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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0643400 |
| Transcript ID | LotjaGi1g1v0643400.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transmembrane protein, putative; TAIR: AT5G18130.1 transmembrane protein; TrEMBL-Plants: tr|I3S7H1|I3S7H1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0643400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120084301..120090169) extracted from Lotus japonicus Gifu genome v1.2.
ATAAGATCTACTATTTAGTACGTGAGCATAAAACGATTGATTAGTCACATAACTATCGGTCGTGATAGAGTGGTGTCTTA CATAAGAGGAAAAATCACTCACTCAAACCAGGTCTAACATCATGCTATAATAGCAACAAAACACCATAATAATGGTGGCT CCTTGCTCTTGTTAGGAGTACTAAAATTCCACACAAAACAAAAGCCACCTTCTTTGATTCAACAAATTAACTCTCAGTAT CCAAAAACCTTTTCTTTTTTTCTTTCTTCCTAGCTAAACCAAACCCTTTCTTTTGATTTTGATCAATCTTCCAGAATCTA GATCCAGAAGAATCTGGTGAAGATGGATACTACTAATGATTGGGTGCTCCTTTCTGATGATGGCTCCCTTGATGGTGGTG ATGAGAATCAGATTTTCCTGGGAAAATCAAACCCAGAATCAAAAAGTGATTTTGACATGAATTACTTCTACTGCACCTCA CCAAAATCAAGGGATTCTTCCACAACACAACTTCTCCATGATGATCCAATTCAATTTGTAGAAAACACTGAGGATGATCA TGTTGGAGACAACTCAGACACCACCTCTGAGAAAATCAAAGCTGTTGTTGTGGAAGCTGATGAACAAGAAACTCTTTCTG TTTCACAGTTTTTCTTGCAGTTAGAAAATAAATTTGCCGACATGAAAATGGATTCTCCAAAATCCAGTCCTAGAGTATTG TTTCCTCCTCCTCTTGATGCAGGTGCCTTGAAATTTGAGGACAAAGGTGAGGCTATGGAGGTTATGGTCTCTCCTAGAAG GAAGGTTGAGAATGAAATGGCTACCATGGACTGTGACAGAGAAGAGGTGGACCCCACTGATGGTTTCAATTTCTGGAAGT GGAGCTTGACAGGGGTTGGAGCTATCTGTTCTTTTGGTGTTGCTGCTGCCACCATCTGTGTGCTGGTTTTTGGAAGCCAG CAAAAGAACAAATTCCATCAGAACCATAAGATTCAGTTCCAGATCTACACTGATGACAAGGTCAGCAATTGTCTCAATTT TTTGTTGGGTTTGTTTGAACTTATCTGTTAATATTGATTTAGATATGTAGTTAGTTCTATGCTTAATTTAGAACAAGATT GTGATGGAAGACCTAATCCTATCATTTAAATGATGTCATTAAAAATAGGGTGTGAGGGAAGAAAAGGTATTTGTTTATTT TGCATTAAGTGTGCAAACTCACTATTTTTGTGGATGTTTAGATAAACAACCAAAATCAAAACTGGACACACTTCTTTTAG CTAACTTCTTTTAGCCTTTGTTGTTTTTGTTGTCCACTGTGGATTAGGTCCAAATTTCAATGATTATTACTGTCTTCCAA TTAACTTAATTAACTTTTCATCGAGTTAAAAGGATGTGAGTGTCTCGACACGTAGGTTACTGCCATATGACTTTATGATT AGTGGCGGTGAGATCAGCCTCTTGCTAAAAGAAATGCAAGGTAAGAATGACTGCATTAGATCTACAAAGTGGTTCTGACT CATCCCTAAATCAGCATAGCGGAAGCTTAATAGCACAAAGTTCGCCTTTTCTTAGTTCAAAGGATATGTTTGGATGACTC CAGTACGCATGAATGTTAGCATGTATCTTAAGATAATAAATTATTGAAACTTTTTCATGAATCTAGATGAAAGTGGGTTC ACATTGCATTATTGATATTGATATTCAAACACACAAAATCATTCTTAATGAATTTGCAATATATATTGCTTTTACCCTTA CACTCGCAACCAAACATGCACTACTGATCCTTGAATATTGAATGATTGAAATGATCCTCAATTGTGATTGCAGAGGATTA AGCAAGTGGTACAGCAAGCAACCAAATTGAATGAAGCAATTGCGGCAACAAGGGGTATTCCACTTAGCAGAGCTCACATA ACCTATGGTGGTTATTATGAAGCACTTTGAGACATGATTTCGTGCCTTCATGGAACATTTGGATTCCACAACCTATGGCT AGGGGCACCATCTTCTACTATATCGTCTATCATATGGTTTTGTAAATAAAAAAATGATGGATGGTGTATTGTAAATTGAA TCCCAGATTAGGGGCTCTTTTATTAATATTATTTTGTCCTTTTGGGTTTGAAGGATGAAAAAAAGTTTGTCTGGTAGTTG CCCCAAGTTATGGAGCAATTGTTTTTAATTAGTTTGTTTTCTTGGTCATCAAGTTATGGAGCAATTGTTAAATGAAAGGT TCTTTTTTATAAAGAAAGTGAGGTGGTGCCGTGAGAATGGTATGGAAAGTAGAAATCTTATAATGTTAGGCATGCTCGAC CAAATGCTGACATGAGTAGTTTTGGAAATAGTCTAGAAGAAAAAGTAATGTTATGAATTTAATGCATACCTTTATTGATG AGGAATTGAGATCCTCTCATGAATAAGAAAATTCTCTTTTAAATTGTGTTTATTACCTCTCGCTTCATATTTCTGTATTA AATAGCTACATATTTAAGACCCTTGCTGTGAACATAATCAAGACTACAAGAGCTTTGATGTTAGAAGGAAATGTGGATTT CTTTGTCACCAATTACCCTACAACAATGTTTAGAAGAAAAACTTAACTCAATGCAAGAGCTTCAAGATCTCCAAGAAGAA AATGGAATAAAATTAACGTATAAAAATCATATAACAGATACCCTTATCAACCTGATTCATTGTTGGGCAATGGAAAACTG CAGATGTAGGTTTAATGTGTGAAGTCATGTTATTTTGCAAAGTATTAAAGGGAAATAAAATGTCATTCAAGTAAGAAACT TCAAAAAATAAGAGTTTTTGGGTACCTATGTTGATATATTTGTACCCGAGCTTGTAAAGATTATTAGAAAACCAATACAT CATCTGTAAATAGACACAAAAAATTTACAATCAGATTGAACTCTTAGTTAAGAGGATGGAAATCAAACAACTATCGCATA GAAGTTGTGCCAAGGCCATTACCAAAGAGTTTTCTTCTAAGTTTTTTTCTTTCTTTCTGTAGATGCATGTTATTAAATGA AAGAAATCCTTAGTTTTCAATTTGCATACTCCTTTCCTGTAACGGGCAAAATAAATTCTGATGCCCACCATTGCAAAATG GTAACCTTAAATGATGTTCAAGTTAGAGAGGCCTAAGAGGTAGAGCATGACACCTCACTCTAAAAGCTGACATGTCAAGT TTGTGTGAGAATAAAAAGAATGAGATGTCAACGCGAGAACGCGTGCTTCATGATTTATATATTATAATAGATAGATAGAT TCTAATTAATAACAAACATCACGGCTTATGTTACATGTAAAGTAATTGATTAGTCTCATAACTATTGATCACGGTGAAAT TTCTTAGTTAAGAGAAAAAATCACTCACTCAAACCAGGTATAACATCATGCCTATAATAGCAACAAAATACCACCTTAAT AATGGTGGCTCGATGCTCTTGTTAGGATTTAGGAGTAACAAAGTTCCACACAAAACTCCACAAAACAGAAGCCACCTTCT TTGATTCAACGAGTTAACTCTCAGTATTCAAAAACCTTTTCTTTTTTTCTTTCTTCCTATTTAAACCATACCCTTTGTTT TGATTTTGATCCCTCTTCCAGAATCTAGATCCAGAAGAATCTGCTGAAGAAGATGGATAGTAACGATTGGGTACTCCTTT CTGATGATGGCTCCCTTGATGGTGGTGATGAGAATCAGATTTTCCTGGGAAAATCAAACCCAGAATCAAAAAGTGATTTT GACATGAATTACTTCTACTGCACCTCACCAAAATCAAGGGATTCTTCCACAACCACAACACAACTTCTCCATGATGATCC AATTCTATTATTTGTACCCCATATTGGGAACAAAGTAGAAAACACTGAGGATGATGATCATGTTGGAGACAACTCAGCAG ACACCACCTCTGAGAAAATCAAAGGAGCTGTTGTTGTGGAAGCTGATCAACAAGAAACTGTTGACACTGTTTCTGTTTCA CAGTTTCTCTTGCAGCTGGAAAATAATTTTGCCGACATGAAAATGGATTCTCCAAAGTCCAGTCCTACAGTACTGTTTCC TCCTCCTCTTGATGATGCAGGTGCTATGAAATCTGAGGACAAAGGTGAGGCTATGGAGGTTATGGTCTCTCCTAGAATGA AGGTTGAGAATGAAATGACTACCATGGACTGTGTCAGAGAAGAGGGGGACCACACTGATGGTTTCAATTTCTGGAAGTGG AGCTTGACAGGGGTTGGAGCTATCTGTTCTTTTGGTGTTGCTGCTGCCACAATCTGTGTGCTGGTTTTTGGAAGCAAGCA AAGGAACAAATTCCACCAGAACCATAAGATTCAGTTCCAGATCTACACTGATGACAAGGTCAGCAATTGTCTCAATTTTT TGTTGGGTTTGTTAGAACTCATTTGTTAAACTTGTTTTAGATATGTAGTTAGGTCTATGCTTAATTTAGTACAAGATTGA GATGGAAGAACTAATCATATCATTTAAATGATGTCATTAAAGAAAGGGTGTGGGGGTAAGAAAAGGTATTTGTTTATTTT GCATTAAGTGTGCAAACTCACTATTTTTGTGGATGTTTGGATGCACAACCAAAATCAAAAGGGTAAACAAATAACTTCTT TTAGCTTTTTTGTGTTTGTTGACCATGGTTTTGGCTTCACAGTGATTTTTCTATGTATGTTCAAACATATACTTTATATA GTTTACTTGACTAAGTCCAAATTTCAATGATTATTATTGACTTCCAATTAACTTTTCTTCGAGCTAAATGGACATGAGTA CGAGTCTTGACACAGTGGTAAGCTCATTACCATGTGATTTTGCGATCACGGGTTCAAGTCGTGAAATTAGCCTCTTGCAA AAAGAAATGCAAGGTAGGGTTGGCTACATTAGATTTACAAAGTGGATCTGACTCATCCTTAGGTCTTGCGCATAGCGGGA GCTTAATAACACAAGATTCTCCCTTTTTGGGTTAAAAGGACATGTTTGGATGAGTCTAGTTGATAAAAGCCTGTTCATGT TGCATTAGTTGATATTCAAATACACAAAATCATTCTTAATGAAGTTGCAATATATATACTTTTACCCTTAAATTTGCAAC CAAATATGCACTATTGATCCTTGAATATTGAATGATTGAAATGATCCTCAATTGTGATTGCAGAGGATTAAGCAAGTGGT ACAGCAAGCAACCAAATTGAATAAAGCAATTGCGGCAACAAGGGGTATTCCACTGAGCAGAGCTCACATAACATATGGTG GTTTCTATGAAGCTCTTTGAGGAAATGATTTCGTGCCTTCATGGAACATTTGGATTCCACAACCTATGGCTAGGGACACC ATCTTCTACTGTATCGTCTACCATATGGTTTTGTAAATAAAAATATGATGGATGGTGTATTGTAAATTGAATCCCAGATT AGGGGCTCTTTTATTATTATTAATTTGTCCTTTTGGGTTTGAAGGATTAAAAAAAGTTTGTCTGGTAGTTGCCCCAAGTT ATGGAGCAATTGTTTTTAGTTTGTTTTCTTGGTCATCAAGTTATGGAGCAATTGTTAAATGAAAGGTTATTTTTTATAAA GAAAGAGAGGTGGTGCCGTGAGAATGGTATGGAAAGTAGAAATCTTATAATGTTAGGCATGCTCGACCAAATGCTAAGAG CATCTCAAATGGAGTCCTTATTTTGGGATCTTAAAATAAGATCCGGATCTTATTAGATCTCACCATTGGAGCTATCCTAG GTGGCATGAGATCTTAGTTTTTGCTAAGATCCGTGCCTTAGCTCATGTACTCTCAAATGTGGGATCTTAAATAAAATAAT ATTTTTTCTCTCTCTCCTTCAATACAAAA
CDS sequence (LotjaGi1g1v0643400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATACTACTAATGATTGGGTGCTCCTTTCTGATGATGGCTCCCTTGATGGTGGTGATGAGAATCAGATTTTCCTGGG AAAATCAAACCCAGAATCAAAAAGTGATTTTGACATGAATTACTTCTACTGCACCTCACCAAAATCAAGGGATTCTTCCA CAACACAACTTCTCCATGATGATCCAATTCAATTTGTAGAAAACACTGAGGATGATCATGTTGGAGACAACTCAGACACC ACCTCTGAGAAAATCAAAGCTGTTGTTGTGGAAGCTGATGAACAAGAAACTCTTTCTGTTTCACAGTTTTTCTTGCAGTT AGAAAATAAATTTGCCGACATGAAAATGGATTCTCCAAAATCCAGTCCTAGAGTATTGTTTCCTCCTCCTCTTGATGCAG GTGCCTTGAAATTTGAGGACAAAGGTGAGGCTATGGAGGTTATGGTCTCTCCTAGAATGAAGGTTGAGAATGAAATGACT ACCATGGACTGTGTCAGAGAAGAGGGGGACCACACTGATGGTTTCAATTTCTGGAAGTGGAGCTTGACAGGGGTTGGAGC TATCTGTTCTTTTGGTGTTGCTGCTGCCACAATCTGTGTGCTGGTTTTTGGAAGCAAGCAAAGGAACAAATTCCACCAGA ACCATAAGATTCAGTTCCAGATCTACACTGATGACAAGAGGATTAAGCAAGTGGTACAGCAAGCAACCAAATTGAATAAA GCAATTGCGGCAACAAGGGGTATTCCACTGAGCAGAGCTCACATAACATATGGTGGTTTCTATGAAGCTCTTTGA
Protein sequence (LotjaGi1g1v0643400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTTNDWVLLSDDGSLDGGDENQIFLGKSNPESKSDFDMNYFYCTSPKSRDSSTTQLLHDDPIQFVENTEDDHVGDNSDT TSEKIKAVVVEADEQETLSVSQFFLQLENKFADMKMDSPKSSPRVLFPPPLDAGALKFEDKGEAMEVMVSPRMKVENEMT TMDCVREEGDHTDGFNFWKWSLTGVGAICSFGVAAATICVLVFGSKQRNKFHQNHKIQFQIYTDDKRIKQVVQQATKLNK AIAATRGIPLSRAHITYGGFYEAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 179 | 179 | - | – | |
| PANTHER | 1 | 264 | 264 | 3.5E-78 | – | |
| PANTHER | 1 | 264 | 264 | 3.5E-78 | – | |
| Phobius | 180 | 203 | 24 | - | – | |
| TMHMM | 182 | 204 | 23 | - | – | |
| Phobius | 204 | 264 | 61 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0643400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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