Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0619200 |
| Transcript ID | LotjaGi1g1v0619200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat protein; TAIR: AT3G01750.1 Ankyrin repeat family protein; Swiss-Prot: sp|O15084|ANR28_HUMAN Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A; TrEMBL-Plants: tr|A0A151T8L9|A0A151T8L9_CAJCA Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A; Found in the gene: LotjaGi1g1v0619200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116611470..116615767) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGTTTGAAGCTATAAGCCATGTGCAGCCTGAGTGCATGCTGTCCTGGTATCCACATTTAATTTGAAGAAGTAAAAGC AGTGTGTTTCAGTTTAGCCTCCCCAATTACTTCCACTTCTTTTTGCACGTTAAACTAAAATCTCTCATTCTCTCTTACAT ATCATATCATTTCACTTCTACCATTACATCATTGCCACCAACAAACAACTTTATTTTCTCCACCCAACCTTCTTTCATTT TCATGTCCTTCCCATCCTATAATATGCTTTACTTTTTAAAATAAATATCGTCCATGAACACTTTATTGGCAAGTTAAATA GTCACGTTCAGATTCTGAGATGATAAAAAAATTCTGAAAATATCCTGCATTGTAGTTCATCGTGTTGTGCAATGTTCTTG TGAATAGTGATCACTTTTTGTTCTATTCATAGTTTTTCTCTGGAATGATCATAGGTCCTTCCTTTATCACAAAATCTAAC TAGATACTGTTAAATATGATCACTCCACTACTTTAATGAATTCTTGTTCTAAAGGGTATCTTGATCAGGTACTTCAAGCA GGTTATTATATTGTTAGTCTCTTCTGCTTCTTCAAGTGTTTTTATTAGTTATTTTCTACATTTCTCGCATGTGGGTATTT CAGTTCCCCTTTGATACTTTCTCATACTCGGTTGTATCATATTTTCCTTGTAAGGTTTCTTCTGTTGCATAGTTTTATCA TCCTCACTGTGATCCTGTGAGAAAGTATTGCTATACACTTCAGCCATTTCAAAATGTATCTCAAAATTGTTTCCAATTCA CCTTTGCTATCACTAATTTCAGTTTGAGATTCAGCACATTTAGTTTGAGGCATCAACTACTTTTGTTGAAGTTGTTACAT GTTAGTTAGCCTCTAAAATCTTCACAATAAGTTCTAAATTGCGGTCTGCGGTTGTGAAGTCCCCTCAACGGCACCGCGAA TGCAATTGCGGTCGTATCAATCTGCATTTGTCTGCAATTCCGCAAAACAACGACAACACAATGTCCATTAGATACTTCCC TCTTCGATGGGAGAGTACAGGGGATCAATGGTGGTATGCATCTCCCATAGACTGTGCTGCTGCTAATGGCCACTATGACC TGGTTCGTGAGCTGCTTCGAATTGACAACAACCACCTCTTCAAGCTCACGTCCCTGCGCCGCATCCGCCGCCTTGAACTT GTGTGGGATGAAGATGAGGAACAGTTCAGTGGTGTTGCAAAGCATCGTTCTGAGGTGGCCCAGAAGCTTCTCCTTGAGTG TGAATCCAAGAGGGGGGAGAACAAGAAGAAGAAGAACTCTCTCATGAGTGCAAGTTATGGTGGATGGCTAATGTACACTG CTGCATCAGCTGGTGATTTGGGTTTTGTTCAGCAGCTTCTTGAGAGGAACCCTCTTCTGGTGTTTGGGGAAGGAGAGTAC CATGTGACTGATATTTTCTATGCTGCTTCCAGGAGCAAGAACAGTGAGGTTTTCAGATTGCTCTTTGATTTTGCAGTTTC CCCAAGGTTTCTTAAAGGTGGGGTTTTGGAGCAACATGTTGGGGATGTTCCTTCAGTTTACAGGTGGGAGATGACCAACA GAGGTGTCCATGCTGCTGCTAGAGGAGGCAATGCAGAGATTTTGGAGAGGCTTCTTGCTAATTGCTCTGATGTTTTGGCT TATAGAGATGCTCAGGGATCTACTGTCTTGCATTCAGCTGCAGGCAGAGGGCAGGTTGAGGTCAGCACTAGTCCTTTTAT TTTCTTTTAAGTGCATGTTTGTATCAGCGTTGTCGGAATTGATTTTGGTAAACTTGATTATGGTAAAAGTAAGTTGAATT TGGAGAATCAATAGTGAGATTTCATAAAACATCACCCTATAGAAGCTATTCTCTCTATCTTCTCCTCAGAATTGATTTTG GGACAAAAATCAATTTTCTAAGTCGATTGCCAAAAATCTATATAACCACCTAAAAGTGCTTTTGGTCAATGAGAATTGAT TCTAAGGCTTTAAACGGGAACCAAACACACACTAGGTTTGATGTCTAGAACCACTCAATTGTTGGATGGTGCTACTCTAT CTATCTTGTACATGTTATTTTCTGTAAATTCCTTCTCATGGTTCCTTTTGCAGATGAGATGACTATTCTTGTGGTGTAGT AAAAGCCTCTTTAAAATTTTCAATGTGGTTTTCCATACCTAATGGTATAACATATAATGTTTCGTTAAGTATTGATTGAT CATAAGATGCTTTGGAAGCATGCTATAACATAAACCTCACATAAAATATTTGAACATGAAATATCCAAAGAGGACTAAGA CAGATCAGAGCTTCCCCAATTACTGTGAGTGATGTCCCATATTAGCTTAAAATGGGTTAAATAAAGATAACATACCCCAT ATTAGCTTTAAATGGGTTAAATTAAGGTTTTGGGTTAATAGATGGTGTGAAGTTGGTGATTTTATTTGGTCTCCCAGAGA TCTAGTACTTTTTCTAGTAGATAAGCTATTAGTCCGGATCCTAACAGGTCTTAGATTACCATCTAGTGTTCCCTTATTTT TTATTCATGACCTCATATCATTTGTCATTTGTCATGGTGGTTTGATATTATATCTAGTCTTCATGCCACCCTGCAGGTAA TCAAATATCTCACAACATCCTTCGACATGATCAACTGCACAGACCATCAGGGAAACACTGCTTTGCATGTTGCTGCATAC AAAGGCCAGTTAGCTGCAGTTGAAACTTTAGTTTCTTCATCTCCTGCATTAATCTCTTTCCGAAACAATGCCGGAGAAAC TTTTCTCCACAAGGCTGTGTCTGGCTTTCAATCTCCAGCATTCCAAAGATTGGACCGACGCATCGAGCTTCTGAGGCAGT TACTAACTGACAAAAAATTCCACATAGAGGAAATCATCAATGGAAAGAACAGTGATGGAAGAACTGCACTTCACATTGCC TCAATGGGAAACATTCACACTGATCTTGTAAAACTCCTGATGACTGATCCGTCGATATATGTGAATGTGAGTGATGCTGA TGGAATGACCCCTCTTGATTATCTTAGGCAAAGTCCCAACTCTGCAATATCAGGTGTATTAATTAGGAAATTTATCTCAG CTGGGGGAATGTTCTGTTATCAAGGTTATAATAACTCAAGAAAATCCATAGCTTCTTCACACATGAAAGTGCATGATATT GAAAGTAGTCCTGGAACATCATTTAGAATTTCAGACACTCAAATGTTCTTGTACACAGGCATTGAGAATTCATTTGAATC AGATTGTAGTAATGATCAAGGAATTGCAGGATTGAGTTCAAGTTCAAGTTCATCAGAGCACACTTCATTAGAGAATAGAT TGTCAACCACTAGCAAAATTAGGCCAAGTGCTATATACAATGTGGCTGTAGGTTTGAAAAGAGTCATTCAATGGCGTCGC GTGAAGGACGAGAAATCTGAGGAGAGATTCAAGAAAGCAATGGATGACTCTTCAGTGGACTCATTCAGAAAATTAAACTT CTCAGATGAAACTCCAACATCACTTCGACAAAGATTTTTCAGGCACTCAGCACTTCCTAGCAATAAAAGGAGTCTCTGTG TGAGGAGTTACCAGTCAAGTCCAAATGCTAAGAAGAAATTTGCTTCGGGACCGGTTCACGGAAGAACTAGCTCTAGCTCC TTCTCAATATCATCATTTTCTTCACCTAGATCAATTGATAAGCAAAAGGGTATTTGCATTGACAATGATGGTGTAGCTGG ACCATCTTGCTTGAGTCATTTACATGGTGATCAGGAATCACCAAATCTGGGAAAGCGAATTTCGGTTAGTAAAAAGCTAA GGGGACACTACTTTTGCTTTTGTGAACCTCACCTTGATGTTAAAACCTCATTAACACAGTCAACAAGAGAGGCAGAGTTA CAAGAATCCTGTTGATTCAGTTGCTTAATTGGATGAAACTTGCTATTTCCTGAACAGGCTAATGGTAAAACAGCACTTTA TCAAGGTGTGAGTGTATCTAGTGTGTTCATTAGTTGTAGGTTTATATGGATAAGGGTAATGCTATATGTTACGAAGGAAA GTAGTGTAAAAAATGATGATGTGAGTGATACCTACCTCTTCTTGCATTTCTTATCGTAACTTTTAGTATTTTCCTATGGA TAATATGTGAGTGTTAACAAGTGTTTGTCCTTAGCTCCTTGTTAATAGAAGACTCTGATGTTGAACTGTTCTTACTTCTT AGCAAGTTGGAGTAGTATTGTGCTAGCTATGAATTTAACCTGTAGCAACCAATTTTCA
CDS sequence (LotjaGi1g1v0619200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCATTAGATACTTCCCTCTTCGATGGGAGAGTACAGGGGATCAATGGTGGTATGCATCTCCCATAGACTGTGCTGC TGCTAATGGCCACTATGACCTGGTTCGTGAGCTGCTTCGAATTGACAACAACCACCTCTTCAAGCTCACGTCCCTGCGCC GCATCCGCCGCCTTGAACTTGTGTGGGATGAAGATGAGGAACAGTTCAGTGGTGTTGCAAAGCATCGTTCTGAGGTGGCC CAGAAGCTTCTCCTTGAGTGTGAATCCAAGAGGGGGGAGAACAAGAAGAAGAAGAACTCTCTCATGAGTGCAAGTTATGG TGGATGGCTAATGTACACTGCTGCATCAGCTGGTGATTTGGGTTTTGTTCAGCAGCTTCTTGAGAGGAACCCTCTTCTGG TGTTTGGGGAAGGAGAGTACCATGTGACTGATATTTTCTATGCTGCTTCCAGGAGCAAGAACAGTGAGGTTTTCAGATTG CTCTTTGATTTTGCAGTTTCCCCAAGGTTTCTTAAAGGTGGGGTTTTGGAGCAACATGTTGGGGATGTTCCTTCAGTTTA CAGGTGGGAGATGACCAACAGAGGTGTCCATGCTGCTGCTAGAGGAGGCAATGCAGAGATTTTGGAGAGGCTTCTTGCTA ATTGCTCTGATGTTTTGGCTTATAGAGATGCTCAGGGATCTACTGTCTTGCATTCAGCTGCAGGCAGAGGGCAGGTTGAG GTAATCAAATATCTCACAACATCCTTCGACATGATCAACTGCACAGACCATCAGGGAAACACTGCTTTGCATGTTGCTGC ATACAAAGGCCAGTTAGCTGCAGTTGAAACTTTAGTTTCTTCATCTCCTGCATTAATCTCTTTCCGAAACAATGCCGGAG AAACTTTTCTCCACAAGGCTGTGTCTGGCTTTCAATCTCCAGCATTCCAAAGATTGGACCGACGCATCGAGCTTCTGAGG CAGTTACTAACTGACAAAAAATTCCACATAGAGGAAATCATCAATGGAAAGAACAGTGATGGAAGAACTGCACTTCACAT TGCCTCAATGGGAAACATTCACACTGATCTTGTAAAACTCCTGATGACTGATCCGTCGATATATGTGAATGTGAGTGATG CTGATGGAATGACCCCTCTTGATTATCTTAGGCAAAGTCCCAACTCTGCAATATCAGGTGTATTAATTAGGAAATTTATC TCAGCTGGGGGAATGTTCTGTTATCAAGGTTATAATAACTCAAGAAAATCCATAGCTTCTTCACACATGAAAGTGCATGA TATTGAAAGTAGTCCTGGAACATCATTTAGAATTTCAGACACTCAAATGTTCTTGTACACAGGCATTGAGAATTCATTTG AATCAGATTGTAGTAATGATCAAGGAATTGCAGGATTGAGTTCAAGTTCAAGTTCATCAGAGCACACTTCATTAGAGAAT AGATTGTCAACCACTAGCAAAATTAGGCCAAGTGCTATATACAATGTGGCTGTAGGTTTGAAAAGAGTCATTCAATGGCG TCGCGTGAAGGACGAGAAATCTGAGGAGAGATTCAAGAAAGCAATGGATGACTCTTCAGTGGACTCATTCAGAAAATTAA ACTTCTCAGATGAAACTCCAACATCACTTCGACAAAGATTTTTCAGGCACTCAGCACTTCCTAGCAATAAAAGGAGTCTC TGTGTGAGGAGTTACCAGTCAAGTCCAAATGCTAAGAAGAAATTTGCTTCGGGACCGGTTCACGGAAGAACTAGCTCTAG CTCCTTCTCAATATCATCATTTTCTTCACCTAGATCAATTGATAAGCAAAAGGGTATTTGCATTGACAATGATGGTGTAG CTGGACCATCTTGCTTGAGTCATTTACATGGTGATCAGGAATCACCAAATCTGGGAAAGCGAATTTCGGTTAGTAAAAAG CTAAGGGGACACTACTTTTGCTTTTGTGAACCTCACCTTGATGTTAAAACCTCATTAACACAGTCAACAAGAGAGGCAGA GTTACAAGAATCCTGTTGA
Protein sequence (LotjaGi1g1v0619200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIRYFPLRWESTGDQWWYASPIDCAAANGHYDLVRELLRIDNNHLFKLTSLRRIRRLELVWDEDEEQFSGVAKHRSEVA QKLLLECESKRGENKKKKNSLMSASYGGWLMYTAASAGDLGFVQQLLERNPLLVFGEGEYHVTDIFYAASRSKNSEVFRL LFDFAVSPRFLKGGVLEQHVGDVPSVYRWEMTNRGVHAAARGGNAEILERLLANCSDVLAYRDAQGSTVLHSAAGRGQVE VIKYLTTSFDMINCTDHQGNTALHVAAYKGQLAAVETLVSSSPALISFRNNAGETFLHKAVSGFQSPAFQRLDRRIELLR QLLTDKKFHIEEIINGKNSDGRTALHIASMGNIHTDLVKLLMTDPSIYVNVSDADGMTPLDYLRQSPNSAISGVLIRKFI SAGGMFCYQGYNNSRKSIASSHMKVHDIESSPGTSFRISDTQMFLYTGIENSFESDCSNDQGIAGLSSSSSSSEHTSLEN RLSTTSKIRPSAIYNVAVGLKRVIQWRRVKDEKSEERFKKAMDDSSVDSFRKLNFSDETPTSLRQRFFRHSALPSNKRSL CVRSYQSSPNAKKKFASGPVHGRTSSSSFSISSFSSPRSIDKQKGICIDNDGVAGPSCLSHLHGDQESPNLGKRISVSKK LRGHYFCFCEPHLDVKTSLTQSTREAELQESC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 665 | 662 | 2.2E-198 | – | |
| PANTHER | 4 | 665 | 662 | 2.2E-198 | – | |
| Gene3D | 14 | 173 | 160 | 1.0E-7 | ||
| SMART | 18 | 47 | 30 | 41.0 | ||
| SUPERFAMILY | 22 | 397 | 376 | 2.05E-36 | ||
| SMART | 106 | 135 | 30 | 2200.0 | ||
| SMART | 140 | 170 | 31 | 870.0 | ||
| Gene3D | 187 | 314 | 128 | 1.3E-23 | ||
| SMART | 191 | 220 | 30 | 410.0 | ||
| ProSiteProfiles | 196 | 398 | 203 | 26.39 | ||
| SMART | 225 | 254 | 30 | 0.17 | ||
| ProSiteProfiles | 225 | 257 | 33 | 9.137 | ||
| Pfam | 227 | 279 | 53 | 4.0E-9 | – | |
| SMART | 258 | 288 | 31 | 0.16 | ||
| ProSiteProfiles | 258 | 280 | 23 | 9.19 | ||
| SMART | 292 | 332 | 41 | 1500.0 | ||
| Pfam | 295 | 361 | 67 | 1.0E-4 | – | |
| Gene3D | 315 | 400 | 86 | 2.1E-10 | ||
| SMART | 340 | 371 | 32 | 0.71 | ||
| MobiDBLite | 464 | 483 | 20 | - | – | |
| MobiDBLite | 570 | 599 | 30 | - | – | |
| MobiDBLite | 580 | 599 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0619200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…