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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0600700 |
| Transcript ID | LotjaGi1g1v0600700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid-lipid associated protein PAP / fibrillin family protein; TAIR: AT4G00030.1 Plastid-lipid associated protein PAP / fibrillin family protein; Swiss-Prot: sp|O81304|PAP11_ARATH Probable plastid-lipid-associated protein 11; TrEMBL-Plants: tr|A0A1J7GKP6|A0A1J7GKP6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0600700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:114533027..114538586) extracted from Lotus japonicus Gifu genome v1.2.
GAGATTTTTAGTTTCAGTTCTCAACCGCCAATTTGTTTCAAGTAACGCCAATGGAACTCAATCACCACCACATGCTCCGA TGGCCACCACCTCCACCCTCTTTCTCCTCCCCAAACCCTTCACCTCTCAAAACCCTAACAACAAATCTCGCTACCCTCAC CCGCGTTTCACCTGCTGCTCCGTCACAGCCCAATCCCTCCCCGCCAAGGACCACCTCCTCACCCTCATCTCCGACCAGGA ACGCGGCATCAAGACCCAGACCGACCCGGCCAGGCGAGCCTCCATCGTGGAGGCGATCGACGCCTTGGCCGCTGTCGGCG CCGGCTCCGTCACCACCGGCGACTCGCTGTCAGCCACGTGGCGGCTGCTGTGGACCACCGAGAAGGAGCAGTTATTCATT GTTGAGAAGGCTCACTGGTTCGGAACCCGTGCCGGTGATGTGTTGCAGGTCATAGATGTTCCGGGAAGAACCCTCAACAA CGTGATCACGTTTCCTCCGGATGGAGTTTTCTTCGTTCGGTCGAGTATTGAGATTGCGTCGTCGCAGAGAGTTAATTTCA GGTGAATGATTGATAATTGATTTTGATTTTGGTGTGAATGTGATTCTATTTCTATCAGTTGTTGTTATCTGATTTTGATA TTTTCTGCATTTTGAATTGTTGTATTGTTCAAGGGTTTTGGTAGTTGTAAGTTATAACTAAGGTAGATGGTTAGATCTTG CATGTTTCGAGCGAAGTGCGAGATGAGTAGAAAGAAAAGAACATTTTGTCATAATGAGTCAGCATGCTTATGAATTCTTG TTTGGATTAGTTGTAGTAACTACCCGAGTCTAGGTAAATTTTGATATAATTCTAGTTTATTTTTCTTCGCTTTGGAGCAT TAATCAAGTTTGAAATTGTTGGAGATGTAATTTGAGACCATTTAAATGTCACTATTTATGTGTTGTCGCGCATAAGCTTT AGGGGGAGTTTATGTTTGCTGGGGTATTACTATTAGAGATACCATCCTCTGTGACTTTTCTGTGGTTATTCCGCTGTTGA GTTTCGTAAATTTTGGAAGTCTTGTGTTTGGTAAACTCACCCATCCTTAGTTTTCAATGACGGTCTTCACCTATTGTGTT GGCTGTGACTGATTCCTACCACTGAAACCATGGACTTGCATGACTGCGTGCTAGAGATAGTATAAAACCATTTATTTGCC TTTACCTAAGAGCTTAGTATTTTGGGGAAGGTGGTCCTTGTCATTGATGTAAAATGGCATCATACAAGCTTCTCTATGTG TGAAACTTTATCTACTTGTTGTTAGTGAACCGAAACTATATTTATAGAGTTTAAAACAAGACATATTTCTATTAACTATG AAGACTGATATTGGTTGTTTTAGATTTACTAGTGCAGTGTTACGTGGGAAGAACTGGGGAATACCATTGCCACCATTTGG ACAGGGTTGGTAAGTACATAATTTTACCATGTAGTTGAAGTAAAATTCAGTTTAATTATTTAGGATGTTTCTGTTATATA TTCCTATGTGGTACATTACATGCTGGCCTATTATTTGAGTGCTTGGTAGGGATGAAACTAAATTGAAGACTCGGAAATGT AGACCAAAATGATTATTAGTGTTAGAATTTAGGTTAAATTACTTCATAGGTTCCTATAGTTCTATAAAAACAAAATTAAT TTATTTCCTAGTTTAAGTTTTTTTTTTTTTTAAATACTCCTCATTGGAATTTTTTGTTACTATTTAGAAAGTTTCTCTTA TTTAGGGAGAATACCATTATTCAAGATTTATATATGTATTCTGATTTTTCTCCTATTCTTAGTTTCCTTATTTTTGTAGT TTCACATTATCAGTGATTGTAAACCTTGTACATATATGATTAATTTCTCAGAGATTATTCTCAAGCAATTCAATAAACTA TTTGCACATCTCCTGATACCAAAGCTAACATTCTGGGCCTGAACAGATACCCTGACCCTAGACAGAACCCTAATTTTGTC AGATATGTTCTTAGTTGAGCCACCAAATCATGGCCAGTCTCATTCAGCATCTCTGATCGGTCACTCATGCAGCTGCGATC TTGTCGAAATTGCTACAGCCTCTATTCAAAGTGGAGAACTATGTCTAGATAGTATGGTGCCTCAAAATGAGTAGGACTTC ACTCTTCCAGAATTGAGAAAAATAAAGAATTGATAGAAAAATGATTTTTTTATCATCGAACCGCCTGAAGACATCTCCTC TCATGATGTTCACTATATTTGACTTCTGAGTTTCTTAGTCTTCTTCTTCATCAAATATTTTTTCATCACAGTTAGTCAAG GCTTCAGCAGATGGTTCCATGTCTTGCAAAGTTGGAATCTTCCTGTTATGTCCTGTCAACTTAGGAAGCATGCTGATACT TCCTTTTTTAAGTGAAGTTCAGACTAAGTCCTCTTTTGTTGTCATTTATTTTGATGTATGAGGTCCAAGTCATGTTTGTG CTCCGTCAGGTCTGGGGTATTTTGTCAATGGATGATTATTCTCAGTATACTTGGTTATTCTTATTGAAAGAACGCTATGA ATTATTTAGCATATTCAAATCTTTCTATACTGAAATTCAAAATCAATTAAGATTTTAATTAGTAACAATGCAGATGAGTA TTTCTGACATGACTTCTCTCATCATTTATGTCTTCTCATGAAGTCATTTATCATCAACATGCATATATCCCAACAAAATG GTTTAGCTGAAAGAAAAAGTCATCATCTTATTGAGACTACTCGTACTTTGCTGTTGCAAGTAAACATTTCCTTTGTTGTG AGTGCGGTGAGACAAGTTGATAGAACTGGACCATGATTAATCTACTGAATTTCTTCCCACAGCACCAAGATCGGAGCTCT GGTACCAGTTGATAGAACTAGACCAGAAAATAGACAAGAAACAGAGTAGAAAAGAGAGAAAATTATCTTATTATTACAAG AACAGAAGTTGTGAATACACTTCTGATCAGAAACTCTCCCTACAACTGAATGAGCAACTTCAGAATGACCCTACTAACTG CCCTCCATTCCTGTTATAGGAATGCTAATCAACTAACTTATGAAACAACCTAACTAACTTAGATAACAACCTAACTGACT GAAGTAACAGCCTAGCTAACTGGCTATTTATCTTGGCCCATTTAATTTTAAATATAAAAGATATTTTACTGTTTGACTTA AAAATATTTATCAATATCAGTGTCAAAAGTGTCTAGCCACCAAGAGGTTGTCAACTTGAAGTATCCAAGTTGAAGAGATT TTTTTTTTGCTCAAACACCGCAATCTCCAACACATGTCATACGAGTGCCGTCTGGGTGTCGGTGTCCGACATCGAGGAAC TTCTTATAACACAGGTTTCCCTGACAACTACATAGGCCCTGGCCCAATCTCACTTGGTTTTTGTATTTCTTGTATGATAT ACCTTATGAATAGGTGGTCTACTTCTATCAACTTATTTTGGTATAAGTTGGATAGATATATTATTTTATGCTTTGTTGAA AATATTGGGGCAAAAATTTTCATAATAGAGGCATCAGCACAAGAAAATAAGAAGGAAAACTAAAAGTAAGGACATGCAAG GAAAATAAATGGTTGCATATCCTCTTGAAGTTTCCATGAGGGCTTAGTATCTTTAGAATGAGAAGAAAGTTTTGTGGAAG AAGTTGGTGCAACCGGTTTGAGGTTTTGTTTTGCCAAATTTATGCATTCCAGTTATCTATGTGATCAAAGCCTTGTTTAT CTATAAAGCGATATGCCATCATGTCTGTTCCCAGCAGCTGACCTGCCCTCGTGTGTTGTTTTTTTGTCACTAGCTTCGTA GTTTTACTTTTAAGCCTTTCACTACCTTAGTTGGGATGGCTATACTCGGAAGACACTGATGTCAGCTTGAAGATAGTGAT TCATGTGCATACTAAGCGTTCTTCCATATAAATAATCTTGCTACTTTGATAAACATAAGTTTTATTATATTTTGTAGTCC AGAAAAATTATGATCTACCATCTTAGCATTGTGGTTTTATTAGTCTGATTTAAATCTTGATTTATCTTGTCAAGACTTGG GGGGCAAAAATGTACGAGCAAGGTCGTAAATGGTCTTTTCTCGTTCTATTTTTTTGATATTGTAAGGTGCATCTTGTTTT TGCAGGTTTGATACTGTGTACCTCGATGATGACCTTCGAGTTGTAAAGGATATCAGGGGAGACTATTTAGTTGTTGACAG AGCTTCCTACAGCTGGAAAGAGTGATTGGAACCTTCACTGTAATTGTGTTCATATTTTCATAATTAATAAAATATTTTAA CTTAACTGCCTGTATATTTTCAATTCTATCTCTGTACTTCTCTTTAATTTCTGTCAATGTATTGTACATCGCTTTATAAC ACTTCCGATGTGGGACTCCCATACCTGACAATTAATCCCTAGTCCTAACATATCATCTCTGGTTAAGCTAATTTATCATC TTTATTTTCTGTTGCAGTTGAAGTAGGACCAGTTACTCTACAATACTTTTGTTCAAATATCCTCATTTGTTACTTGCATT GTTGTCTGTTTACTGAATCTTCATATGCCAAAGAAGATTCTGTGTTACTTGCACTTTGCTCCATTATCTGTTCCTACAGA TGGCTGCCGACCTTGCAATCAATGTCCTTACTGTCCTGGTTAATTACTAGAGAAAGTCAAACCAGGGGCTCATTATCATA AACCATTCTAGATTTTAAACACACATGGTAAGAAATTTATATATGCTGTTTGTTTCCTTTGAGGAAAGAGAAAACAGATT ATAGTTTCTTCAGCTTTTTTGACAGAACTCCCAAAAGGGGAGGGATTACTAGTACTCATAAGAATAATGTAAAAGTTTTC TCAAGTCTCAACCAATATTGAATTTTAACATTGTCTATTTGAATCTTGTGATCTTGGTTCGTCTTGGTTGTTCTTTGAGG ATCTGCCAAATTTCAATTGAATGAACCATCATTGCATCTACATTTTCTAATTTTCTGCAGATTTTGTTTTTTTTTTTCTC CTTCTAAGCATGAGCACTATATATTAATGGTTACTGCTTTTATTCCTTTCTGATAACAAAGGAAACATATGCTTGTATTC TATGTTGGTGTTCTTTTATCTCTGTGCACTTGTATTGTACATATAGATTATTAAATAGTTAACATTTTCTTTGACCTGAT TTATAAATCATATTGTTTATTGTGAAATTCCAATTGGACTATTGGAGAATGCTACCCTTGGTTAGTTGACAAGTGCAAAA CCCCTCCCCCAAAAGCAAAGACTAAGTTGAAAGCAATTTTAATTTGTAGTCTAGAGAAAGTTTCATTATTTATTAAAAAA AAATCGAAATATAAAACTAAAACCACCCGAAAGCCCTAACGGTGCCTCTGTTCGTTGCAATAAATTACTTCTTAGCATAA GAAAAATAGTTCCATTAAAATCAGTAAATTACACCCAAAATTTCATGATTTTGTTTGTAATTCTAAAATTTAAAATAATC AGAAATAAAATAAGAAAGTTTGTTAGATAACAACGAACTT
CDS sequence (LotjaGi1g1v0600700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACCACCTCCACCCTCTTTCTCCTCCCCAAACCCTTCACCTCTCAAAACCCTAACAACAAATCTCGCTACCCTCA CCCGCGTTTCACCTGCTGCTCCGTCACAGCCCAATCCCTCCCCGCCAAGGACCACCTCCTCACCCTCATCTCCGACCAGG AACGCGGCATCAAGACCCAGACCGACCCGGCCAGGCGAGCCTCCATCGTGGAGGCGATCGACGCCTTGGCCGCTGTCGGC GCCGGCTCCGTCACCACCGGCGACTCGCTGTCAGCCACGTGGCGGCTGCTGTGGACCACCGAGAAGGAGCAGTTATTCAT TGTTGAGAAGGCTCACTGGTTCGGAACCCGTGCCGGTGATGTGTTGCAGGTCATAGATGTTCCGGGAAGAACCCTCAACA ACGTGATCACGTTTCCTCCGGATGGAGTTTTCTTCGTTCGGTCGAGTATTGAGATTGCGTCGTCGCAGAGAGTTAATTTC AGATTTACTAGTGCAGTGTTACGTGGGAAGAACTGGGGAATACCATTGCCACCATTTGGACAGGGTTGGTTTGATACTGT GTACCTCGATGATGACCTTCGAGTTGTAAAGGATATCAGGGGAGACTATTTAGTTGTTGACAGAGCTTCCTACAGCTGGA AAGAGTGA
Protein sequence (LotjaGi1g1v0600700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATTSTLFLLPKPFTSQNPNNKSRYPHPRFTCCSVTAQSLPAKDHLLTLISDQERGIKTQTDPARRASIVEAIDALAAVG AGSVTTGDSLSATWRLLWTTEKEQLFIVEKAHWFGTRAGDVLQVIDVPGRTLNNVITFPPDGVFFVRSSIEIASSQRVNF RFTSAVLRGKNWGIPLPPFGQGWFDTVYLDDDLRVVKDIRGDYLVVDRASYSWKE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 214 | 209 | 6.0E-112 | – | |
| PANTHER | 6 | 214 | 209 | 6.0E-112 | ||
| Pfam | 42 | 206 | 165 | 6.2E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0600700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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