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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0644400 |
| Transcript ID | LotjaGi1g1v0644400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDSL esterase/lipase; TAIR: AT1G71250.1 GDSL-like Lipase/Acylhydrolase superfamily protein; Swiss-Prot: sp|Q9FVV1|GDL28_ARATH GDSL esterase/lipase At1g71250; TrEMBL-Plants: tr|A0A0R0ICE4|A0A0R0ICE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0644400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120168954..120171076) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGACCAAGCAAATTCACGAGAAAAGTGAACTCCACTTCCAACTTCAACCTCTATATATACATGGCATCCAACTCCAA CCTTCACCATAATATATAGGTTTACTTCAATATTTTTATAATTCACCAACTGATAGACATGGGTAGATTAAAGTATGTGA GGATTCCAACAATGATTCTTTCATTGCTACTTTGCTTGAATGAGATGGTAAAAGTGAACTCACAGTCATCCAACGTTCCA GCTTTGTTTGTTTTTGGAGATTCATCAGTTGATGTTGGCAACAATAACTTATTAAACTCTATGGCAAAGGCAAATTTCTT TCCTTATGGTATCGACTTCAACAATGGTTCAACTGGGCGTTTTTCTAATGGAAAATCTCTCATTGACTTCATTGGTAAAT GATCCTTTTTTACTAGTACCATGACTATATATCAATATGGACTTCTTTTTTTCTCTTTAATTTGTGTAGTTGTAATTATG TAATATGTTGGATTGCATGCAACGTGGATCTTCACTTTCTCTAAATTCATAATTTTTATCCCTACAGGAGAGTTTCTGGA TGTCCCTTCTCCTCCACCTTTTGCATCTATCTCCTCTGTTGGATCTGGAATACTCAATGGAGTCAATTTTGCATCATCCT CTGGTGGCATTCTTGATGAATCTGGGAGACACTATGTACTCTACACACTTGTCTCAGTTATTCTTAATTTTTTTTGAGTT TTCGCCAAATAAACAAAAGAACTTTTATGAAATATAGACATAATATCACTATTGAAGTAGAGCCTGTTCTGAATGCTTCT CCATTACACAAGTTCTCTTGAAGAGAATAAAATGTTGCTTCCCAACTAGTGCACCAATAGCTAATTAGATCCTATTTTTA TACTTTTTTTACTTTAATAAAAGAGCACATTATTATTTTTCCAATAAATTTGTAATCTTTTATTTATTTATGATATCTAA AAGCATAAGTATTATGATGCAGGGTGAACGATATAGCTTGAGCCATCAAATCTTGAACTTTAATGACATATTGAATAAGT ACAAAACAATGATGAATGCAAGTGCATTAAGTCAGTACTTAGCCAAGGCTATAACAATTATGGTCGTTGGAAACAATGAC TACATCAACAACTATCTCATGCCGGAATTGTACACCACAAGTCTCAATTATACGACCCAAGAATTTGGCAACCTTCTTGT TAACAACTATATGCAAAATATTATGGTAAATTTTTCATTTCTTATCTTTTATATGGTGCATATAAATCTCAATTCTACCG CATATTTTGTATTTCCTTCACCTTCTCCTTATTTTAAGAGTTTGAAGTTGCATTTGAATTTACTATATATCAAATTGATT TCAAGTATGCTCTATTGCAGACACTATATAACTCCGGATTAAGGAAGTTCTTCTTAGCCGGAATTGGACCACTTGGTTGC ACTCCTAGTCAAAGAGCTAGGGGATTTGCCCCACCAGGAAGCTGTGTCGATTCGGTAAATCAGATGGTGGGACCATTCAA TGAAGGGCTTAAATCAACAGTAGACCAATTGAACAAAAATCATTCAGATGCCATATTTGTATATGGTAACTCTTTTCGTG TACTTGGGGATATCCTAATCAACCCTGCTGCATACTGTAAGATTTACTGATCCATTCTCAATCAAATCACGCAATGTATA AAAATGGAGATGATGAGTTAAAAAAATGGTAATTTTTTCCTTTTGCAGCGCTTACAATTGTTGATAGAGCCTGTTGTGGA ATTGGAATATATCGTGGACAAATATCATGCCTCCCTCTCCAATTTCCATGTCTACTCAGAAACCAATATGTCTTTTGGGA TGCCTTCCACCCAACAGAATCAGTAGTACATGTTCTTGCTTGGAGAGCTCATAATGATCCACCCGATGATTCATATCCCA TTAATATCAAGCAAATGGCCCTCCTTTAATGTACTATTTAATGTATTATCGTTTCATTTATGAAATAAATACATCAAAGT TAAAGTAAACCTAGTTATGTAAGTTGTGATAACGTATTAAATCATTATATATATAGTAACGAATATAAATGTTTCTTTTA TAAAAATAATTATTTTAAGAATGTATGTATATTTAAATTTAGG
CDS sequence (LotjaGi1g1v0644400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAGATTAAAGTATGTGAGGATTCCAACAATGATTCTTTCATTGCTACTTTGCTTGAATGAGATGGTAAAAGTGAA CTCACAGTCATCCAACGTTCCAGCTTTGTTTGTTTTTGGAGATTCATCAGTTGATGTTGGCAACAATAACTTATTAAACT CTATGGCAAAGGCAAATTTCTTTCCTTATGGTATCGACTTCAACAATGGTTCAACTGGGCGTTTTTCTAATGGAAAATCT CTCATTGACTTCATTGGAGAGTTTCTGGATGTCCCTTCTCCTCCACCTTTTGCATCTATCTCCTCTGTTGGATCTGGAAT ACTCAATGGAGTCAATTTTGCATCATCCTCTGGTGGCATTCTTGATGAATCTGGGAGACACTATGGTGAACGATATAGCT TGAGCCATCAAATCTTGAACTTTAATGACATATTGAATAAGTACAAAACAATGATGAATGCAAGTGCATTAAGTCAGTAC TTAGCCAAGGCTATAACAATTATGGTCGTTGGAAACAATGACTACATCAACAACTATCTCATGCCGGAATTGTACACCAC AAGTCTCAATTATACGACCCAAGAATTTGGCAACCTTCTTGTTAACAACTATATGCAAAATATTATGACACTATATAACT CCGGATTAAGGAAGTTCTTCTTAGCCGGAATTGGACCACTTGGTTGCACTCCTAGTCAAAGAGCTAGGGGATTTGCCCCA CCAGGAAGCTGTGTCGATTCGGTAAATCAGATGGTGGGACCATTCAATGAAGGGCTTAAATCAACAGTAGACCAATTGAA CAAAAATCATTCAGATGCCATATTTGTATATGGTAACTCTTTTCGTGTACTTGGGGATATCCTAATCAACCCTGCTGCAT ACTCGCTTACAATTGTTGATAGAGCCTGTTGTGGAATTGGAATATATCGTGGACAAATATCATGCCTCCCTCTCCAATTT CCATGTCTACTCAGAAACCAATATGTCTTTTGGGATGCCTTCCACCCAACAGAATCAGTAGTACATGTTCTTGCTTGGAG AGCTCATAATGATCCACCCGATGATTCATATCCCATTAATATCAAGCAAATGGCCCTCCTTTAA
Protein sequence (LotjaGi1g1v0644400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRLKYVRIPTMILSLLLCLNEMVKVNSQSSNVPALFVFGDSSVDVGNNNLLNSMAKANFFPYGIDFNNGSTGRFSNGKS LIDFIGEFLDVPSPPPFASISSVGSGILNGVNFASSSGGILDESGRHYGERYSLSHQILNFNDILNKYKTMMNASALSQY LAKAITIMVVGNNDYINNYLMPELYTTSLNYTTQEFGNLLVNNYMQNIMTLYNSGLRKFFLAGIGPLGCTPSQRARGFAP PGSCVDSVNQMVGPFNEGLKSTVDQLNKNHSDAIFVYGNSFRVLGDILINPAAYSLTIVDRACCGIGIYRGQISCLPLQF PCLLRNQYVFWDAFHPTESVVHVLAWRAHNDPPDDSYPINIKQMALL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 12 | 12 | - | – | |
| PANTHER | 13 | 366 | 354 | 4.7E-147 | – | |
| PANTHER | 13 | 366 | 354 | 4.7E-147 | – | |
| Phobius | 13 | 20 | 8 | - | – | |
| Gene3D | 21 | 352 | 332 | 2.2E-35 | ||
| Phobius | 21 | 28 | 8 | - | – | |
| Phobius | 29 | 367 | 339 | - | – | |
| CDD | 34 | 345 | 312 | 1.53574E-113 | ||
| Pfam | 36 | 343 | 308 | 1.6E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi1g1v0644400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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