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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0630300 |
| Transcript ID | LotjaGi1g1v0630300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endosomal targeting BRO1-like domain protein; TAIR: AT5G14020.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A1J7HW35|A0A1J7HW35_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0630300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:118340642..118343703) extracted from Lotus japonicus Gifu genome v1.2.
AAGAATTCCTTGTCATACGAAAAAATGGGGTGCTCTTACTCTGCATACAGGAAGAAGAAATCAAGCTTTCCTGAAGTTGT GGTCTTAGTTCCATCAACCAGAATTCCAGTGCAATCTGATCTTCAAAGAGCACTTAAAGGATTAGTTCCAAAGGACCTTG CTGATAAATTATCTTCGCTTCGGAACCAGATAGTGTTGGTAGCAGAAGATACTGGTATTGTATTAACTATTGTCTTTCTT CTTACTTCACAGAGAAATTCTAAATTTCTTATGGAATGAGTAGGAAAGTAAAAATGTTTTTGTGGTCTGAAATTTGAATA TTTGGTGCAGACGGATCACCTATACCTGAATTGAGGCGAGCTTTGAATGAATACTTATCGGTTCTGATTGGACTCACTAA GAAAGGTTCCATAAATTAACACATTATATACCACTCTTCTAAAAAATCTTTCTATTTGCTCTCCATTTCTCATGTTGGTT ACAATTTTCTTATGTTGCAGAGTATGGTCTTGATGGATTAATAGAATTCAAGTGGAAAAATTTCAATGATGGAAGACAAG TATGGCCATAATCTAACTCAATATTTCTTTTAATTATTTTGATCATTGAGTTTTTAGTCTCTTTAATATGGTAATGTGCA ACTTGCAGGATAGCAATATAGCAAATGTCTGGTTTGAAGTGCTATCTGCTGTTCATTTTATGGCTATGCTAGCACTTTCA GAGGCTGATTCACTGATGATTCCAAAGGATCATTCAGGCTCTGGATTCAGGGTTGTATCTTCAGGTTGTGTGCCAATACA TAAGTTTTTAACCTTTAGATAAGGGTCCATAAATTGAGCAATTAAGAGATGAACAATTATTGATCATTGATCTTGGATTT TTTGTACTGTCAGATAACAAGAGGGAAGCAATTGATTTGCTACTCAAGGCATCAGGATACCTGGAGTTCTGTCTCAGGCA TATTCTTACTCGGATGCCCGCCGAAACCAAGTATGTCTCTATAGATTTTGTCTGCAAAAACAGTTTTAGACCAGCATTGA ACAATGAACAGCCAAGTAAGCAATTTACCTTCAAATAATATCCAGGAAAATTTTACCCCAAGATTTGCAGCAAGGTGTTT TGGAGGCTATAGCTATTCAAGCACTGGGCCAGGTATTTAGTGGTCTATGTCTCTGAAATCTGGATATATGTGTACAAACA TTTAATTCTTCTAGTCATTCACATTGCAATGGTAGAATTTTCATCTCCACATTATATCAAATACTATTCCATTCATATTT TGTTGTTCCAATTATTGGATTGTGAGGACGATTTTCGTTTTGTTTTCTCTTCTATTAAAATGCATTAAGGACATTCTAAA ACTGTTGGGAATAAGGGAGGGGACGCGTACACCTAATACCATAAGGTTTTAGATGAAGTATATGGTGTCCAATCAACTTG TGTGGTTTTCTCTTAACTAAATCATGGAGATCTCTTAGGAGTTTTAGGCGTCTCACAACCCAACATAAACATGGAACCCT ATTCTTCATTTTTGATTCTCTTAACTAGTTGTTAATACAGCTTGTAAAACTAGTCTCTGGATTAGGTATAACAGCTCATG TTCATGACAATTTTAGGGAACTGAGATTCAGCTTGGTCTTGCTGTTGAAAGTCAGAAGGCAAGTTTGTCTGTCAAGAGAA GGTTGGCATGTGAACAGCTGATATACTTCAGTCAGGTCCTTACTTCAATTCTTAATGCTTTAAGTTACTAACTTTACATC TCCAACCATTCTTGCTTCTCAAACATTTCCTTTTAACACTAGTTTTTAAAGTTCTGGTGATGATTGTTGTTTCACAATTA ATGTTTTTCTCACTAATATTACCAGGCTTTTCACTGCTTGACTGGATGTGAGTCATGTGACTTGAACCAAGGGCATGCAA AGAAACATCTCAGGTTCATCAAATGGAAATTCCTTGAAACCAAGGTTGGTAACACTATCAATGTGCATGTTTGGACACAC GGTGGAAAATCAGAGTGAAGCCAAAATTACAGTGAACTGAAGCAACTTGGCTTAGCTTTTGCGACCGTCCACCATGATTT TGATCTCACTTTGGTTTTTCACCGTGTATCAAAAAATATTGGTTGAATTCCTCCCACCAAAAGATAAACCTTAAGAGTAT CCAATAATATGAATGATGATGTCCTGATAGTTTTTTATAATGTTGTCAGGCTGCAGCTTACTACTACCATGGTCTGATCC TTGACAAAGGTAATGAACCAAGTGGTCACATCAGCGCAGTGTCTTGTTTTCTTGCTGCAGAAGAACTGCTAGCTGAAAGC AAGAAGGCCTGTTTGAGCTTTTGCCTTGCAGCTCCTGTGACAAGGTAGGTTTGGATCTTCTGCTTTTGTTTGAGAATGTT TTCTGTTACCTTGATCACTATGCGCAAGGTCCAGTAGCCTTATCTTGTATTTTCGAAAGAGGGTGTTTCTACCGCTCGAA CCTGTGACTGCAAAGTCACATGGCAACAACCTAAATGTTGCATCGAGATTATCCCTCTTACATCGAGATTATCCCTCTTA CTAGTACATTGCTTTATCTTACAACTTTTTTTTCCCAATTTTTCAAGGGCTCCTCCACTATGGGGTGCTATGAAGCATTT AAATCAGAAAATTCCTGAAGTTGCATCAAGGAAGTCTCAGATGTATGGCTACCTCTTGGAGCAAGAAAAGTAGGGAGTTT TCTCTGTTACTACTCTGACATTCTCATTTGATGTTCTAACTAAATGCTTTACTACCTTGAAATATAATGATCCATATTAA GGTATCGGTCGTTTTTACGATGACTGCTGAATGCCTAATACAACCCTCCTCCTTTACTGCCTGACATGAAAAAATGGATT TTTTCTAATGATGCAGGGGTCTTCAAGCATTGCCAGACCTACCAGAGTTCCAATTGTCATTACGTCCAGATGATTATGAA CTTCCTGAGATTGATCCAGCATGGGATAGTAATCATTGGGAAACTCTAGGACAACCATTGAAGGAGCACCTTAGAGATAG TGATGAGAATGCAGCTGATTGA
CDS sequence (LotjaGi1g1v0630300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTATGCTAGCACTTTCAGAGGCTGATTCACTGATGATTCCAAAGGATCATTCAGGCTCTGGATTCAGGGTTGTATC TTCAGATAACAAGAGGGAAGCAATTGATTTGCTACTCAAGGCATCAGGATACCTGGAGTTCTGTCTCAGGCATATTCTTA CTCGGATGCCCGCCGAAACCAAGAAAATTTTACCCCAAGATTTGCAGCAAGGTGTTTTGGAGGCTATAGCTATTCAAGCA CTGGGCCAGGGAACTGAGATTCAGCTTGGTCTTGCTGTTGAAAGTCAGAAGGCAAGTTTGTCTGTCAAGAGAAGGTTGGC ATGTGAACAGCTGATATACTTCAGTCAGGCTTTTCACTGCTTGACTGGATGTGAGTCATGTGACTTGAACCAAGGGCATG CAAAGAAACATCTCAGGTTCATCAAATGGAAATTCCTTGAAACCAAGGCTGCAGCTTACTACTACCATGGTCTGATCCTT GACAAAGGTAATGAACCAAGTGGTCACATCAGCGCAGTGTCTTGTTTTCTTGCTGCAGAAGAACTGCTAGCTGAAAGCAA GAAGGCCTGTTTGAGCTTTTGCCTTGCAGCTCCTGTGACAAGGGCTCCTCCACTATGGGGTGCTATGAAGCATTTAAATC AGAAAATTCCTGAAGTTGCATCAAGGAAGTCTCAGATGTATGGCTACCTCTTGGAGCAAGAAAAGGGTCTTCAAGCATTG CCAGACCTACCAGAGTTCCAATTGTCATTACGTCCAGATGATTATGAACTTCCTGAGATTGATCCAGCATGGGATAGTAA TCATTGGGAAACTCTAGGACAACCATTGAAGGAGCACCTTAGAGATAGTGATGAGAATGCAGCTGATTGA
Protein sequence (LotjaGi1g1v0630300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMLALSEADSLMIPKDHSGSGFRVVSSDNKREAIDLLLKASGYLEFCLRHILTRMPAETKKILPQDLQQGVLEAIAIQA LGQGTEIQLGLAVESQKASLSVKRRLACEQLIYFSQAFHCLTGCESCDLNQGHAKKHLRFIKWKFLETKAAAYYYHGLIL DKGNEPSGHISAVSCFLAAEELLAESKKACLSFCLAAPVTRAPPLWGAMKHLNQKIPEVASRKSQMYGYLLEQEKGLQAL PDLPEFQLSLRPDDYELPEIDPAWDSNHWETLGQPLKEHLRDSDENAAD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 286 | 286 | 1.7E-156 | – | |
| PANTHER | 1 | 286 | 286 | 1.7E-156 | ||
| Gene3D | 17 | 272 | 256 | 3.1E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0630300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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