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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0644300 |
| Transcript ID | LotjaGi1g1v0644300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase; TAIR: AT2G19070.1 spermidine hydroxycinnamoyl transferase; Swiss-Prot: sp|O64470|SHT_ARATH Spermidine hydroxycinnamoyl transferase; TrEMBL-Plants: tr|Q2HVM4|Q2HVM4_MEDTR Transferase; Found in the gene: LotjaGi1g1v0644300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120160201..120166411) extracted from Lotus japonicus Gifu genome v1.2.
GGATGCTTGCTATTACAACATGTGTCTCCATCGGAGTTCGTGGGGATAAAATAGCCCAAACAGCCACCGTCACCGCCACC GCCACCGGAGTTCAATTCAAGAAACAGAACAAAAATGGTGAAGATACAGTGTTCATACACCGTGACTCCCTCCGAGACCA AACCAACACCACCACCAACACTCTCTCTTTCCCACTGCGATCAACTCAAACTCCCCAACCACGGTTCTCAAATTTACCTC TACACTCCCTCCACCACCACCACTGAACCACCTCCACCACTCTCTATTTCAATCCACACCCTCAGAACCTCCCTCAGCAA AGCACTCACCCACTACTACCCCTTCGCCGGCCGATTACACTGGATCGAAGCTGGTCGCATGGAACTCCTCTGCAACTCCA AGGGAGTTCACCTCCTAGGAGCAACCTCCGATGTCCCTTTCGATGATTTTGGAGATTTAGCCGATACCCATGTTGCAGAA CAGTTGGCGCCGAGGGTTGACTACAGTGTCCCGATTGAGGAAGTGCCATTGCTGGTTGTACAGTTAACCTGGTTCCCTTG TGGTTCCATCACGTTGGGACTTACCCTTTGTCGTGTCTTGGTTGATGGAACTTCTCTTGGCAGATTCATGAGCTTCTGGG CTAAACTGGCTAAGGTAGAGTCATTAGATTTGAGTTTGTTGCCATTTCTTGATCGAACTGTGTTGGATTCATGTAGGCTT AATTTGTCACCTCGTTTTGAACACCCTGAGTTTTCTCCACCACCCATTTGGGAAGGTAGCTCCAATGTTACAACAACATC ACTTTATGCCACTGCTGTTTTCAAATTAACTAGAGTCCAAGCTGGGAAACTGAAGAAGAAAGCCAATAGTAACAACAATG TGCGAGGTGGTTATACTAGTTTTGAGGTTATGAGTGGTCATTTGTGGAGGTGTGTTTGCAAGGTGAGGTATGCAGGGAAT GGGAACCAGCCAACAAGGCTAACAACATTGGTCAATTGTAGGAACCGGTTGAGTCCACCTCTTCCGGATGGTTACTTCGG GAACGCGACGTTTCCTGCGGTGACACAGACTTGTTCCTTTGTTGAGATTATGCAGAGTCCTGTGGGTTATGCTGCTGGGA AAATCAGGGGAGCGGTTCACAGGATGAGTGATGGGTATGTGAGATCTGCTCTTGACTATTTAGCGGATCAAAAGGACATG AATTTGGTGAGGGACAGGCTTTACAACTCTGCTGGACAAAACCCGAATTTATATGTGGTTGGTTGGGCCAATTTTCCATT TTATGAAACGGATTTTGGGTGGGGGAAACCTGTTTGCTTGCTTCCAGGGAGCATTGGTTCTGATGGTAAGGCTTTCATTC TCAATGATGTGAGTGGGGATGGCTTTGTTGTGGCTGTTTGTTTGCAACCTTCCCATGTTGATGCTCTCAAGAAGCTGTTT TATGAGGATATTGAACCTGCTGCTACTTCCAAATTGTGATGAGACTCAAGCTTGGATTTTGCTGCTGCAGCTTCTATCAT ATATAGGTTCAATACCTGGTTGGGGTTGGTCGATTTAGTAACACGCGTGAAGGTGAGATATCAAACTCGGAGCAGTTTAT TGTTTTGATTATCTATGTTGTTTGTAATTAATCAAATACTAGATTGGAAAGTAACTTCTTGACATCCAAATTCCGTCTCC AGGTTAGAGAGATTGGAACAAAAGAGATATAAGGTAGAGATAGGATGATTGATGTGGTGGAAAAGGAATGGAAGAAAAAA CTGGTGTCAATTTATAAAAGATGTACTAGACTTAGTCCTGTGTGATTCACAAATGTATCAATCTTATGTAAAAAATTTAA GCAAAACATTATTTTTATTGTCTAATAATAACATCATATAGAAACATTTTCAGTACTTGTCCTCCTAATTTGTATGTTTG GTATATAAATTTTGAACCTTAATAGGTGACTTTGGTTAGGACTACTTGTCCTTGAATGACGAATGATCCTTAAATGGCGA ATGTTCCTCTATGTTGGTATCCTTCTTTGTGTATTCAATGCAGCAGCACTGGGCACCAGAGGTGTGTACTGCAGATACTC CGACGCAACGAGTGTTTACTTCAGAGATGTCTCTCGTTTGTATATTTATACTCAAGGTTGTTATAAACTTGGTGAGAATC ATGCAAATAAGAAATATAATCATTTAACAGATATGTATCGCACACTACACTACAACAAATTTGAGCTTTCGAGAGAGTTC CAAGCAACAGCCAAAATCCTAAGGCTCTTGCTTGCATCAATGGAGCTGGAGCCTTCACAAACACCAGAAATGCTAGGTCC AAGATGTTTTCGCCGGCGAAGCTCCCGATCTGGAGATCACCTTGCGTCACGATTCTGTTACGAATCTATTTCTTTAAATT ACTGCAATTGCTTTAATCATCACTTGTTTTACTCTGTTAGGGTTCCGACACAAATCCGGCGAGGAGGGCTGATAGGTTCA AGCAGGTTTATTCAAGAAGAAGGGCTCAGGGGTAAATATTAGTTAGTAAGGGGACTTAATTGTAATAAGCTGTTAGGTTG TTAGCTGACAGCTGGCTACAGCTGGAGCAGTTATAGTTAGTAACAGTTGTTAGTTACAACTGAGTAGCATAAATAGTTAG ATTACTTGTTGAGGAAGGCATTGAAGTTAGAGGTTCATTTATGATTGAGGAATCAGAGAGAGATCGAGGGATCTCTAGGT TGAAACCCTAACCTTGTGTTCTTTCCCAATTTCCCAGTTTTCCCCTAATTCTCTGTAAATCCCTAGATTCCCAGTTATAG CTCTATTGAGCAATTGCATTGTAATCACTTTTCAGTTCAATAACAGTCCCTGAATTTACCAGTGTTATCAAGGGCTTTGG AAACTGAGATGCTGGTTATGGTTCAGATTCTCATGGAAGCCCCTAATTGCCTTTTTCTTTCTCTCATTGGAATTTGACAT GTTCAAGATCATGTTCATGTTTAGCTTCCAATGAGTATCTGGGTTGGTAATCTAGAATTTGAGGTGTGTGTGTGTCTGTG AATTGCTCCGAGGAGTTATGAATTGTGTGTATTTGGCCCAGGTCTGTTTTTTTTCTTTTTCTTTCTCCATGTTCTTATCA ATTTTATTATTTTCATACCTTGATTTTGTTGACTAGTTCTGGTATATATTCACTTACATCTTTTGTTTCATTGAATTAGT ATTGTCAAGCTGATTAGGTTTATTGTGAGATCTCTTAGGTTGATGGCCTTATTCATCTCCTGGAAAGACCAGGTACTGGG CCAATCACCCTTGGAAACCCATGTTAGATTTAAGGCTTGTATTCGTGTATCTTTGCTTTTTTGAATTGTGAGTATATCCT TAGGTTGCTTTTTTACATAGTCTTCTAAAACAACTCACTTATTCAATGAATCTTCTACGGTATTAATTTGAAGGCAGTCC TATTCTTGTTAATTTTCTGTGCTCGTTCAGCCTCAATATTTGTGTTCTCTCCAAGTGTGTGTGTGAGAGAGGGGAATGAT TGGCTTTTTGTTACAGTAACATTTATGAGTGTGCTTGAGCTGAAGGAAAAAAAGGAAAGGATTTTGTGAGTTTCTTCACT CACTTAAATAATTTCAGTACTTGCAGTAACTGATTTGACATCATGAATTAGATTAGTGCCATAAAAATTGCTTTACTTAA TACTTGCTTGAGTAACTTACTTCCTTTGACAAAACATGTGAAATACAAAAGAAAAAAGAATGATAGACATGAATGCCATT TGTTTCCTTCCCTTGCACACTGCTTCTACATATTAAACATATTAAGCTTAAGTAGCAACAAGGCAACAATGCTTATTTAT GTGATTAGTGAAAGTTTTGTTTTACTAATTTCACCACCCATCATCTGTTTTTAGTTAACAGAGATATTGTCATCATTTTC ATAGTGAATGGTCTTAATGCTTTTGAGGATTCCCCATGTAGTAGGTTTTGCTTATTCATGGAAGTTTGGCACTGTACCCT GTCCCATTGACTCTACAAGAGTTATTTTCCAAAAAAAGTCACAATTGACTTTTGTTAATTATTATAATGTCATTAATAAC TATTTAATGCAATATTAATACATTAATTATTTCAAAAATATAGAATTATTTAATATTTAAATTGCTAAAAATTAGTAAAT ATAAATATGACATCATCTACCTACTAATTATAGTATGAGAGAAAACTTATGAAGAAAAACATAGAATGAGAAGGTGACAC TTGAAGTTGTCACTTTTTTGTTTCGAAAATAGTATAGGATTCAATGTGACCAAAACGTTATTTAACCGTCATTGATGATA GATGGGCTCCAAAGATCAAGTGTTGGTGTTCATCCATGTGAAGTATGGATATGATGACGCATGCATATAAAACTGCAGCT TTAAGTTTGTGCCCTTTCATCATCATTATCATCATCTCATGATCTCATCATCATTATCTTGTCCAATAAATCACGTGTCT TAGAAAGAAAAAAACAAAATCAACACTCAACTTCAACAGATATAGTTGCCAGCTAAGTTCCTCAAGTCATAGAGCCACCG ATCGAGTTGTGTCAAGAAAAACAGAGGAAAAATGGTGAAGATCCAGTGTTCATACACCATTATCCCCTATGAAACCACAC CAACACCAACACTATCTCTTTCCCACTGTGATCAACTCAAACTCCCCAACCATGGTTCTCAACTTTTCCTCTATACTCCC AATGATTCTCCACCACTCTTCAATTCAGTTCACACCCTCAGAACCTCCCTCAGCAAAGTACTCACCCTCTTCTACCCTTT TGCCGGTCGATTGTGCTGGACTCATGGTGGCCGCTTTGAACTCCTCTGCAATGCCAAGGGAGCACAACTTCAAGGAGCAA CCTCTGATGTCCCCTTGAACGATTTTGGAGATTTAGCTGACACCCATGTCGCGGAACAACTGGTACCGAGGATTGACTAC AGTGTCCCAATTGAGGAGGTTCCTTTACTTGCGGCGCAGGTAACCAGGTTCTCTTGTGGTGCCATCACTTTAGGCCTTGC CTTTTGTCGTGCCTCGCTTGATGGAACCTCTCATGGGGGATTCATGACCACCTGGGCCAAATTAGCCAGAGGAGAGACTT TGGATGATTCAAGTTTGATGCCGTTTCTTGATCGAACTGTGTTAGATTCACGAAGCCTTCATTTGCCACCGCGTTTTGAA CACCCTGAGTTTTCTCCACCACCCATTTGGGAAGGTAGCTCCAAGGTTACAACATCACTTTATGCCACTGCTGTTTTCAA ATTAACAAGAGCACAAGTTGAGAAACTGAAGAAGAAAGCCAATAGCAACAACAATGTGCGAGGTGGTTATACTAGTTTTG AGGTTATGAGTGGTCACTTGTGGAGGTGTGTTTGCAAGGTGAGGTATGCAGGGAATGGGAACCAGCCAACAAGGCTAACA ACATTGGTCAATTGTAGAAACCGGTTGAGTCCACCTCTTCCAAATGGTTACTTCGGGAACGCAACGTTTCCTACGGTGAC ACAAACTTGTTCCTTTGATGAGGTTATGCAGAGTCCTCTGAGTTATGCTGTTGGCAAAGTCAGGGGAGCGATTCAGAGGA TGGATGATGAGTATGTGAGATCTGCTCTTGACTATTTGGCGGATCAGAAGGATATGAATTTGTTTAGGGACAAGTTTTAC AACTCTGCTGGACAAAACCCAAATTTGTATGTGGTGTGTTGGACCAATTTTCCATTTTATGGAACTGATTTTGGGTGGGA AAAACCTGTGTGCTTGCTTCCAGGGAGCATTGGTTCTGATGGTAAGGCTTTCATTCTCAATGATGCAAGTGGGGATGGAT TTGTTCTGGCTATTTCTTTGCAACTTTCCCATGTTGATACTCTCAAGAAGCTGTTTTATGAGGATATAGAGTCTGCTGCT ACTTCCAAATTGTGATGATATGAGACTTGTCAGCCTTTGATTTTGGTGCTGCTGCTTCTTAATAAAGCTTCAGTACCTGG TTGATTCATGAGATATGAAACTTAGAGCAGTTTATAGCTTTGATTCTCTTTGTTAATTGCTTGGAATTAATTATCCTAGA TTGGAAAATAATTTCTTCACATCCAAATCCATCTCCGCCATAGAGAGATATGAAGAGAAGAGATGTAGCCATGTCGGTGA AGAGATTCATGTAGATGAGAGATATGTAGTTTCTTATGCAAAAAAAAAAAA
CDS sequence (LotjaGi1g1v0644300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGATACAGTGTTCATACACCGTGACTCCCTCCGAGACCAAACCAACACCACCACCAACACTCTCTCTTTCCCA CTGCGATCAACTCAAACTCCCCAACCACGGTTCTCAAATTTACCTCTACACTCCCTCCACCACCACCACTGAACCACCTC CACCACTCTCTATTTCAATCCACACCCTCAGAACCTCCCTCAGCAAAGCACTCACCCACTACTACCCCTTCGCCGGCCGA TTACACTGGATCGAAGCTGGTCGCATGGAACTCCTCTGCAACTCCAAGGGAGTTCACCTCCTAGGAGCAACCTCCGATGT CCCTTTCGATGATTTTGGAGATTTAGCCGATACCCATGTTGCAGAACAGTTGGCGCCGAGGGTTGACTACAGTGTCCCGA TTGAGGAAGTGCCATTGCTGGTTGTACAGTTAACCTGGTTCCCTTGTGGTTCCATCACGTTGGGACTTACCCTTTGTCGT GTCTTGGTTGATGGAACTTCTCTTGGCAGATTCATGAGCTTCTGGGCTAAACTGGCTAAGGTAGAGTCATTAGATTTGAG TTTGTTGCCATTTCTTGATCGAACTGTGTTGGATTCATGTAGGCTTAATTTGTCACCTCGTTTTGAACACCCTGAGTTTT CTCCACCACCCATTTGGGAAGGTAGCTCCAAGGTTACAACATCACTTTATGCCACTGCTGTTTTCAAATTAACAAGAGCA CAAGTTGAGAAACTGAAGAAGAAAGCCAATAGCAACAACAATGTGCGAGGTGGTTATACTAGTTTTGAGGTTATGAGTGG TCACTTGTGGAGGTGTGTTTGCAAGGTGAGGTATGCAGGGAATGGGAACCAGCCAACAAGGCTAACAACATTGGTCAATT GTAGAAACCGGTTGAGTCCACCTCTTCCAAATGGTTACTTCGGGAACGCAACGTTTCCTACGGTGACACAAACTTGTTCC TTTGATGAGGTTATGCAGAGTCCTCTGAGTTATGCTGTTGGCAAAGTCAGGGGAGCGATTCAGAGGATGGATGATGAGTA TGTGAGATCTGCTCTTGACTATTTGGCGGATCAGAAGGATATGAATTTGTTTAGGGACAAGTTTTACAACTCTGCTGGAC AAAACCCAAATTTGTATGTGGTGTGTTGGACCAATTTTCCATTTTATGGAACTGATTTTGGGTGGGAAAAACCTGTGTGC TTGCTTCCAGGGAGCATTGGTTCTGATGGTAAGGCTTTCATTCTCAATGATGCAAGTGGGGATGGATTTGTTCTGGCTAT TTCTTTGCAACTTTCCCATGTTGATACTCTCAAGAAGCTGTTTTATGAGGATATAGAGTCTGCTGCTACTTCCAAATTGT GA
Protein sequence (LotjaGi1g1v0644300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKIQCSYTVTPSETKPTPPPTLSLSHCDQLKLPNHGSQIYLYTPSTTTTEPPPPLSISIHTLRTSLSKALTHYYPFAGR LHWIEAGRMELLCNSKGVHLLGATSDVPFDDFGDLADTHVAEQLAPRVDYSVPIEEVPLLVVQLTWFPCGSITLGLTLCR VLVDGTSLGRFMSFWAKLAKVESLDLSLLPFLDRTVLDSCRLNLSPRFEHPEFSPPPIWEGSSKVTTSLYATAVFKLTRA QVEKLKKKANSNNNVRGGYTSFEVMSGHLWRCVCKVRYAGNGNQPTRLTTLVNCRNRLSPPLPNGYFGNATFPTVTQTCS FDEVMQSPLSYAVGKVRGAIQRMDDEYVRSALDYLADQKDMNLFRDKFYNSAGQNPNLYVVCWTNFPFYGTDFGWEKPVC LLPGSIGSDGKAFILNDASGDGFVLAISLQLSHVDTLKKLFYEDIESAATSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 442 | 442 | 6.3E-90 | ||
| Gene3D | 1 | 215 | 215 | 2.2E-54 | ||
| PANTHER | 3 | 444 | 442 | 7.1E-200 | – | |
| PANTHER | 3 | 444 | 442 | 7.1E-200 | – | |
| Gene3D | 221 | 444 | 224 | 4.5E-71 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0644300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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