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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0599900 |
| Transcript ID | LotjaGi1g1v0599900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carotenoid cleavage dioxygenase; TAIR: AT2G44990.3 carotenoid cleavage dioxygenase 7; Swiss-Prot: sp|Q7XJM2|CCD7_ARATH Carotenoid cleavage dioxygenase 7, chloroplastic; TrEMBL-Plants: tr|H6S0L9|H6S0L9_LOTJA CCD7-like protein; Found in the gene: LotjaGi1g1v0599900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:114441713..114446346) extracted from Lotus japonicus Gifu genome v1.2.
GGAAATACACAATGCAAAAAAATTGTACTTAGCAACTGTTCCATGTCCACATATATAAATAGCACATATTCGTTGCCACC TTCATATGCCAACAACACCCTCTCTCCCAAAAATGCAAGCCAAACTTGTTCACAACAGCCCAACATACATTCCTCCCCTC ATAAGGCCACCTCCGGTAAACCAAGCCGCCTTGCCGCTGGTAACCAAACCTCGAGCAGTGTCCATATCCGTACCCATTAC CAGCATAGTCGTTCCAGTACCGGTTTCAATTCCGATTCCAGATTCAACGCCGCCATCTGTAGAGCTTGATGACTCCATAG TTGCCCCATGGGACTACCAATTCTTATTCATGTCACAACGATCGGAAACCACTCAACCTATCACCCTACGTGTTGTGGAT GGTGCAGTACCGGCCGATTTTCCGACCGGTACATACTATCTAACCGGACCTGGGATTCTCTCCGACGATCACGGATCGAC GGTGCATCCCTTGGACGGCCATGGATACCTAAGAGCATTCACTTTTGATAATAATGTTACTAACAAAGTCAAATACATGG CTAAGTACATTAGAACCGAGGCTCAATTGGAGGAGCATGACCCTAAGACCAACACGTGGAAATTCACTCATAGAGGTCCA TTTTCTGTGTTGAAAGGTGGGAAAAAGGTTGGGAATACTAAGGTCATGAAAAATGTGGCTAACACTAGTGTGTTGAAGTG GGGGGAGAAGCTCCTGTGTATGTGGGAAGGTGGTGAACCATACGAGATGGAATCCGGTACATTGGATACGATCGGGCGAT ACAACATGATGGACGATTGTGATTTGGATGATCATGAGAACCCCGGTGATCATGATGTTTGGGATGTTGCTGCTAGCTTA CTCAAGCCTATATTGTATGGTACGTATATTGTTTCTAAACTCTTCTATCATATGCTATGTTTAAAAGCAGATTTAACATC CTCATTAATCATGTTTTTACAACTAATATTCACCTTCAACACATGTTATTTATAATATGCTTTTTACATGCTAAAATTAA TTAACAAAATAGCCCCTTGTAACTTGTTAATTATGTTTTTCTTAATGACTCAATAACTATAACCTAGCTCATACTCTCTT TAGAAACTACTTTGATCTCCTTCCTTTTTCATATATAAAAACCAGAGTTTGAATCATAGACACTACATGTGTATGACATG ACAAAATGGGTACAATCACAAGACACAAGAAAGGTGACCAACGAGGTGATTATGATGTTGAAATAATCAATTTTTTGTTT GCCCAAAGAATAATAAACAACTTGGGTGCGAGTTGTTAATTGGTTGTACAGACAGTAAGTTTGGGACTCCAATTAAGCAA CCCATTATAGTGCTTCCAATATTATTCCAAACTCCAGTCGGCACAAATATGACTAAGATAATTTTTATATATCAGAAGAT TATCTTCGCCCCTTAAACTAGTTTTTAAGGTAGAGTTAAGTCTTTTAAATTCTAATATTACATTCCAAAATAAAGAACAC AGGTTTACAAACAAAGTTGCCCAAGGCATACAATTCCAAGCTTCATGCGTTAGCTATGGAGTACTTAATTGTGTCCCAAT GTATATAGAAAAAAAAAGTGTACCCTTAAAACAGACTATTGTGAAGGATATTCTAGATTTCAAGGGGAAATTAAATATAG AATACTTTATTTATACACGTTACCTCAGAAAACTTCAATTAATTTATACAAGCAGCTGTATAACATTGAATTTTACGAAT GGATGTTCGTACAAGACAATAGTTTAACTGTGACATAATATGAAAATATTTGATTAATTTGTCATTTTTTTATTGGATGC AGGAGTGTTTAAGATGCCCCCAAGGAGACTCTTGTCTCACTATAAAATTGATTCCGTCAGGAGCAGGCTACTCACGGTAT CATGCAATGCAGAGGACATGTTGCTTCCACGCAGTCATTTTACATTCAGTGGTAATTAATTAGTAGTAAAATAAAATGAG AAATATTCAACTTCCTTTTTTTGTAAAATTAAAAGTTTGCACACCTAGATTTGATTTTAAATTTATTTTCTTAACAAGTA TTTTTTTTATATGCAGAGTATGATTCTAATTTCCAGTTAGTACAGAAGCAAAAGTTCAAAATCCCAGATCACTTGATGAT CCATGATTGGGCCTTCACGGATACCCACTACATAGTATTTGCCAATCGCATCAAACTTGATATACCAGGTTAGAACTTAT TTGTGCTTTCTACTACTTGAGTTTCTTCACTAATTTTTAAAAACATTTAAGAAAGTTCTTAAACTAAAATTAAATAATAA TTTTCATATGTCTGTTAACCAGTCACATTTCAGAGACATGAAACATTTATTAATTTTATTTTCTTTAAGGGTAAAATATG TTCAAGGTCTAGGATCACATCAAATAAGTCCTTAGAAATTTTATTACTTCTTGTTCTTAAAAAAAAATTAGTTCAAATGA ATACAAGTAATCCAAGTGGGTTGATGTAGTCATTCATCACTTCGTTTCTTAAGCAAGTGGTTGTGGTTCAAATCTTAACT CTTGTGAATGAAAAAAAAAAACTCTTTACCCAGTCGTACTGCTTAATGCGTGTAGTCTGACGACTATCGGCTGTGGAAAT ACACTTTGGTCAAGAAAAAAAAACATGAGTACAAGTGATGTTATGGTGCCTCCACATGTCCAGCCCACATTGACATTTCA CATGAGTACTTTTGGTTCTTCTAAAAATTCTTTAATCACTGTTAGCCATTCTTTAATTTGGAAGTTAAATAAAAGATATT GAATATTAACTCTTGATATGAATATTGTTCAGGATCAATGGCAGCAGTATATGGGACATCTCCAATGATAGCAGCATTAA AAGTGAACCCAAGTAAGAGCACATCACCTATATACTTGCTTCCTCGGTTTCCAGAAAATTCAAAATGCAAAGAGAGAGAT TGGAGAGTGCCAGTTGAAGTACCTTCACAGTTGTGGCTGATTCATGTTGGCAATGCCTTTCAAGTTACACATGCTCATGG GAATTTGGACATTCAAATACAAGCCACTGCTTGCTCTTACCAGTGGTTCAATTTCCGCAAATTGTTTGGTATGTAGTTTA TGTATATCTATAAATTAATGATTTGTGTATGAATGTGTATATGAAATATTCCAATAAGAGTTTAATCATAATTAAATAGA TTAAAATTTGAAAAGATAAAAATATGTGAAGTGTCTGATTGTATCAGTGTAAAACTATCTATATATATATATAACGGATA CCATGTGGTGTTCTTAATAGTTAATAGTTAATACACAACAAGTGTCTCTAATAAAATCTCCTTTTCTGGTTTATTATCAG GATACAACTGGCAAAAACAGAACCTAGACCCATCCATAATGAATATAGAAGGTGACAGTGAGTTATTGCCCCATCTTGTT CAGGTATTGATGCTCCTCTCTCTCTCTCTCTCCATGTGTTTATCAAGCAGCTTTTTGGAGTAAATAAAATAAGAAAATCT TTTGTTTAATCTTAGAGTTATGGAATGTGATGCAGGTATCAATAAGATTAGATTCTGACTACAATTGCCAAGAATGTGAT GTGAAGCCCATGCAGAAATGGAAGAAATCATCAGATTTCCCCATTACCAATCCTGCATTTTCTGGCAAGGAAAACAGATA TCTCTATGCTGCAACTACCTTAGGATCCCGCAAAAGCTTGCCAAGTTTTCCTTTTGATACTGTTGTTAAATTAGATCTAG TGAGTGATTCTGTGCAAACTTGGACTGTTGATAGTAGAAAATTTATTGGTGAGCCTATTTTTGTTCCAAAAGGAGACCAA GAAGATGATGGCTACCTTCTTGTTGTTGAGGTGAGTATGAATTTGACAAGTTCTTTGCTCCATATATAAATCCCAAAATG GTTCATCTGCATCAAGATTGTCTGCAGCTCCCTCATGCAGGATCTTGACCATTTGATTTTTATTTTCTAACGATTAAAAT TGTTACATGAATTAAATTTAATTAATAGAAAAAATTAACAATTAATGATGATGAGTTGTTCTATGTGCTGGAGAGGCGGG ATATATAGCAATTTCTAATGATGCCATTCATTATTTGTTTTGCAGTATGCTGTTTCTAAGCAGAGATGTTATCTCGTCAT CTTGAATCCAAGGCAGATAGGAGCTGAAGATGCCCTTGTTGCAAGACTTGAAATTCCAATGCATTTAAATTTTCCTCTAG GTTTTCATGGTTTCTGGGCACCTAATTGAAGTCCAAAATTAAATTACTGTAAAATATCTTTTGTAGTGAAAAAAAATTAT ATATTCAACGTTCTTACAATTGATAGTAGTGATATATGGATGTGTATAAATATATATTTTTTTCATGGACAAAGTTGGCC GTTCAAGGACGATCTACGACACTCAAGGCCAACGAGGGTAGAAAGTGATTGCCAGTGCGTAATGAGAAGACATGAACAAT GAGCGATTTCGAGCAAGGCTTAAAGGTGAAAGGATACATGAATGAACTAATTTTCCACCAGAACGAGAGATATTTCAAGA CTGTATAGGTGTGAGACTATACAGTTGAGGAGAACTTATAAGATTTGATTGATTATACTTATAGCAATAAGGAG
CDS sequence (LotjaGi1g1v0599900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAACAACACCCTCTCTCCCAAAAATGCAAGCCAAACTTGTTCACAACAGCCCAACATACATTCCTCCCCTCATAAG GCCACCTCCGGTAAACCAAGCCGCCTTGCCGCTGGTAACCAAACCTCGAGCAGTGTCCATATCCGTACCCATTACCAGCA TAGTCGTTCCAGTACCGGTTTCAATTCCGATTCCAGATTCAACGCCGCCATCTGTAGAGCTTGATGACTCCATAGTTGCC CCATGGGACTACCAATTCTTATTCATGTCACAACGATCGGAAACCACTCAACCTATCACCCTACGTGTTGTGGATGGTGC AGTACCGGCCGATTTTCCGACCGGTACATACTATCTAACCGGACCTGGGATTCTCTCCGACGATCACGGATCGACGGTGC ATCCCTTGGACGGCCATGGATACCTAAGAGCATTCACTTTTGATAATAATGTTACTAACAAAGTCAAATACATGGCTAAG TACATTAGAACCGAGGCTCAATTGGAGGAGCATGACCCTAAGACCAACACGTGGAAATTCACTCATAGAGGTCCATTTTC TGTGTTGAAAGGTGGGAAAAAGGTTGGGAATACTAAGGTCATGAAAAATGTGGCTAACACTAGTGTGTTGAAGTGGGGGG AGAAGCTCCTGTGTATGTGGGAAGGTGGTGAACCATACGAGATGGAATCCGGTACATTGGATACGATCGGGCGATACAAC ATGATGGACGATTGTGATTTGGATGATCATGAGAACCCCGGTGATCATGATGTTTGGGATGTTGCTGCTAGCTTACTCAA GCCTATATTGTATGGAGTGTTTAAGATGCCCCCAAGGAGACTCTTGTCTCACTATAAAATTGATTCCGTCAGGAGCAGGC TACTCACGGTATCATGCAATGCAGAGGACATGTTGCTTCCACGCAGTCATTTTACATTCAGTGAGTATGATTCTAATTTC CAGTTAGTACAGAAGCAAAAGTTCAAAATCCCAGATCACTTGATGATCCATGATTGGGCCTTCACGGATACCCACTACAT AGTATTTGCCAATCGCATCAAACTTGATATACCAGGATCAATGGCAGCAGTATATGGGACATCTCCAATGATAGCAGCAT TAAAAGTGAACCCAAGTAAGAGCACATCACCTATATACTTGCTTCCTCGGTTTCCAGAAAATTCAAAATGCAAAGAGAGA GATTGGAGAGTGCCAGTTGAAGTACCTTCACAGTTGTGGCTGATTCATGTTGGCAATGCCTTTCAAGTTACACATGCTCA TGGGAATTTGGACATTCAAATACAAGCCACTGCTTGCTCTTACCAGTGGTTCAATTTCCGCAAATTGTTTGGATACAACT GGCAAAAACAGAACCTAGACCCATCCATAATGAATATAGAAGGTGACAGTGAGTTATTGCCCCATCTTGTTCAGGTATCA ATAAGATTAGATTCTGACTACAATTGCCAAGAATGTGATGTGAAGCCCATGCAGAAATGGAAGAAATCATCAGATTTCCC CATTACCAATCCTGCATTTTCTGGCAAGGAAAACAGATATCTCTATGCTGCAACTACCTTAGGATCCCGCAAAAGCTTGC CAAGTTTTCCTTTTGATACTGTTGTTAAATTAGATCTAGTGAGTGATTCTGTGCAAACTTGGACTGTTGATAGTAGAAAA TTTATTGGTGAGCCTATTTTTGTTCCAAAAGGAGACCAAGAAGATGATGGCTACCTTCTTGTTGTTGAGTATGCTGTTTC TAAGCAGAGATGTTATCTCGTCATCTTGAATCCAAGGCAGATAGGAGCTGAAGATGCCCTTGTTGCAAGACTTGAAATTC CAATGCATTTAAATTTTCCTCTAGGTTTTCATGGTTTCTGGGCACCTAATTGA
Protein sequence (LotjaGi1g1v0599900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTTPSLPKMQAKLVHNSPTYIPPLIRPPPVNQAALPLVTKPRAVSISVPITSIVVPVPVSIPIPDSTPPSVELDDSIVA PWDYQFLFMSQRSETTQPITLRVVDGAVPADFPTGTYYLTGPGILSDDHGSTVHPLDGHGYLRAFTFDNNVTNKVKYMAK YIRTEAQLEEHDPKTNTWKFTHRGPFSVLKGGKKVGNTKVMKNVANTSVLKWGEKLLCMWEGGEPYEMESGTLDTIGRYN MMDDCDLDDHENPGDHDVWDVAASLLKPILYGVFKMPPRRLLSHYKIDSVRSRLLTVSCNAEDMLLPRSHFTFSEYDSNF QLVQKQKFKIPDHLMIHDWAFTDTHYIVFANRIKLDIPGSMAAVYGTSPMIAALKVNPSKSTSPIYLLPRFPENSKCKER DWRVPVEVPSQLWLIHVGNAFQVTHAHGNLDIQIQATACSYQWFNFRKLFGYNWQKQNLDPSIMNIEGDSELLPHLVQVS IRLDSDYNCQECDVKPMQKWKKSSDFPITNPAFSGKENRYLYAATTLGSRKSLPSFPFDTVVKLDLVSDSVQTWTVDSRK FIGEPIFVPKGDQEDDGYLLVVEYAVSKQRCYLVILNPRQIGAEDALVARLEIPMHLNFPLGFHGFWAPN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 74 | 628 | 555 | 2.0E-195 | – | |
| PANTHER | 74 | 628 | 555 | 2.0E-195 | ||
| Pfam | 89 | 629 | 541 | 1.7E-94 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0599900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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