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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0610100 |
| Transcript ID | LotjaGi1g1v0610100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|B9DNJ9|DNAJ_STACT Chaperone protein DnaJ; TrEMBL-Plants: tr|I3SWE4|I3SWE4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0610100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:115435414..115438433) extracted from Lotus japonicus Gifu genome v1.2.
GCCGTAATCACCACCGTGGACCGCCACTTCGGATCGGAGAATCTTTCTACTCATATTCTAAAATAACAAATCTTATTTTC AAATAGGACCATCTCCACATGTGAAACACAACAGTAGCATCACAGAAAAATATCTCGTGATTTTTCTATGCTGGACTCCA GAAATATCTACCTTCTCAAGAGTAAGACTAAAGCTTTGAGAATTCAGTACACAAACCATTGACGAACCATCAGAAGTATG TCGATTGTAGTCCCTGGTAGCTACTTCTTGTCTTGGTCAAAGACTTCTCAATTAGTTCATGGCCATATGAATTTCAACAG CCCCATGTCAAGGTATTATTAGATTACCCTGTACATGTTATAGAGGTTCAGAGCAAGTACTTGATTCTCCGTTCATTTTC CAAAAAAAAAAGGAACTACTTGGTTGGTAATATGAAAAATGACATATTAATTAATATGTGCAATTTTTGCTGGTTTCTAT TTGCCTCCCATGCTTGTTGAGTTGTTCACAAAAGTCATCTGTAAAGTATCTTGTGCTTTTAAACTGATAAACCTGTTTGA AGATGAAGGCAGAACGTCACTGTAGTAAGATGTTGTAATAGAAGATCATGGGAGAAACCAAGAGCTCAAAACAATTACTA TGAATTGCTTGGAGTTTCTGTTGATTCAGATACTCATCAAATTAAAGAAGCTTACCGGAAGCTGCAAAAGAAGTACCACC CAGATATTGTTGGCCAGAAGGTATTAAGTCACTTTTCTGTTTTTCAGAATTTTTTTTTGGATGCAAATCCAATAGCACTT AATTAGACCTTATCTAGTGTTTTTTCTAGTAGATTTGCTCCAATTAATCTATGAGGGTAAAATTTTGTTATTATAATTTG ACAATCTTTTGTCTATTATACTTCATGATGTGAAGATTGAACTTTATTTTTGTAGGGTCATGAGTATACTCTAATGCTAA ATAAGGCTTATGAAGTGCTGATGACAGAAGATCGAAGGAGAAAATATGATGAATCTATTGGTCAGATGAGGCTAAGATTT GGGGAAAACAACAGTGCTCCCCTAGGTTACAGCACATGGAATGGACCTTTAAGACCACAAGCTTTATTTGTTGATGAAAA TGCATGCATAGGTACTCTATACAGAAAATTTCCTCGTTGTCATCAAAGATTATAGTTCCATTTCAGAACTGAGAAAAGGA TGTTGACATTATAATCTATAATTGGAGTCTAATTAGCTGTAATATATTAATAATGAAAATCAGCTAGTATAGAATTTTTT TGATTTTATTACTCTACCCTTTCAATACTATTGCTGCCAGGATGCAGAGAATGTTTACATCATGCAAGCCATACTTTCAT CATGGATGAAGCTGTAGGATGTGCTCGGGTTAAAGTTCAATATGGAGACATCGACAAAAATATTGAGGTATATTGCCCAA GGTTAATGTTTTATTCACACTCTAAATCAAACTACACCAAGGGATAGATAGGAAGAAAATGGATATAAAAGAGAGATATG ATGTGTGATGTGATATGAGAAGTAGAAAGATAGGAAGAGAATAGGTGGAACTAAGATAGAAGAGTAAGTAGGGAGTGAAT GAAAATAACTCATTGCACTATTAGTGTATGATGAGATTTACACACATCAAGTTATATACTAATACTCTTATGAACCAACA ATTTCAAAAGGTTAAGTTGTTGGGTGATGTGAAACACAAATGGTTTTATATTATACCTCTAACACGGCAACTCACGCAGT AGCATTTGGACAATGCATAGGTCCACCTACATTGTGTTGAAACTCAACTTTCTATTAGAATAGTAGAGGCAACAAGGATC AACCTCTATATCATTTAATCATAGAGGTTCTGTTAGGAACCAACAAACCCAAAAGTTTAAGTTATGCTGGTGGATGAAGA CACATAAATGGTTTTGTATTATACCTATAACCTATACTTCTGTAAAGTACTATTTTAATGAGGCAAGAAAATCTCAGGTT TCTATGGAGTCATGCCCAGTCAACTGCATTCATTGGGTGGAGACAGAAGATTTGCCAACCCTAGAGTTCCTGATGCAGCC TCAGCCAAAGGAAGGGTATGGTATATTTGGAGGAGGTTGGGAAAGACCTTCAAATGTTTTCACTGCTGCAAAGTCTTTCA ACAAACAATTGAAGGGGCAAGCAACAACTAGGCCCTATGAAAGAACTGGTAGAAATTCTGAGACTTCATGATACACTGAT AAACTTGCTGCATGTTAATTTGATTTGGTTGCTGAGAAAAGTTATTTTTGCCCCATTGCTGTAGGAGGGATTGATCAAGA GAGCCCTGCTCAAGCTGAAGCTAGAGCTCATGCCAGCATGATGATAAAGATGGAGAATTTCTTGAAAATTCGGAACTGGG TGAGAGAAATCTTTGGCATAAAGCCATAAATATAAACCAGGGATGAAAGATGCAGATATCTATGAAAGAAAATTGGAATG TAAATATAATCAATTAACCTAGAAGAAGAGTTATGCTGTTCATATAGAATGTTTTATACAGATTCCAATGTATAATAACC AATTGAAATAAGGTTTAGTATAATTGCTTTGGATATGAAGATCTTACAACTGTTTAAGTTTCAAATACAAGTATCATGGG TGATTGGTTAGTGTGACTTGAGCTCTATCATTCTGACTTAGATTGTATATTATTTAGTTTTTAACCTGACAGAATGTTAA TAGCCAAAAAGGTCGTCAACAAACAGATCACTATGAAGTTCTGGAGCCCTGTAAAAGCTTAACCAAGGACTAAAGAGTTC ATGGTTTTCTGAATTTATTCAAAAATTGGCAACTAATGAAATGTTGATTTTGTGGCAGAACATATTACATTTACATAATC TGAAAGAAGAAAGACTTCCAAATTCACAATTGGCTTTCATCTCTTTGTGAAAATTAATTAGCTACAAAAAATTTCTAAAC ATAAGTAGTTAATAAGTTCTTATGCATTTTGAATCCCTTCTTTAAAGCCCATTGGGATGA
CDS sequence (LotjaGi1g1v0610100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGATTGTAGTCCCTGGTAGCTACTTCTTGTCTTGGTCAAAGACTTCTCAATTAGTTCATGGCCATATGAATTTCAA CAGCCCCATGTCAAGGCAGAACGTCACTGTAGTAAGATGTTGTAATAGAAGATCATGGGAGAAACCAAGAGCTCAAAACA ATTACTATGAATTGCTTGGAGTTTCTGTTGATTCAGATACTCATCAAATTAAAGAAGCTTACCGGAAGCTGCAAAAGAAG TACCACCCAGATATTGTTGGCCAGAAGGGTCATGAGTATACTCTAATGCTAAATAAGGCTTATGAAGTGCTGATGACAGA AGATCGAAGGAGAAAATATGATGAATCTATTGGTCAGATGAGGCTAAGATTTGGGGAAAACAACAGTGCTCCCCTAGGTT ACAGCACATGGAATGGACCTTTAAGACCACAAGCTTTATTTGTTGATGAAAATGCATGCATAGGATGCAGAGAATGTTTA CATCATGCAAGCCATACTTTCATCATGGATGAAGCTGTAGGATGTGCTCGGGTTAAAGTTCAATATGGAGACATCGACAA AAATATTGAGGTTTCTATGGAGTCATGCCCAGTCAACTGCATTCATTGGGTGGAGACAGAAGATTTGCCAACCCTAGAGT TCCTGATGCAGCCTCAGCCAAAGGAAGGGTATGGTATATTTGGAGGAGGTTGGGAAAGACCTTCAAATGTTTTCACTGCT GCAAAGTCTTTCAACAAACAATTGAAGGGGCAAGCAACAACTAGGCCCTATGAAAGAACTGGAGGGATTGATCAAGAGAG CCCTGCTCAAGCTGAAGCTAGAGCTCATGCCAGCATGATGATAAAGATGGAGAATTTCTTGAAAATTCGGAACTGGGTGA GAGAAATCTTTGGCATAAAGCCATAA
Protein sequence (LotjaGi1g1v0610100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIVVPGSYFLSWSKTSQLVHGHMNFNSPMSRQNVTVVRCCNRRSWEKPRAQNNYYELLGVSVDSDTHQIKEAYRKLQKK YHPDIVGQKGHEYTLMLNKAYEVLMTEDRRRKYDESIGQMRLRFGENNSAPLGYSTWNGPLRPQALFVDENACIGCRECL HHASHTFIMDEAVGCARVKVQYGDIDKNIEVSMESCPVNCIHWVETEDLPTLEFLMQPQPKEGYGIFGGGWERPSNVFTA AKSFNKQLKGQATTRPYERTGGIDQESPAQAEARAHASMMIKMENFLKIRNWVREIFGIKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 298 | 298 | 3.0E-138 | – | |
| PANTHER | 1 | 298 | 298 | 3.0E-138 | – | |
| Gene3D | 38 | 128 | 91 | 1.0E-19 | ||
| SUPERFAMILY | 53 | 126 | 74 | 8.11E-22 | ||
| SMART | 53 | 109 | 57 | 6.4E-17 | ||
| CDD | 54 | 104 | 51 | 1.66999E-15 | ||
| ProSiteProfiles | 54 | 117 | 64 | 16.904 | ||
| Pfam | 54 | 114 | 61 | 6.8E-17 | ||
| PRINTS | 56 | 74 | 19 | 7.6E-7 | ||
| PRINTS | 74 | 89 | 16 | 7.6E-7 | ||
| Gene3D | 144 | 206 | 63 | 1.1E-19 | – | |
| SUPERFAMILY | 146 | 205 | 60 | 2.16E-8 | – | |
| Pfam | 148 | 203 | 56 | 2.7E-8 | – | |
| MobiDBLite | 249 | 269 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0610100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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