTCCTGCTGCCGGAAATCCACTGCCATCTGTCCACTGACAACTTCAAGCACCACC ACACCAAAACTATAAACATCAGCCATTGTGGATGCTTCACCGGATTCCACATATTCCGGTGACATGTAGCCGAAAATCCC CCTAGCCGATTTCCTAGAGTCACTGGTTACATGATGGCCATGTTCATTCCTTGACAAAAATTCAGCTAGAGCAAAACTGC TGAGTCTTGGGTTCATATCTGGTTCAAGAATGACAGCTGAAGAGGTAATGTTTCTGTGGATCACTTGTTCATCCCACTCC TCATGTAGATAGAGAACTGCTGAGGCAAGTGCTTTCACTATCTTATACCTGTGATGCCATTGGAGGACAGAATAGCCAAT TCTACCATTACTATGATGGAGAAGTTGTTGGCTGAGGATTCTACTAGCTGAGTAATCATAAACAACAAGCATCTCTCCTT GCTCAGTGCACCATCCACGGAGTTGCACCAAATTCCTGTGGCGGAGCCTTCCTACATTCCTTAGTTCATTAGAGAATCTA TCACGCAGTGCAGGACATGTCTTCATCCCCAGGCGTTTCACCAAAACATGGCAACTGTCATCAAGGATGCCATGATAAGC AGTTCCAAAGTCTAGCTCTGCAACCCTTCTTGAATCTGAAAAGTTATCTGTAGCAGACACAATCTCCTTGTATGATATTT CCCTTGGAGTTTCAACCATAGGAAATGATGGCTGGTGATGCTCACTCTTAGAAGAGATGATTTCACTGTTTTTGTTTTCA GCAGTTACATATACAGTTTCTCCTGCTGCTGTGAAATAGTTGGATGATGTATAGTTGGTGACAATGCTAGCATTCTCTGT GGCTGAGCTAGTGCCACTTGTGCTTCTGGGACTAGTCTCAAATGGGCAAGGCAATTTGATGTAAAGAGGGTTGGAGAGAA ATGAAGGAAGTGGTGGCAGTTTGAAAGAAATGTCAGAAAGTGCTTCCACAACCCATTTCATGCTTGGCCTCAATTGTGGG TCATTGAGTGTGCAGAGGAGGCCTATGTGAATGAGATGCTGCAACTCAGATAGCTTGTAGGATCCATCCGGTAGCCGAGT ATCGGCCGCCTCCAAAAGCTTCCCTTCATCGGAAAGCCTTCTGATCCAGTCAAGCAAAATGATTTGATCATCCGGGTATG TGAGATCTATTGCTCTCCTTCCAGATACCACTTCTAGCACAACAATTCCAAAGCTGAAAACATCAGATTTGGAGGTAGCA GTGCTTGGTTTCTGCAAGCTTTCAGGTGGAAGATACCCAATAGTGCCACCAATCCTTGATGTCTCTCCCAACCTGAAATG ATAAACTCTGCTTGATGTTTTCCTATTGCTGTACTCCAGCTCATGTTCTAGCCACCTCGCCATGCCGAAGTCACCCAAGC GAGCGTTGAAATGGGAATCAAGCATCACATTGCTGGTTTTCACATCCCTGTGAATGATTTGAGTTTCTAGCTGTTCATGC AAATAATACAGTGCCGCACACAAACCTTTCACAATTTTCCCTCTTTGTCCCCAGTCAAGAGGCTCAGACTTCAAATTCTC AGGCCGGCGGAAGAGTAAACGATCGAGGCTGCGGTTAGGCATGTAGTCATAAACAAGGTACAACTGATCTTCATGAACAC ACCAACCCCTCAGCCTCACGAGGTTCTTGTGGCGAAGATCCGCCACGGCTGTTAACTCAGCTGCAAAACTCTTCTCAAAC TGCTTCCCCTTCCCTGCTAAGCAGCATTTCACAGCAACCACAGTTCCATCACTCGGCAAAACAGCTCTATACACTCTGCC AAACCCTCCACTCCCAAGAACCTCATCTTCACTAAAACCATTAGACCCTATGAAAATCTCTGCATAGCTGAAGATCCTTG GATTGTCCCTGCCAATCTTGACAGCAACCTGCACACCATCCATGTCATGAAACAACGTGCTGGAATTCTTCTTCCTCCAC CACCCTGAGCTGCATAGCTTGCTCAAAGAATCATGAAGCAAAGCAAGAACTTGCTCCCCACAAGCCCTGTGAGGCTTTCT GGCCTGAGCTTGTTCCTTTGCAGATTGAAAGGCTTGTTGGACACCCATTTCAGGTTGCTTCAGATCACCTGAATGTGGTG GCAAAACAATGCAGAGACGTTTGAGCTGCATGGCTATGGTTTTTAGTGAATATACTTTGTGAGAAAGCAAAGCTTTCTTA AAATGGATATGGCAATGATGTTGAAGAGGATGTTGAAGGGGTTGCTTGGTGTTTGGTGAAGTCGGCATTTAATTCTTGTT GTGGCCTGGCTATTTTGTCAACGCGTTTAGTTTGCTGAGGTGTGTTGTGTACAGCTATCCACCAAATTGGAACCTACCTC TGAGATTTTGCCATTAATCCTCACAGGCGTTTCATTTTTTTCACGGGAAATATAATGTTGTGTGAACTTTTGGATTAGTT CAACCAGTGGTTTCACACTTAAACGTTAACATGAAACCATAAAGTAAGGGTTTTTTATTTTATGTCAACTTGGTTGGCAC AACTGGTCACAAGTTTCGAATTCAACTTACATCTTATAGGTCATAAGTGGGTCTCTACTGGCTTCTTCAGAAGTGTTTTT TCTTCATTCTACCATTTTTGTAAAAAAATAAAGGTACAGGTTTCTCCGTGACGAGCTTAAAAATGAGTGAAAATGAAAGA GGAAAAAGATTAATCTCACTTCTAGCTCTATTTAAATTAGATGTCACTGTCTGTGACTGTCCCTCTCTGCCCACATGTTA TATACATTTCTTTACCATTTTTTTGTTAGACGTGTTTTGTTTACAAGACCTTCATAATTCAGAAGACCGGAATTCACTTT AATGTTCTGATTGTTTCTAGTAAAAATGGAAGGAATGATAATAGGAGGAAGGTATAAGGGTGGAATAATGAATCTTTTGT GGTTTGGATGAGGGAAAATAAGGGAAAGAAGAATATGTCAATATGGGTAAGTATCACACAGAAGAGTTTTCCTCTCAACC TTGTGGAGAACTAAAGTGAGAGGATG
CDS sequence (LotjaGi1g1v0597400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGCCACAATGTGCTGTATTACTAAGTCCAGCGAGAGAAAGAGCTTGGATGGGAAGCTTGGAAAGAAAATTGCTGA AATAAGAAGAAATAAATTTGGACAGAGCAGATTGAAAACCGTTGATAGCATAGTTATGCTGTTCCCCATGTTCCACGAGC GACTAAAAACTTTAAGAGGAATGTTTGAGCAATTTGATGAGGACTCTAATGGATCCATAGAGCCCAATGAACTGAAAGGG TTCTTAGATCATCTGGAACTTCATCTTCCAGAGCAGGAGATTGAGAATCTTTTTCATTACTGTGATATAGATGGAAGCAA GGGCATACAGTTTAATGAATTCATTGTTCTCCTATGCCTCATCCATCTCCTAACAGAACCTTTATCCTATGATACTTCAC CAAAGGCAGAGTTAGCAAAGCTTGGAGAAGTTTTTAATACCATAGTTGAAGTTTTTCTGTTTTTTGATAAAAATGGTGAT GGGAAGCTTAACCAGAAGGACATGATCAGAACACTGAATGAGACTAACCCCCGGGAAAGATCCCCAGCGCGCATCACTAA AGATCGATTTAGTATATTATCTACATAA
Protein sequence (LotjaGi1g1v0597400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGATMCCITKSSERKSLDGKLGKKIAEIRRNKFGQSRLKTVDSIVMLFPMFHERLKTLRGMFEQFDEDSNGSIEPNELKG FLDHLELHLPEQEIENLFHYCDIDGSKGIQFNEFIVLLCLIHLLTEPLSYDTSPKAELAKLGEVFNTIVEVFLFFDKNGD GKLNQKDMIRTLNETNPRERSPARITKDRFSILST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 191 | 190 | 7.4E-82 | – | |
| PANTHER | 2 | 191 | 190 | 7.4E-82 | – | |
| Gene3D | 35 | 193 | 159 | 3.0E-23 | – | |
| SUPERFAMILY | 46 | 176 | 131 | 6.78E-24 | ||
| ProSiteProfiles | 53 | 88 | 36 | 12.477 | ||
| Pfam | 57 | 116 | 60 | 1.5E-8 | ||
| SMART | 57 | 85 | 29 | 0.019 | ||
| CDD | 58 | 118 | 61 | 3.72756E-13 | ||
| ProSitePatterns | 66 | 78 | 13 | - | ||
| ProSiteProfiles | 89 | 124 | 36 | 9.269 | ||
| SMART | 93 | 121 | 29 | 3.6 | ||
| ProSiteProfiles | 143 | 178 | 36 | 9.353 | ||
| SMART | 147 | 175 | 29 | 0.34 | ||
| Pfam | 148 | 164 | 17 | 0.0066 | ||
| ProSitePatterns | 156 | 168 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi1g1v0597400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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