Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0631900.1

Overview

Field Value
Gene ID LotjaGi1g1v0631900
Transcript ID LotjaGi1g1v0631900.1
Lotus japonicus genome version Gifu v1.2
Description Kinase interacting (KIP1-like) family protein; TAIR: AT2G47920.1 Kinase interacting (KIP1-like) family protein; Swiss-Prot: sp|O82259|NET3C_ARATH Protein NETWORKED 3C; TrEMBL-Plants: tr|K7MXM1|K7MXM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0631900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:118572191..118577225) extracted from Lotus japonicus Gifu genome v1.2.

AAAGAAATCAAAATTATAGCAATCAATGTGCCGAATATTGAGCATAACGTTGTGTGGTCGCTATCATCATGGAGCTCTTG TATACACGATGCGTTCAAATTTGACAAAGAATATGCTTAACGTAACGTCTATTGGCCACTATATACACCTGGAACTTGAT TTTCAAATTCTTTACTTGCTTCTTTACACATTACCCTGTTAATTGCTCCCACTAGTCTCTGATAAATTATCATGCTTTGA GGTAATGACACATATCTTAATGGAGAATAAAGATCCAGAATCATGGAGTTGTGCTCATATCCACCATTCTCAGTGGCTTC AAACAACCATATCAGGTCTCTCTCTCTCTCTCTCTCTCTCATACAGGGTTCTGTGTAACTAGTATTTCCAATTTTGACAA GTCATTAACTTTCTTTGACTTGACATTGAGGTTGAAAGCATATAATATAGTTAGGTAAAGAGTGATGGTGGTTGTAACTA TAAGAATGGATGAAAAAAAAAACAGCCAAAATGTTGGTCAAAATAGTCGATTTAGGATTGTCCACAGGAAAGTTCATCAA AGGTTGAACGCATGCATATCTAAGTGTGTATTTTGATATGTTTTCAATTTGGGGAGAAGTGATTATGGAAAAGGGTAGCT TTGTGGGGATATGTAATTCTAGCAGGTTTCAATGTGAATTCAGACATGCTACAAAAACGTTTTTCTTCTAGATTTTGGTA GACTAGAACCATTTGAAAATGGTATTTAGGAGTGAGTTTAGAAGATCAGGTTTGTTTGAATGGTATAAAAGTACAATCAC TTTTTTCATGTAAGCATAGAAATTTTAAGAAAAACTGTGGGTCTCTTATCCAGAATAAATTGTACTTGACAGGAAAAATT AAAAAGTTTTTTCTCTCTAAATCAATTTTACTCACTGCATAGCTTTTGAGAAGTAAAAAAAAGAAAACAATTTCAGTTAA TTCTGTCAGCGTTTGCCATTGGAAACATGATTCAAAGCAAATCAAATAGGCAATTATTATCTGATAGTCATTATCAACAA AACAAAAATGCTGGAACACATGTTTGGAAATCCTTCTACAATTGATTTTAAAGCAAACATCAATTTTGGGAGAGACTTTT ATGTGTAGCCACTGCATGTCAAAATTGATTCTGAGAAAAAACAAGCTTATTCAAACATGCTACCAGCCATCCCTTAAAAA TTTCTGATTTTAAGCCTGGGATGATTGGTTTATTTCTAGGGGTTGTTAATAGTAAAGCATACATTTTTGGCATCATCTTC ACAAGATCTTTGAGTTGTTATCCTGCAGTTTTCACTCAAACTCAGTACTCTTGATTGATTTTTAGATTTGAATGCGAAGA TGGAGGCCATGATGACCATTTTGGAAGGTGGAACCCAAGATCATGTGCATTACAAATGGAAAGAAGATCTCATAGAGATG CTTGAAGAACTTGGCCAATCTTACCGTGTTTTAGTCATATCATATAATCAACTGAAGTCTAAAGCATCCAGCAGGACCTG TCTTTCAGGATCTTCATCATCTTCTGGTACATTAAAAACCAGATCTGCTATCTGCAATAAAACAGCAACAGGCAACTTAG AGGATGAAATACTCAAGCAGGGTTGTAATCGCTATCCCAAATCTCGCAAGGAGCACTCAAATGGAAAATTCAATGGCATT GACATGCATTTTGAGCTTTTAAACAAGCAAGATGATGAATACCATGAATTATCCTCAGCTGGCTCATGCAGCATGAAATT TAAATCCAAACATGAACGCAGAGATTCTCAAATGGAAGAGGTAATTACAAATTTTTCCACAGAGGAGAATATTTTAATGA ATCTTGAGGATTTGGAATTAAATGAGAAAAATGAAGATCCATCAATGATCAATTTCAAATTTGACAGTAAGTGGACAATG TTGAAGTATCAAATTACAAAACTTACAGAGGATAATCTGCATCAGTTGGTAGAGTTGGTCCAAAGAAATGATGAAAAGAG AGAAACCATTAAAAGGCTTCAGTTAGAGGTGGAAGCTTTGAAGCGTGAGAACAAGGTCCTACAGACTTCTTTAAGGAACT CCAATGCTTATTCAGAACGCAGTCAACCTCAGATATCAACACCACGAAGAATGTCTATGGCCAAGATCTTCGAAGGTTGG TCTCCGTGATATTTTGTAGACTTCACATCCTAAGAGTCCGGTATTCCAACCAAGCAACAAACTCTTATCGATAATTCTGG AAGAAGTTAGCTATTAGATAAGCACAATAAGTACCCACAAGAGTTATAACATGATGCTCTGGCAATTTGTTTTATTGAGC TTTTGTAGTATAGTACAGTTGCGTAATATATTTGAACTGGGAGTAAGCCATCTAAAAGGCCAGTTGAAAATCTCTTCATT GTTCTTATTGGAACCGATTGATCCATACACATATTCACAAATGTAATATCGAGATAACTGGATCAATCATTCAACACAGA TTCTGATTTCTGATCCTTTTTCTCTCAGTAACTGTCACCAATAGTCTCCACACGAACACAACCCATCCTTGAAATGATGA AATCGCTTTGAATCTCTGATAACGATTTCTCTATTTACTATTTTGGAAATTAATTTAATTGCAATGTGGCAGTCACCACA AATCCTAAGATTTTTTATGATCTGGATTATTGACCCAGGAACTGAATTCATGATCCCAAAGGCCACGGCTAGTTTCTCAC TATGAACTCTTAGAATCATTCCTTTCTCTTCCTCATCAACGTCATGAAGCACCGATGTTACATTTGGCATATATCCAAGT TCTTGCAGCCTGACATTTAATTTGTCCCAATACTCATAAATCTTCTCATGCTGAGGATGCTCTTTGTCTCCAACTAAAAA TACATGTATCCTACCTTTAAGTTCAACTATGCTGAACCCAGGGGTTTTGAGCATTCCCTTACTCTTCATCAATATTCTCA TCCTCTCAACATCATTCCACCTTCCAGCATCAGCATAAATATTGGAGAGTAGAACATAATACCCGCAGTTACTTGGATCT AACTCGAATAGTTTTTTTGCAGCCATCTCCCCAAGTTCCAAGTTTTTATGCATCCTGCAAGCCCCAAGAAGAGATCCCCA CACTATAAAATCAGGTCTCACATTCATTTTCTGGATCAAACTATAAGCGTCATTAAGATAGCCAGCACGCCCAAGGAGAT CAACCATGCATGAATAATGCTCAATCCCAGGTTCAACATTAAATTCACACTTCATTCTATTAAACCAGTGCCAGCCTTCT TTCAACAGACCAGCATGGCTGCAAGCAGCCAAAACCGACACAAAAGTAATGTAATTCGGTCTGACTCCGGATCTTATCAT CTTGTAGAAGATTTCCATAGCATCTTTTGCACGGCCATGCATTCCATAACCAGCCACCATAGCAGTCCATGACTTTACAT TCTTCTCTTTCATGCGATCAAATGCCTTCCTAGCCATCTCCACTCTCCCACATTTGCAGTACATATCAACTATAGAAGTA CCCACAAACAAATTGTCCTCCAATTCCATCCTTATAACCTATAGACAAAGAAAACAGCTAGTGAGACCGACATTTCTCAC TTAGGTCCTAGCTAAAAATTTGTACAAGCATACAGTTACAACAACAGCAACATTTTAACACCAGATGGAGTTGGCTACTC GGTTCAAATGATGCCATAATATTGTACTATAATCACATCATTGATCCATGATGTTATAGGGAGGTAACAAAGTTTTAAGT AGCTTGGGACCTGCTATGTAATGCAACCTAGACTGAGTTGTACAAACAAACAATAATGACAAAAAAATATGATAAATAGT TATAGCCAAATTATGTGAGATCATAAACTAGAACAATGGATCATGTAACATACCTGATCATGTATGCACTTCCCTATCTG CAGAGCTCCTGAATTTGCACAGGCTAACAACACCGTAGATAATGTGACACCATTATATCTAACCTTGCTGCTCTTCACCA TATCACTAAAAACACTGAAAGCTTCTGCTGATAATCCATTTTGTGCATATTCAGCAATCAGAGAGTTCCAAGAACAAGCA TCATTCTCCTCCATCCCATCAAAAACCTTCCTAGACGCACCCATCTCCCCACACTTAGCATAAGCATCCATCAAAGTGTT CCCAACCACCAACCACCCCTCAAACCCCCTCTTGATCACAAAGCCATGAACCCCTTCAGTCAAACCCTTGGAGCACACTC GAGAACACGCGGAAATAACACACCCCACAAGAACCGAATCCACCAAAACACCCTCCGCGCACCCCATACCCCAACTCTCC TCAACCAACAGCTCCTTGAATACACAAACGGCTTCGCGGGCACGATCATTTTGCACACAGCCAGAAATCATGGAGGTCCA GGAAACAACATTTCTTTCAGGAATTTCATCGAACAGCTTCCGCGCATCTTCCAAGTGGCCACACTTCGCATACATGTCCA CCAGAGCAGACGAAACGAACACGTCCAATTCAAAGCCAAACACAAAAGCTTGCTGGTGGGTTTGCACTCCAGCGCGGAGG TCGGAGAGTGCAGAGCATGATTTAATGGTGCAGGGGAATGTGGAACGGTTGGGGTGAAGAGAGAGCTTGCGCATGGAGGA GAAGGCGCTGAGAGCCTCGACGGAGTCGCCGCTGCGGGCGAGGTCGGCGATGACGGAGTTCCAACTAGAGACGCTGGTTT TGTCGACGTATTTCCCGAACATGCTCGCGAGGTTCGCGGTTTTGGTCGCCGTCGATGAGTTTCCACGTTTTCCATGAGGA GATGCTGCACGAGCACGAGTGATTCTCGACACAGATGAAATCATCGTAAGGTGTTGTGGTTTTCGTCTCCATGCATAGTT AGGTACCTTGTTCACTTTTACAATCGTTTTCTAGTTAAAATTTTGGAGGGAAGTCTGAGTTCCATGTTCTTAGTTTAGTT TTTAGGTGTTAACCAAGGTAAGGTACTAATAATCGATAGTTGTGAAACTGATCATTGACTTATATTGTCAGCGTG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0631900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACACATATCTTAATGGAGAATAAAGATCCAGAATCATGGAGTTGTGCTCATATCCACCATTCTCAGTGGCTTCAAAC AACCATATCAGATTTGAATGCGAAGATGGAGGCCATGATGACCATTTTGGAAGGTGGAACCCAAGATCATGTGCATTACA AATGGAAAGAAGATCTCATAGAGATGCTTGAAGAACTTGGCCAATCTTACCGTGTTTTAGTCATATCATATAATCAACTG AAGTCTAAAGCATCCAGCAGGACCTGTCTTTCAGGATCTTCATCATCTTCTGGTACATTAAAAACCAGATCTGCTATCTG CAATAAAACAGCAACAGGCAACTTAGAGGATGAAATACTCAAGCAGGGTTGTAATCGCTATCCCAAATCTCGCAAGGAGC ACTCAAATGGAAAATTCAATGGCATTGACATGCATTTTGAGCTTTTAAACAAGCAAGATGATGAATACCATGAATTATCC TCAGCTGGCTCATGCAGCATGAAATTTAAATCCAAACATGAACGCAGAGATTCTCAAATGGAAGAGGTAATTACAAATTT TTCCACAGAGGAGAATATTTTAATGAATCTTGAGGATTTGGAATTAAATGAGAAAAATGAAGATCCATCAATGATCAATT TCAAATTTGACAGTAAGTGGACAATGTTGAAGTATCAAATTACAAAACTTACAGAGGATAATCTGCATCAGTTGGTAGAG TTGGTCCAAAGAAATGATGAAAAGAGAGAAACCATTAAAAGGCTTCAGTTAGAGGTGGAAGCTTTGAAGCGTGAGAACAA GGTCCTACAGACTTCTTTAAGGAACTCCAATGCTTATTCAGAACGCAGTCAACCTCAGATATCAACACCACGAAGAATGT CTATGGCCAAGATCTTCGAAGGTTGGTCTCCGTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0631900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTHILMENKDPESWSCAHIHHSQWLQTTISDLNAKMEAMMTILEGGTQDHVHYKWKEDLIEMLEELGQSYRVLVISYNQL KSKASSRTCLSGSSSSSGTLKTRSAICNKTATGNLEDEILKQGCNRYPKSRKEHSNGKFNGIDMHFELLNKQDDEYHELS SAGSCSMKFKSKHERRDSQMEEVITNFSTEENILMNLEDLELNEKNEDPSMINFKFDSKWTMLKYQITKLTEDNLHQLVE LVQRNDEKRETIKRLQLEVEALKRENKVLQTSLRNSNAYSERSQPQISTPRRMSMAKIFEGWSP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51774
1 84 84 20.35
IPR011684
PANTHER
PTHR32258:SF15
6 303 298 3.1E-87 –
PANTHER
PTHR32258
6 303 298 3.1E-87 –
Pfam
PF07765
14 77 64 2.5E-13
IPR011684
Coils
Coil
238 272 35 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003779
Molecular function Actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0631900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…