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LotjaGi1g1v0643100.3

Overview

Field Value
Gene ID LotjaGi1g1v0643100
Transcript ID LotjaGi1g1v0643100.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Adenylyl-sulfate kinase; TAIR: AT3G03900.1 adenosine-5'-phosphosulfate (APS) kinase 3; Swiss-Prot: sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3; TrEMBL-Plants: tr|I3SLM5|I3SLM5_LOTJA Adenylyl-sulfate kinase; Found in the gene: LotjaGi1g1v0643100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:120024016..120025559) extracted from Lotus japonicus Gifu genome v1.2.

ATGTCAACTCTGAGCAATGCAACAAATATATTTTGGCAAGAATGTCAAATAGGAAATCCTGAAAGGCAGAAGCTACTTAA CCAAAAGGGATGCGTTGTATGGATTACTGGACTTAGCGGATCAGGTTCATATTGTTAGTGGCTGATTGCCTATGTCTTTT CAACATTGGTTCAAGATATCTTTCTTTTTTTTAGCACGGGAAGCATTATCTGTTATTGCTGTTTGTAATGCTTATGCTTT TCGTTGTGTTTTAGTTGCTTCCTGAATATAAGATTCCCCTTTAACTTACTTGATCTGCAGGAATCTAAGATTCCTGTAAC AAGTGTATGTGTAATGTGCCTACCACATGCCAGATTGATTGTTTTCTCTTTGGTTCAGGAAAAAGCACATTAGCATGCTC ACTAAGCAGAGAACTGCACTCAAGGGGAAAGTTATCTTATGTCCTTGATGGAGATAACCTCCGACATGGACTGAACAAGG ATCTTGGTTTTAAACCTGAGGACCGCACTGAAAATATTCGCAGAACTGGTAAGCTTGTTCCTATGAACAAATTGTTTAAA GAAATGAGTAACATGAATCTGAAATCAGTTTTATCATGTTGATTATTTGTTATGTGCCAAGGATAGACATCAGAGTGATT TCAGTAGTCTAGACTTGCATGATTTTCATCCCCTGGAACAACCTATAATAGCTGTCCAGGAATTTTTGCTATCAAAAACT ACATAGTTGAATGAGTGAATAAAAAGAATAGAAAGTCATAGATGATATCTGTTTTATCATGGCATTTTTAGTGCCCTGTT TTTCAGAAGATGAAATATTGCAAGAAATATTTATCTGGTCATATCCAACTTACTTAGATGTTTGAGTAATATAGAAGGTG TTTGCAAAATGAAGCACGGGCAATTGCTCACATTAATTGGATGCATGTTACCAATTCCATAACCGATACTTTGTCTCTAT ACTGTGATGTTTACCTGCTTCAAAAATCTGTTTCTATATATAATAGAAATGATGCACATGCAGTTTTATGCTAGCTGGTA TGTTAAAAAGTCTGATGCATACATGTTTTTAAAGATTTTACTGATCAGAAAATTATTTAATTCAGGAGAGGTGGCAAAAC TATTTGCCGATGCTGGTCTAATATGTGTCGCCAGTCTGATTTCTCCCTATAGAAGAGATCGGGACGTTTGCCGTGCCATG TTGTCTGATGCCAATTTTATTGAGGCAAGGATCCTTTCGACATTTCATCTCATTGGTGTATATCGGTCTGCATTATATTT GATAGTGGAATTGTAATTACAGGTATTCATGAACATGCCTCTGGAATTGTGTGAGGCACGAGATCCGAAAGGCCTCTATA AGCTTGCTCGTGCTGGAAAGATCAAAGGTTTGCTTCTATAATTTGTTTTTCCAGCACACCCCAACCCTGTAAAATAAAGA AACTGAAATTGAGACATAGGAAGAAATGACAAAAGATGAAGCCAGCCCAAAATTAAATTTATTCTGCATGGTTCACTAGG GTAGGGTTGAATGCATTACAATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0643100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCAACTCTGAGCAATGCAACAAATATATTTTGGCAAGAATGTCAAATAGGAAATCCTGAAAGGCAGAAGCTACTTAA CCAAAAGGGATGCGTTGTATGGATTACTGGACTTAGCGGATCAGGAAAAAGCACATTAGCATGCTCACTAAGCAGAGAAC TGCACTCAAGGGGAAAGTTATCTTATGTCCTTGATGGAGATAACCTCCGACATGGACTGAACAAGGATCTTGGTTTTAAA CCTGAGGACCGCACTGAAAATATTCGCAGAACTGGAGAGGTGGCAAAACTATTTGCCGATGCTGGTCTAATATGTGTCGC CAGTCTGATTTCTCCCTATAGAAGAGATCGGGACGTTTGCCGTGCCATGTTGTCTGATGCCAATTTTATTGAGGTATTCA TGAACATGCCTCTGGAATTGTGTGAGGCACGAGATCCGAAAGGCCTCTATAAGCTTGCTCGTGCTGGAAAGATCAAAGGT TTGCTTCTATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0643100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSTLSNATNIFWQECQIGNPERQKLLNQKGCVVWITGLSGSGKSTLACSLSRELHSRGKLSYVLDGDNLRHGLNKDLGFK PEDRTENIRRTGEVAKLFADAGLICVASLISPYRRDRDVCRAMLSDANFIEVFMNMPLELCEARDPKGLYKLARAGKIKG LLL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11055
1 161 161 5.0E-98 –
PANTHER
PTHR11055:SF36
1 161 161 5.0E-98 –
Gene3D
G3DSA:3.40.50.300
6 162 157 1.9E-66 –
TIGRFAM
TIGR00455
12 161 150 3.5E-62
IPR002891
SUPERFAMILY
SSF52540
28 159 132 2.12E-28
IPR027417
Pfam
PF01583
29 161 133 2.5E-60 –
CDD
cd02027
32 160 129 9.54059E-88
IPR002891

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000103
Biological process Sulfate assimilation The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.
Subterm of
GO:0004020
Molecular function Adenylylsulfate kinase activity Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0643100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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