Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0637800 |
| Transcript ID | LotjaGi1g1v0637800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | INO80 complex subunit D; TAIR: AT2G31600.1 INO80 complex subunit D-like protein; Swiss-Prot: sp|Q54J07|IN80D_DICDI INO80 complex subunit D; TrEMBL-Plants: tr|A0A1J7IFN4|A0A1J7IFN4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0637800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:119351181..119356801) extracted from Lotus japonicus Gifu genome v1.2.
GATTTTCTATTTTTCTTTTAAAGAAGACAAAGCCAAAGCTTTGAAATTGAAATCCCAACTCCAGATTTCCAGCAGAAACT CTCTCTCTCTCTCTGACTCAGCCAACCAACCACCGCGCCATGTTCGAACCACCGCCTCCTCCGCCATCTCCGATGGCCAT CGACGGCGCCGACCAAGACGCCGTGCTAGCAAACTCCACCGTCCTATCCCGGAGCGAGGTCATCGCTCGGCGCCTCCGCC GAGTGAAACAACTCGCGCGCTGCTACAGAGGCCACTACTGGGCTCTCATGGAAGATCTCAAGTCCAAGTACAGAGACTAC TACTGGACTTACGGTAAGAGCCCCTTCAAGGACGACGACCACGGTGGCGCAAACGGCACCGTCGTTTCTGAGGAGAAAGT TAACGGCACTGCTGACCATGCTTCCGCCGCCGCTGGGGTTGATTTTGTTCGCTGCGCTTCCGGTGGGTGTAAGACGAAGG CCATGGCTATGTCTAGGTTCTGTCACGCGCATATAGTGTTCGATACTAAGCAGAAACTCTATGTTGGATGCACTACCGTT GCCAAAAAGTGAGTTCCCTTTTCCCTTTTTTCATTTTTTTTTTTGAAATTTCTTGTTTTATTTTGCAGATTGTGAAATAA TTTGATGTTATGTAGAAGAAAAGTAAGAACTTGATTTTGTTTTTTTGTGGGTTTTTCTGTTTTTCCTCTTTGGATTAGGG CACGTGTGTGGTGTTGTTTGTGGTTGATTTGACTTGATAGTTTTTCCTGTGTTGATGAGAGAAATAGTTCAGTGTTCATT TTGTGATGTGCCTATGGATATTGGTTACTTTCCTTTCTCCTTGAATGTGCATTTTTGAGTAGTCAGAATCTGTTCAAAAT TGATTTTGGAAACCCTTCTGCAATTGAGTCTGAAGGGAGAAGCTTCTTTGAGTAGCTTTGGGGTTTTAGAATTGATTTTG ATGAAAAAGAAGTTGATTTGCCTTTAGTTCTTGTTTCAATGATATTATTGCAATGTGAGCGATAATACTTTTGGTCAATG ACTAGTTCAGTTATGCTCACCTCAATCTTTCTTCAGTTCTTGGACGAAAACACGATAAAGAATAGTATTTGCCAATGAAT ATTTTAATTCTTAACTCTTGATCTGCAATGGACATTTATTCTTATGGCACTCACCTTTTGTTAGTAGTCTAGTTTACGGA CCAAAAAAACCAGATTCCTGTGCCAGAAGGAGAAGTTTGATTCAGAATTCTTGGTAGTGTATAAGTATTGCACTTAAGTG ATCAACCGTGTCTTTCAAATATTGTCACATTAGCTTATATATCAAGATGTCACCACACAACTTCCAACACCTATCTGTAG TGTAGACTTCAGTTGCTGACTTAATTTTGTTTCATGTAAGTACACGTGTAGGGGTGTTCAGTTCATCACCTCATCACTGC ACCATCTTTCTCTATACAGTTATTCGATTCTACGCAGGAAATGTTTCTGTTCAAACACTCATGTTTTTTGCATGTCTTAG TAGTCTTACCAATATAATATCTTGGATGCTTGTTCTGGATTGGATTTCTGGTTTTGTCATTATTTATATAATTGGTAAAT TGATTTTGTCCTTTTCTTCCTTGCATGCATATTGTTTTACTATTTGTAAAATGAACATTGTCTAGAGCAGACACTGATAA GGTTTTTGGTTTCATGCAGCTTGCCAACAGGTCCATCTTTTTGTAATAAGCCAGTATTGACATCCGTGGTACCTCGTTCA TGCCACCAGCATTATCAATTAGGTGAAAAGTGCTTGACTCGTGCAATAAGAAGAGCAGGTTATAATATCCCAATTAATCG TAAGCCTAGTCTGCCGTTGCATGTAGTGATTCCTGAATTTGTTCGCGAAATTCAAAATAAACGAAAAGTTGCACTTAAAG CAACTGTACCTAAACCTGAGACTAAATGAAAAGCAAGAGTAAGATGCTGATAATTGAAAAGGTGATTGATTTACTAAAGT ATATAGGGATGGAAGTTTCTAATATCTGTGAAAAAGGATTATGATTTGATATTTTGAAGCATCAAGTGTCAATAAAAACT GTACTTAGATGTCTGTAAATGTAAGTATTCTTGGTATGTCCGTAAATTTGTGTTATGTTTTCATGCTCAGTCATTATAAT GCTCTTTGTCGGTACCCTATGAACATCATCCGAATATATTCAATTATTGCATGTTATTTACAATAGGAATTTTGTTGGCA TGGATTAAGAGTTTCAACCCAAAATTTCTTGATAACCATATGCTATCATTGAATTTTAGCATCTACGCCTGACCTCTCTT CTTTAATGTGTTCTTCAAACCCCTTCTCCAAGCTGCAATCACTTTCTTCATCTCTCCAAGAAGGTCAGGAATTCCCTTCT TAATTTTTGCTAACAGTGGATAGTTCGTTGGTTCGCCCATTTTTCTTGCCAATCATCTGTCCTTTATGGTACCCATGGCT CTATGATGGAGCTCTCATACTAATTGATAGGAACAACCCTGACGAAAAAGAAAGACTGATTTTACTGTAGGGAAACTAGA TTCTATTCGAGAGAGTCTCTCCCAATTCCCAATTACACATGTTCCCAAAGATGCTAACTCTCTTATGATAGAATTCGACT TAAACCTTCTATTACTGAGGTCTATAGGAGGCGCCACAATAGGGGTGCTAACGCTGCCTTAGCAAGCACTGTATCTGATG GTGTGCGCTAAACCCCTGAGCGCTAGTTCTTAGCCAAACAGACTTGGGCTTTTCTATTATTATTATTATATTTTATTAGT TTATTTGGGTTTAGTGTATTTTTATTAGTTTATTTGGTTTAGTATAAATAGAGGTGAATGTACCTCTATTAGGATTAGTT CTCGGGAGAATTAGGTTTTGGTGGTTGCCTGGTTGGTTATTGGATACCAGTTTGTAATTCTTCTTGAGAACATTCTTCTT CTCTAATAATACTATATTCCAGTTTCAATTCAGAACTCGATTGTCTTCGATACGGATTCAATTACTGTTTGACGATTTCT TCCTTATCCATTGGGTGCCAGTTTTAACATCTTATTTACAACCTCATCTCTAACTCTCTAAACGAACACCTTCAAACTAA CTAAGCTACTTGTTTGCTAACTAGCTAAGTAAGGGGTTACCTATCCCAAAATCATTTCCGTCTGGGCACTGGATAGTGTT CACAATTTCTTTGTAAAGAAACTAGATAGGATTGCTCGATAGATGTTCTAGTTTTGATTGTGCTCCAAATTGACAGTCTT GCTCCTAAGTGTATTATGACTTCTTTGGTTATTGAATGATTAAGCCAATTTACTCTTTTACTCGAAGTGTATTCATGATT ATTCGATGCCTTGAGTTCCATGAATACGAAGAGTGTGTATTCAGCCATGTATAATGAGATATATTGTCTAGGTCTGTCTT AGTCAGTGTTGTTAATGGCGGATGGTGGAGAGCCAAATACCCGGCATGAGATTCTGCCACGGCGGATATTTGATAACCCT GGGCTTAGTTCATTTTAGAGGGGATTGGTTTGGTTTTTTTGTATTGCAAGGATCTGAGATACTTTCATGGGGGAGCTTAG AGACACTCTGAGCTGTGTTTGTCATTGGGTTATAGGTTTCATAGATGGTGTATGTTGTATGGGTAGCTTATACAGGGCAA TATCAAGTTGGCCTATCTTGATTCATATACCACATACTAGGTTCCGTAAGATGCCAATTCTCTTATTTATTGTAACACTA ACAGAACCCATTAAGGAAGTAAAACAGAAGGTGAATTCATTTTCTTGGTTGCAAGACTTATTTGAAACAAGCTCAAGCTT TCTTAAGGCATCCATCTTCATACTGCTTGTCTCCAACTATCTCTAGTTAATAGCGGATGCATAACACCGCTTCTCATTAT TTCATGGTATTATTCAATTTGAAAACCTGCTACTATTCACCAAGGCTTGCCCCACATGATGCTAACTTTCCCTGGCTATT TATGGTGCATTTTGGGTTGTAGTAATTGCAGTAGAGTATGATAGTACATTATGCTAAGATTCATATACTTCTATCTACTT TCAAAGTTTTGAACTACATATTGATCAGTATAGGAAGCAATAAAATGGTTTTCCTTGCAAATTTCATGATGGAGATTTGG TCTGTGGGGACTCCCCTCATAAGAGCCCTTCTTCATATTCCGAATAGAACCTGCATGGTTTCTTTAGTAGAAGTGTTTTT TTTTTATCAAAGTTTAATCCCTTGCTAAATTTTCACTTCTTTCCTCTACCCTGAGTTGTGGGGTTCCCCCCTACCAAACT GAATGAAGATTTGAATGGTGATCCTTAAAAGAATTGAAAATGCTCCTTACGAGGTACTTTACTTATGCTTGGTTCTCTTG TTTATTCTGGTAATAATTTGAGTGGCTTTTACCTTTGTTTTAATCATTTAGCATGCCCCAAATGCCATTTAGTTGAATTC TTGATTGATTGATTAGTCATATGACATTTTTGTACGTAGTAATGGTACATACTACATTGATGGATCATTCATAGCATTAT AGTTATATGTGGTAATGGTACCGCCACTGTGGCTTACTATTTCATAGAATTTTAGTGTTGGCTTAAAATGGTCTCAAACC GCATGATGATAATAGCAGAACATTCCACATCTTTGATGATGGCTTCCTGCTATTCAGATGGTCTAACTGCTGATTACCAC GCTATCTAGAACTAAGTTTCTTGTACTAAGTTCATTTCTTTTTTAACCATTGTTTCAAAAGTTGAGTGAAAATTTCATAT CAGCAATTATTCAACTTATTTCCCCTTTGACAGCACCGGAGCACACGGCCATTGCTCCCATGGAGATGCAGAAAAGGTGG TCTTTTCACCAGTTTCCCTGTGATAGAAACCTGTGTGCATATAACCTTTTTGTGCATTTTCTCAAATCTATGCTGATCTT GGCTCTATAAAAGCATAATATTTATAATTTAGAGAAATTAAGACAAAGCTGCCTTCGATCAGATTGTGAGAGATATATGG GGAGCTAACTTTTCTGGAGCTAACAGTGAGGATCATTGAAAAAATGATTTGATGGGGGGTTTTTAGAGGGCGAGGGAGAT AAAAATAAATGTTTTATTTGTAATTAAGAGAATTTTATAATTATGATAAAAATAAATGTTTTGTTTGTCTCCCTTCGAAA ACCTTCCAATTTCCAAAATCAAGTTCTAAAGGTCCATCTAGCACACTTTCACATCAATGTCTCTGACTGTTGGTGTGTAC TAGTTTTACATGGGGTAAATAGCCAACTTGGTCCCTGAATGTGTTCATCGACTTCAACTTCGTCCCTAAACTTTAAAAAT GACGTTCGTAGTCCCTGAATGTGGCAAATCTCCCTCATCAACAGTCCCTGGGTTAAAAAAAGCTCACGGCCGTTAACGAA AGTGTGACATGACCTTTTTTTTTATAGCCAGAGGTGACGTAGCATGTGAACCAAGAAAATAAAAAACCAAAACTATCTGA AGATCAAACCATTGCTTGCAAATCAAGATCTCCAACAAAATCAAAATCTTAAAGAACCTTAATTTCATGGTGGTGCGAGC AGCAAAGGGGGTCGACGCATA
CDS sequence (LotjaGi1g1v0637800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCGAACCACCGCCTCCTCCGCCATCTCCGATGGCCATCGACGGCGCCGACCAAGACGCCGTGCTAGCAAACTCCAC CGTCCTATCCCGGAGCGAGGTCATCGCTCGGCGCCTCCGCCGAGTGAAACAACTCGCGCGCTGCTACAGAGGCCACTACT GGGCTCTCATGGAAGATCTCAAGTCCAAGTACAGAGACTACTACTGGACTTACGGTAAGAGCCCCTTCAAGGACGACGAC CACGGTGGCGCAAACGGCACCGTCGTTTCTGAGGAGAAAGTTAACGGCACTGCTGACCATGCTTCCGCCGCCGCTGGGGT TGATTTTGTTCGCTGCGCTTCCGGTGGGTGTAAGACGAAGGCCATGGCTATGTCTAGGTTCTGTCACGCGCATATAGTGT TCGATACTAAGCAGAAACTCTATGTTGGATGCACTACCGTTGCCAAAAACTTGCCAACAGGTCCATCTTTTTGTAATAAG CCAGTATTGACATCCGTGGTACCTCGTTCATGCCACCAGCATTATCAATTAGGTGAAAAGTGCTTGACTCGTGCAATAAG AAGAGCAGGTTATAATATCCCAATTAATCGTAAGCCTAGTCTGCCGTTGCATGTAGTGATTCCTGAATTTGTTCGCGAAA TTCAAAATAAACGAAAAGTTGCACTTAAAGCAACTGTACCTAAACCTGAGACTAAATGA
Protein sequence (LotjaGi1g1v0637800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFEPPPPPPSPMAIDGADQDAVLANSTVLSRSEVIARRLRRVKQLARCYRGHYWALMEDLKSKYRDYYWTYGKSPFKDDD HGGANGTVVSEEKVNGTADHASAAAGVDFVRCASGGCKTKAMAMSRFCHAHIVFDTKQKLYVGCTTVAKNLPTGPSFCNK PVLTSVVPRSCHQHYQLGEKCLTRAIRRAGYNIPINRKPSLPLHVVIPEFVREIQNKRKVALKATVPKPETK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 231 | 228 | 2.8E-97 | – | |
| PANTHER | 4 | 231 | 228 | 2.8E-97 | ||
| Pfam | 112 | 174 | 63 | 1.2E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Histone acetyltransferase complex | A protein complex that possesses histone acetyltransferase activity. |
Expression pattern of LotjaGi1g1v0637800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…