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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0621100 |
| Transcript ID | LotjaGi1g1v0621100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat; TAIR: AT5G14230.1 ankyrin; Swiss-Prot: sp|O70511|ANK3_RAT Ankyrin-3; TrEMBL-Plants: tr|A0A151RJD0|A0A151RJD0_CAJCA Putative ankyrin repeat protein RF-0381; Found in the gene: LotjaGi1g1v0621100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116855032..116860967) extracted from Lotus japonicus Gifu genome v1.2.
ATCAAATTAAAAAAAAAATAGATTTCCAAAAATACACTAAACTAAACTTAGTTGCCGGATTCCCAAAATCCAAAACCATG TTACACACTATTCACTCCCTCTTAGTATTTTCAAGTGTGACCGGCTGGACGGCTTGGACCCAGTAATTAAAACCATCCTA ATATAAATACACTCCCAGGCGCTCACTTCTTTCAACTTTCCTTCTCTCGATTCTCGCGTCCACAGACAGCACTCTCCGCC CGTCCGCCGCCGCACAATGACGGTGTTTTCAGCCAAACAAGTCTTCCCGGTGGACTACGAAGTCGAGGTCTCACGCCGCC TCCTCGAAGCTTCTCACTCCGGCGACCTAGCCCTTGCCTCCCCCTGCATTTCCGATCCCTTCGTCGACGTCAACTTCACC GGCGCCATCACGTTGAAAACCAGAAGCACTGACCTCGTTCTCCACCATGAATCCGCTAGCCAGGTCCGCGTTGAGTTCCA GGAGTTCGTCACCGATGTTACGCCACTGTTCCTCGCCGTACACGCCGGAAATGCTGGCCTTGTCCGGAAGCTACTGGTAA TGTCTTCGCTGCTGTTCAGATCGCGATTTGAGCTTCGTTTTTCATTTGTTAACTGTTTTATTGATTTTTGTTTCTCTGAT TTGAGGTTGAGTTTACCGTTAATCTGATTTCGAAACGTTTTGTGTGCGTTTTGTTTAGCCTGTTGAATTTTTCAAATTTA CTCAACACTGATTTCGAACTGTTTTGTTGTTTACTCAACTAAACTTGAGTGGACTTTTTATTCATTTTTGGTCCTTGGAA AAATCTTAAATTACTAAAAGTGGTTTTAGTTTTTGAATTTTCCACAACAATTTCGAATTTAAATTAAAGTGTTTCTCTTT CTCGCACTTTTTAATTTATTTATTTATTAAATTACCATGACTGGTCCCATTTCACTTTTCTCTCCCATTAGGCCATTACC ATTGTAATATTTTCCTTCTCATCATGAAAATTTGATTTAAAAATATTTTAAAATTTCATCAAAATTTTAAGAAGATTGCA AAAAAGAATTGATAATTGATTGTGGAGAGTTGTAAGATAGATGCAGATTTATTTACATGATGACAATTTTTCTTGATTTC TTCTCCTCTTTGATGTTATTATTATTTTTTTACTTGTTTTTGTTTTTAGTAGCAAGCATGTCTTGTGTGCCACATGCTCT ATTGTCCCCGACAATTAGACATACTACAATTGATTCATCATGCATCCTCCCTTCATATGACCCACCCACCGACTAAGAAT AAAAACAAACGAAATATCTGTTTTTATTTTCTTACCTTCCCTCATTTTTTTTGTTTGATTTGCTTTGTTCAGTTTCATTT TTTGTTCAACTTGTGGTGAGTCATGTCAGATCATATTTAGTTTCTCATTTAGTTTCTGTATCTTTGTGGATTTGGAAAGT ATTGTTGGAAATCCCCATTGGGGTAGCCATTAAAAGGTAATATGAATATATGGCATGATTTGATATGAAGAGAGATAGAA AAGTTGGATGAACTTATGTTGGTAGATGTCTGAGAATCAGTGTTATCAAATATCCGCCATGTAGGGTTGGCAATGGGCTC CGTGGGTGTGGGTTTGGTCATTCCCACACCCAAACTCAAACTTAACACCCAAACCCAAACCCAAATTTAATATGGGTGCA AAAGTTAAATCCAAACCCAAATCCCTGGGTTTCGGGTTACCCGAACTCAAACCCAAAACCCAATGTGAACACCGAACCGA CAAAAAATAAAAAATATCAATCCGAAAACAACATGTACATAAGAGAACAACATGAACATAAGCTGATTAAACCTCATTAT CATTCCAATACAAAGGAAAAAATATAGTTCATGAACATAAGCCTACTTAGTAACTTTAAAAAAAACTCTATTTAGTAGCT TTAATAGTATATATATAAGGGTTGGTAATTACATGCATAAGACTTCGGGGTTGAGTTTGGGTTTGGGTGCGAGTTTAATC AATCCCACACCCAAACCCAAACATGTTTTAAAATTTGGGTGAAACCCAAACCCGAACCCAACCCCAAAGAAATCGGGTTT CACCCACAATTTCGGGTCGGGTTCGACCCCGCAGGTTTGGGTTTTCCTGCCATCTCTACCGCCATGGCGGTTTTTTTGGT TTTCCATCATGACCATTATCTTGCCATATGGCCGCCATATTCCATCATATTCCGCAATTATTTGCCATGTATGGCGGGAT TTTGGTTTCCCGCCATCCGCAATTAATTACACTGCCAAGAATGTGATTGTTGTGGATTTAGAATCTTTTTGCACAAGTTC TAAGTTCTAGCAGCATACTTGGAAACAGTAAAGAAAAAACAATGAAGGAAGGAAAATTAGTTGAATTGTGGAAGGCACTT TGTTCTAAAATGTATCAGAAGTTCTTGTAGGATTTTATTGGGGATATAAACTTTAGGTCACTACTTACTAAAAGGTTGAT TCTTCTTAAAATGACAGGTTGTGGGAGCTGATGTAAACCAAAAGCTCTTCAGAGGCTTTGCAACCACCGCAGCAGTGAGG GAAGGGCACCTTGATATTCTTGAGACGTTACTCAAAGCAGGGGCATCGCAGCCAGCTTGTGAAGAAGCACTTCTAGAGGC ATGCTGCCATGGGCAAGCGGGGTGTGCAGAATTGCTCATGAACTCTGATTTGATCCGACCTCATATTGCTGTACATGCTC TTGTCACCGCGTGCTGCAGGGGGCTTGTAGATGTGGTTCAGACTCTCATAAAGGTACATGTTCTGCAGCTGCTTGATTCT GTAGATTCCAATTCATGATGGCATTGGCATCCCTGAACATAAACTTCCATGATCAGTATAATTTACAATTATCTGGTCGG TATTATATGGCGCATTATGAAGTTGCGTCCTGTGGACTTAAAACTTTTATTCCTAGTGTAACCTTCTTTTGAACACAAAG GTCATTATTGACTTCACCATGGACTTCTTTGTGAAGTTTGGTTCTTGGTAATTGGTACATTATTTGGATGGTATTTGCTG AAATAATAAAAAATAAAAAATAGATTTTAAATAATGGCCGCAGTCGTGTATCGTGATCTTTGATATTGTGGAAAATCACA GATAAATGCGGTTGATATGGCTATATGCCGTCACGGGGCGTCCAAAACCATAATGTCCCGGCCGCAATTGCATTCTGATC ATAAAGTTTTTATAAGCCTTTGTGATGCTTGTTAGCTAAACTTCCTCAAACACTTCACTCGCTTTTCTCTTGTTACAAGA AGAAACCTTTACCACGGACTGTCATCTTTCTAGAGTTCAACTGACTGGTCCTCATGTAATATTCTGAGACTAGTATTTGG CTTACACTCTCTAGGGAGTCAATGAACTATGCTTGTACTCAGCTTTCTACTGTATTTGTGGTTTATGGAAAATACTTGTT TGAGTATGCTGAACTTGAGATGATATTTTCAATGGCAGTGCGGTGTGGAGGTAAATGCGACAGACCGGGTACTTTTACAG TCACTTAAGCCTTCTCTCTACACAAATGTGGACTGTAATGCACTTGTTGCAGCTGTAATTCATAGGCAGGTCCCTGTTGT CGATTTGCTGCTGCAGGTAATCTTTTCCCTTAGCCCCTTCAAACCTTTGATTATCATTACAATTTGGTTTACTGCATGAG AATATTTTACATTGCTGCACATTCCTAGGTTTTGCAGCCAATATTTCCTTACTTTTTGGATTTGCTTTTGTGATCGATTG GTTTGCTGCTTTTTACAGTATATATTTTCATTTTTTCCAAAATAATTTCTTCATGGTATAATGAGTTATTTAAGAAGTCA TAAGTTTGTGGCAGAAAAGGCCTCATCTTGTAATGCTGGTAATAATGTTCATCAGCTCAGCAATTTCTTGCAGTTGCACA ACAATATAAAAAAATATGATCTTCATGGTTAAATTTTAGCATTTAATCAGCTAATTCTGCCGATAGGGACATAATTGCAT TTATCTTTCCATTGTCATTTTAATTTTTAGTGTGAAATGAGCCTCACTAGAACTTTCTTACAAATGAACTACAGAATGGT GCTCAGCTAGACTTCGAAGTCAGACTTGGAACATGGTTATGGGACACTTCAAATGGTGAAGAGCTTCGTGTTGGTGCTGG ACTAGGAGAACCTTATGGCATCACCTGGTGCGCAGTTGAATATTTTGAAAGAAGTGGCGCTATATTACGCATGCTTCTGC AACATGTCTCCGTCAATAATTCTAACCGTGGGAGAACCCTTCTACACCATGCTATCCTCTGTGGCAATGTTGAGGCTGTC AGGATACTCTTAGAATGTGGTGCTAATGAAGAATCCCCAGTCAGAACAGTCAGCAAGACCGAGTTCCTTCCAATTCACAT GGCGTCTCATATTGGCTTACCAACAATTGTTCAATGCCTTATTGATTTTGGTTGTAATTTGAACTCCATAACGGACTCCG GTGACACAGCTTTAATGGTTTGTGCAAAATATAAACAAGAGGAGTGTCTCAAAGTACTAACCAGGGCTGGTGCTGATTTC GGGTTGGTTAATTTGGCTGGTAAATCTGCGAGTTCAATTGCTGAGTCAAACAAGTGGTCACTTGGTTTTCAGCAAGCGGT GCTGGACACAATCAGGAAAGGCAATATACCCAAATCCAGCAATGCTTCTACCTTTTCTCCTCTATTGTTTGTAGCTCAAG CTGGAGATACCGAGGCATTGTCAACTGTCATTGAATCTGGAAAATTTGATCTTGATCACCAAGATGATAGTGGTTTCTCA GCAGTAATGCATACTGCTTTGAAGGGTCACGTGGAGTCATTTAGATTGCTTGTATTTGCTGGAGCCGATGTAAAGCTGTG CAATAAATCTGGTGAAACAGCAATAACCCTATCTGAATTAAATCAGAACCGTGACTTATTCGAAAAGGTCATGCTTGAAT TCGCGCTTGAAAAGGGCAACCGTAACACTGGTGGCTTCTATGCCTTACATTGTGCAGCTCGTCGTGGTGACTTGGAAGCT GTGACATTGCTCACCAGCAAAGGCTATGATGTGAATGTCCCTGATGGGGAGGACTACACTCCGCTCATGCTAGCAGCAAG GGAAGGCCATGGATCCATTTGTGAGCTTCTAATCTCACATGGGGCTCATTGCAATGCTAAAAATGCTCGAGGGGAAACTG CACTTTCACTTGCAAGGAAGTTCCGAGGAGGGAAAAACGATGCAGAGGCTGTTATACTTGATGAACTTGCTCGTAAGTTG GTATTGGGTGGTGCCTGTGTTCAGAAGCATACCAGAGGTGGTAAAGGCTCGCCACATGGGAAACAATTAAGGATGTTGGG CTCTGCAGGTGTGCTGCGTTGGGGAAAGTCAAGGCGGAGAAATGTGATATGCTGTGAGGCAGAGTTAGGGCCAAGCTCAG CATTGGGGAGAAATAGGCGCAAGAAAGGTGATGCAGATGAACCTGGAGTTTTTAGGGTGCTTACTAACAAGAACAGAGAA GTGCATTTTGTTTGTGAAGGGGGGCTAGAAGTTGCTGAGCTTTGGGTGAGGGGTATTAAGCTTGTAACTAGAGAGGCTAT TTTTCATTTGTAGAGATCGATCTAAGTGCTTATTTGAAAATTCTTTTATAATTGATTTTAAAGTCAAGATCAATTATCAG AAGAAGCTTATGTGAGTAGCTTCTTAGTGCTAGAATTGATCATGGGGAATGAGAGTCGATCGAAACATGCTAGAAGTAGC TTTAGTGTCAATATGGTAGGATATATAGTTGCTTGGGGTAATACTTCTTCTTGAAGTATTTTAGCTGCTTTTCTATTGTA AAGATTTTGATCTCTCTATAATATTTGTACATCCTTTTTGGGAGGTTGGGAAAGTTGAAAACAGGAAAGCTCTGTTGCGT TTCTTGTACCCGTTGG
CDS sequence (LotjaGi1g1v0621100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGGTGTTTTCAGCCAAACAAGTCTTCCCGGTGGACTACGAAGTCGAGGTCTCACGCCGCCTCCTCGAAGCTTCTCA CTCCGGCGACCTAGCCCTTGCCTCCCCCTGCATTTCCGATCCCTTCGTCGACGTCAACTTCACCGGCGCCATCACGTTGA AAACCAGAAGCACTGACCTCGTTCTCCACCATGAATCCGCTAGCCAGGTCCGCGTTGAGTTCCAGGAGTTCGTCACCGAT GTTACGCCACTGTTCCTCGCCGTACACGCCGGAAATGCTGGCCTTGTCCGGAAGCTACTGGTTGTGGGAGCTGATGTAAA CCAAAAGCTCTTCAGAGGCTTTGCAACCACCGCAGCAGTGAGGGAAGGGCACCTTGATATTCTTGAGACGTTACTCAAAG CAGGGGCATCGCAGCCAGCTTGTGAAGAAGCACTTCTAGAGGCATGCTGCCATGGGCAAGCGGGGTGTGCAGAATTGCTC ATGAACTCTGATTTGATCCGACCTCATATTGCTGTACATGCTCTTGTCACCGCGTGCTGCAGGGGGCTTGTAGATGTGGT TCAGACTCTCATAAAGTGCGGTGTGGAGGTAAATGCGACAGACCGGGTACTTTTACAGTCACTTAAGCCTTCTCTCTACA CAAATGTGGACTGTAATGCACTTGTTGCAGCTGTAATTCATAGGCAGGTCCCTGTTGTCGATTTGCTGCTGCAGAATGGT GCTCAGCTAGACTTCGAAGTCAGACTTGGAACATGGTTATGGGACACTTCAAATGGTGAAGAGCTTCGTGTTGGTGCTGG ACTAGGAGAACCTTATGGCATCACCTGGTGCGCAGTTGAATATTTTGAAAGAAGTGGCGCTATATTACGCATGCTTCTGC AACATGTCTCCGTCAATAATTCTAACCGTGGGAGAACCCTTCTACACCATGCTATCCTCTGTGGCAATGTTGAGGCTGTC AGGATACTCTTAGAATGTGGTGCTAATGAAGAATCCCCAGTCAGAACAGTCAGCAAGACCGAGTTCCTTCCAATTCACAT GGCGTCTCATATTGGCTTACCAACAATTGTTCAATGCCTTATTGATTTTGGTTGTAATTTGAACTCCATAACGGACTCCG GTGACACAGCTTTAATGGTTTGTGCAAAATATAAACAAGAGGAGTGTCTCAAAGTACTAACCAGGGCTGGTGCTGATTTC GGGTTGGTTAATTTGGCTGGTAAATCTGCGAGTTCAATTGCTGAGTCAAACAAGTGGTCACTTGGTTTTCAGCAAGCGGT GCTGGACACAATCAGGAAAGGCAATATACCCAAATCCAGCAATGCTTCTACCTTTTCTCCTCTATTGTTTGTAGCTCAAG CTGGAGATACCGAGGCATTGTCAACTGTCATTGAATCTGGAAAATTTGATCTTGATCACCAAGATGATAGTGGTTTCTCA GCAGTAATGCATACTGCTTTGAAGGGTCACGTGGAGTCATTTAGATTGCTTGTATTTGCTGGAGCCGATGTAAAGCTGTG CAATAAATCTGGTGAAACAGCAATAACCCTATCTGAATTAAATCAGAACCGTGACTTATTCGAAAAGGTCATGCTTGAAT TCGCGCTTGAAAAGGGCAACCGTAACACTGGTGGCTTCTATGCCTTACATTGTGCAGCTCGTCGTGGTGACTTGGAAGCT GTGACATTGCTCACCAGCAAAGGCTATGATGTGAATGTCCCTGATGGGGAGGACTACACTCCGCTCATGCTAGCAGCAAG GGAAGGCCATGGATCCATTTGTGAGCTTCTAATCTCACATGGGGCTCATTGCAATGCTAAAAATGCTCGAGGGGAAACTG CACTTTCACTTGCAAGGAAGTTCCGAGGAGGGAAAAACGATGCAGAGGCTGTTATACTTGATGAACTTGCTCGTAAGTTG GTATTGGGTGGTGCCTGTGTTCAGAAGCATACCAGAGGTGGTAAAGGCTCGCCACATGGGAAACAATTAAGGATGTTGGG CTCTGCAGGTGTGCTGCGTTGGGGAAAGTCAAGGCGGAGAAATGTGATATGCTGTGAGGCAGAGTTAGGGCCAAGCTCAG CATTGGGGAGAAATAGGCGCAAGAAAGGTGATGCAGATGAACCTGGAGTTTTTAGGGTGCTTACTAACAAGAACAGAGAA GTGCATTTTGTTTGTGAAGGGGGGCTAGAAGTTGCTGAGCTTTGGGTGAGGGGTATTAAGCTTGTAACTAGAGAGGCTAT TTTTCATTTGTAG
Protein sequence (LotjaGi1g1v0621100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVFSAKQVFPVDYEVEVSRRLLEASHSGDLALASPCISDPFVDVNFTGAITLKTRSTDLVLHHESASQVRVEFQEFVTD VTPLFLAVHAGNAGLVRKLLVVGADVNQKLFRGFATTAAVREGHLDILETLLKAGASQPACEEALLEACCHGQAGCAELL MNSDLIRPHIAVHALVTACCRGLVDVVQTLIKCGVEVNATDRVLLQSLKPSLYTNVDCNALVAAVIHRQVPVVDLLLQNG AQLDFEVRLGTWLWDTSNGEELRVGAGLGEPYGITWCAVEYFERSGAILRMLLQHVSVNNSNRGRTLLHHAILCGNVEAV RILLECGANEESPVRTVSKTEFLPIHMASHIGLPTIVQCLIDFGCNLNSITDSGDTALMVCAKYKQEECLKVLTRAGADF GLVNLAGKSASSIAESNKWSLGFQQAVLDTIRKGNIPKSSNASTFSPLLFVAQAGDTEALSTVIESGKFDLDHQDDSGFS AVMHTALKGHVESFRLLVFAGADVKLCNKSGETAITLSELNQNRDLFEKVMLEFALEKGNRNTGGFYALHCAARRGDLEA VTLLTSKGYDVNVPDGEDYTPLMLAAREGHGSICELLISHGAHCNAKNARGETALSLARKFRGGKNDAEAVILDELARKL VLGGACVQKHTRGGKGSPHGKQLRMLGSAGVLRWGKSRRRNVICCEAELGPSSALGRNRRKKGDADEPGVFRVLTNKNRE VHFVCEGGLEVAELWVRGIKLVTREAIFHL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 748 | 744 | 0.0 | – | |
| PANTHER | 5 | 748 | 744 | 0.0 | – | |
| Gene3D | 11 | 141 | 131 | 9.7E-10 | ||
| ProSiteProfiles | 79 | 618 | 540 | 61.279 | ||
| ProSiteProfiles | 79 | 111 | 33 | 9.644 | ||
| SMART | 79 | 108 | 30 | 0.4 | ||
| SUPERFAMILY | 81 | 417 | 337 | 1.93E-35 | ||
| Pfam | 84 | 163 | 80 | 2.2E-7 | ||
| SMART | 110 | 140 | 31 | 1400.0 | ||
| Gene3D | 142 | 256 | 115 | 4.8E-11 | ||
| SMART | 170 | 199 | 30 | 52.0 | ||
| SMART | 216 | 245 | 30 | 29.0 | ||
| Pfam | 279 | 329 | 51 | 9.4E-7 | ||
| Gene3D | 287 | 375 | 89 | 1.7E-14 | ||
| SUPERFAMILY | 300 | 619 | 320 | 1.13E-51 | ||
| ProSiteProfiles | 303 | 329 | 27 | 10.846 | ||
| SMART | 303 | 332 | 30 | 0.0024 | ||
| SMART | 340 | 369 | 30 | 5.1 | ||
| SMART | 373 | 402 | 30 | 0.015 | ||
| ProSiteProfiles | 373 | 405 | 33 | 8.603 | ||
| Gene3D | 376 | 419 | 44 | 1.4E-9 | – | |
| Gene3D | 420 | 530 | 111 | 5.6E-15 | ||
| SMART | 443 | 473 | 31 | 1300.0 | ||
| SMART | 477 | 506 | 30 | 3.1 | ||
| ProSiteProfiles | 477 | 509 | 33 | 8.923 | ||
| Gene3D | 531 | 632 | 102 | 2.2E-25 | ||
| Pfam | 534 | 608 | 75 | 9.6E-12 | ||
| ProSiteProfiles | 544 | 576 | 33 | 11.327 | ||
| SMART | 544 | 573 | 30 | 0.0039 | ||
| SMART | 577 | 606 | 30 | 3.9E-4 | ||
| ProSiteProfiles | 577 | 609 | 33 | 11.861 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0621100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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