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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038898
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.171s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0630300.1
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT5G14020.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A151T941|A0A151T941_CAJCA BRO1 domain-containing protein BROX isogeny; Found in the gene: LotjaGi1g1v0630300 LjG1.1_chr1 118340209 118345005 -
2 domain predictions
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LotjaGi1g1v0630300.2
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT5G14020.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A1J7HW35|A0A1J7HW35_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0630300 LjG1.1_chr1 118340642 118343703 -
2 domain predictions
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LotjaGi2g1v0174000.1
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q7SAN9|BRO1_NEUCR Vacuolar protein-sorting protein bro-1; TrEMBL-Plants: tr|A0A151T3S3|A0A151T3S3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0174000 LjG1.1_chr2 59156156 59165713 -
2 domain predictions
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LotjaGi2g1v0174000.2
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q7SAN9|BRO1_NEUCR Vacuolar protein-sorting protein bro-1; TrEMBL-Plants: tr|A0A151T3S3|A0A151T3S3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0174000 LjG1.1_chr2 59156504 59165643 -
2 domain predictions
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LotjaGi2g1v0174000.3
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q7SAN9|BRO1_NEUCR Vacuolar protein-sorting protein bro-1; TrEMBL-Plants: tr|A0A151T3S3|A0A151T3S3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0174000 LjG1.1_chr2 59156879 59163997 -
2 domain predictions
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LotjaGi5g1v0198900.1
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A0L9TYL6|A0A0L9TYL6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0198900 LjG1.1_chr5 49632387 49641595 -
2 domain predictions
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LotjaGi5g1v0198900.2
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A0L9TYL6|A0A0L9TYL6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0198900 LjG1.1_chr5 49633033 49640008 -
2 domain predictions
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LotjaGi5g1v0198900.3
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A0L9TYL6|A0A0L9TYL6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0198900 LjG1.1_chr5 49633040 49640008 -
2 domain predictions
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LotjaGi5g1v0198900.4
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A072VNC3|A0A072VNC3_MEDTR Endosomal targeting BRO1-like domain protein; Found in the gene: LotjaGi5g1v0198900 LjG1.1_chr5 49633040 49640008 -
2 domain predictions
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LotjaGi5g1v0198900.5
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A0L9TYL6|A0A0L9TYL6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0198900 LjG1.1_chr5 49633040 49640098 -
2 domain predictions
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LotjaGi5g1v0198900.6
n.a. Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|P26955|IL3RB_MOUSE Cytokine receptor common subunit beta; TrEMBL-Plants: tr|A0A0L9TYL6|A0A0L9TYL6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0198900 LjG1.1_chr5 49634471 49640008 -
2 domain predictions
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