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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0644800 |
| Transcript ID | LotjaGi1g1v0644800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-phosphoinositide-dependent protein kinase-1; TAIR: AT3G10572.1 3-phosphoinositide-dependent protein kinase-1; Swiss-Prot: sp|Q8W4B2|APEM9_ARATH Protein APEM9; TrEMBL-Plants: tr|A0A151T2W4|A0A151T2W4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0644800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120211311..120216087) extracted from Lotus japonicus Gifu genome v1.2.
CATTGACCCAGTGCCTCGACCAAGTCGATCACCAATCCGAGTATGATAACACCGTACTAGTCTGTATACAAGCATATCAA TAATCCCACAACCCAATCGTAGCATAAAAGTTTGGGGAAATTGAACCAAACCAACCTCCCTTGAACAGAACTTAACATCG CACACACTACCCCTCTTATTTTGAATATGACACTCGATACCCTTATTTTACTAAACAGTTTACACACAGGAGGTAAAGAA ATCTGGTGGGATCGAGGGACGGAGATGATGATGACGGTGCTCCATGGCAGGTTCCGATCTGGTACAGGTTGCGTTGCCTA ATATCCAGACGCCGCCACCTCCTTTCCTCCGCTGCTGCTGCTGCAACCCACTATGACCGACTCGGACTCGCTTGCTGCGA TATGGAAAGAAATCGAGGTTTCAGAGAGGTAAACTTTGCGATTGCCAAATTGAAATTCACACAGAAACTTGTTACCGCTT CGCTTCTTTCTTATCTTATTTATTGATTCGAAAAAACACAACATGGATTCATTTTTATGTGGTGTTGTTGTTGTTGTTGT TTCAGTTACCTTGTTTGCTCCATGTACGAAGAAGCAGCATCCTTAGCTTCCTCAATTTTGAAACGCTTGTGTGATCCTAG ACAAGACATTGCAACTCAAGATATGTTGGAATCAACTGCTATGGTGCTGGTTCAGGCTCTCAACCAACTTGGCAGGTAGG TCAATTACCTTTTTCTTTTCTTTTATTTTTTATTTTCCCCCAATTTGAAAATACATAATAGGATGCAGTTGATTATTACT ACTATATATCAGACTAATGATTATGATGAATTTAATTGCTATGGACAAATATTTAAAATGGAACAAATTTGACTGATATG ATTGGATGCACGTGTAAAACTTTTTATACTGTCTGTCAGTGCATATAAATTAAATCTTAATTATGAATGTGTGGTGTGCT GCAGGACGCCGGAAATTCTTAATCAACTCAAACTGTATTTCATTTCAGTAAAAGCCTTTCCAGCGCGAGTTCTTCTTACC GGGTATGATTATTGTTGCTTAGCTTTCACTCTGTCTGTGTCTGCTAACTTTGATATCCTTAACATCTTTAGACTAATAAC AAAGATGTTATTATATCATCTGTGATTGTCATTTTGCTTGTTTCTTCATGATTCAAACATTTTGGGCTTGCCTGTCTGAG TGTAGGATTTGCTTGCACGCAGCATCCTGGCTGTAGTGTCTGACCTGGGTTAAACTCTTTTTTATGTTATCCATGTAATT ATGTCTGCGAACATGGTATTGGAAAGTGACATTATATTCGGATTCAGGAGAGTCGTGTTCACTATTTTCTCCTTTGGTTC AGAGTTTGTTTTCAAATAGCAGAAGGTTCTGCTTCTGGCGTTCGAGAATTTCTTGAGGAGTTTCTTAATGGATGGAGTCT TGTGGATGCACAATATAGAGCTGTCATTGCAGAATCAAATGTAGATCATCAAAGAAGATATGAAACGCAATATGTTCTTG GAATTGAGGAATATTTGGAAATTGTTGAGGTCTATGTCATTACACTTCTTGCAACAGTTCTAAAAGATGTAGACCTCGCA ATTTCATGGATAGAGAATGCTTCATTGCCTGAGGAAAATCGACAGGTAAGGGTGATGTCTGCAAGTTAAGTTTTCATGTA ATTCTATAAATCAAGATTAAAGACTTTTTAATTAGGCATCCAAACTGGAAATGTGAAAGTTCACAGTGGCATCTTGGTTT GAAATGCTCAATTTACCAGCTGACATGCACTGTGTGAATAGTGTACTAACTGGAATTTCTCTTTATGATACATGTAACTT GAGCAGGTGATGTGGTTGAGTTGTGACTAAACATTAAGTTAACATTATGAATATTCTTGAAGCTGATCACAGCATACATG CTTTGATTTTATATGAATTGCAAGAACTGAATTAAGGAATTTTTAAAAAACTCTCGTTTTTGTTGCTGGCTTGCTGTTGT TGTTCCTTGTCCATATGTCCGTGGAAGGTGGTAAATTGGGTTGAGTTAACTGAACACAAGATTATTTTTGAAAGATGTTA TTCTAGGGAAACTAACTGATTCTGACCCTATAACTCATTTTATCTGTATAATTTTTTTACTTAATTCTTATTAGCCTCCC CGGAATATGTCTATAATATCTTACTTACCTTACCTCCGTCAGCCTGAGAGGAATGTTGTGCATATTCATCTTCTTTGAGT GATATCTCTTATATACTTGTGCACGTTTATCTTTCTCTTTTTAGTATTGTTTCTTTGAAATAAAATGGTAGAGTGCAATT TAAGAAATTTAATTATCTATCTTGCTCAAAGGGAATCAGCTGCAAGCTTTTATCAGTATATTGGATTTATTAGCCTATGT CTAAGCTGAGACTATTTTTGAGTTAGCTGTCTTTCTTTTGGTTCTATTTATTTGAGGATAAACTGCTTATTGTGTGCTTC CAATATAATTATCATGGTAATAAGTATTGTGTTGTGGGTTTGATATGTAAGTATGTACAATGAGGAATATATTTAGAGAT TCTAACAGGTAAGGAGACATTTAACCAAAATTCAAAGTGTGGACTTTTTTAAAGAAAACTGTAGTGTTTATTATTTATTG GTGTAGAGAGGTTGTTTCATTACTGGAAATTGGTGTTGTTAGATTAATCACTGTAAATATGATGGCCATTCTCCGCTTCA TAAAACATACACTAATCTCTACACTGTAATTGCCACACTATCTGGATCTTAACTGCAAAATATTGCCTTTTTGTCCTTGT GTGGTTTTCCCATTCATTTACTAACTATTGGTATGCCACTGTATTTATAGGGACTTCTGAGAAGGTTACACTCTTTGCAT TCTCTTAAAAGTACCACTTTGTCTCAAATTTCCTCTCAGCAATCACCTACAAATAACAATGAAGCTTATTCTTTGAAAGA ACTAGATGCACGTGAAGGATCGCCTAAAGCCTTGAAAGGCAAACATGCAGACAACAAAACACATCGGTCCCTAGGTGTTT CAAAACTATCTGAACGAGTAGAAACATGTTTCTGGTGCTTCCGTTCTATCAATTTGAAGTTTGGTACTGCTAAGTTTGTC ATATCTAGTGGGAAGATTATGCTTGGTTGCTTAATCTTGTTCTTCTATTACGTTTTCAGAAAGAAGCAAGCTACTTTAAA AAGGTAATAACTTTAATCTTGTTCTTCGTTGTCCATATCCCCTCACCCTTGAGGATGTGATCATGAATGGTAGTGAAAAG TAGTTTTAGTTTAAAATAATCTTCTTCTTTCCCACTGTTTCTGGTTGTTGTTCTTTTCTGGGTGGAGGTTACCAGGGCTT TATGAGTATCTATGAAACTATTTAACAGGTTATGTTGTGATTTGTGAACCCTTTTTTCCACAGCCATGTCATTCCAAATG GGTTGACCTATTTGGCACTGGTTTTGTGGCATAAGTTTTTTATTTCTTTTAGTTCTAGGCAGCCGCCTCATTGCAAGGTT GGCCTTATATGTGATTTCTTTTACTTTTGAAGAACACATTCAACTTCAGTTTTACTTGTTATTGTAATATATGCACTGAG GCTTATATTTTTTGCTAAATAGCATTGAGGTTTTTAAGACGAATAATGATATATCCTCCTATAAATCCTCTTACAAATTC TCCTATAACCATATAAAGAACATATTAAATCAAAAGTTAATGCATTTGGTATATTGGAAGTATAAAAAAAAAAGTAATTC CCTATTTAGTATGTAAGAGGATGAAGTAGGAGGCTATAACATTACTCTTTTAAGATATATGTTATCATCATAAGCAGAAC TATTTCACTTTTTGCGGTGTCTCATCTCATGGTGAAGAAGTGAGCAGATTTTATTTATTCATAATCATAGGGGCTTTTGA GGTGTCCTTGTTCACCCAAGGGGTCTGTTTTACTGTATAATATATTAATAATTTTCTTTCCGTGCTTTCTTTGCTGTAAC TAAACCCTTTTGAATGGATTTGGGAGCTGAATGAGTATTCATGGTTTAGGATTGTAACAAGACAAATGATCGCCATGAAG AGGGCTTTGGTCGATTTTTGGCAGCTTGCATTTTCGTATCAAGTTAATCCTCTGGCAGCTGTCGAACCACTCGCTGCTGC GGCACGTCAAGCTCAGTGATGTGAATTGTTGATCAACTACAAGTCCTTCATAAGTAATCCTCTGTGTACCTTCTTGACTA GCCTGACAGTTTCAGAAAGGCAACATTATATTGTTTGAAGATGCGCTTTGCAATGCTGATACTAATGCCTCAAGATTTAT ATGCTCTGAATTCATGTGATGTATGCTATTCATGTATGCCATTCTCTGTACTAGGATAGGAATGCTTGAGATAAACACAC TCAAAAAATTGCAAAATGGAAACCACATATCCACTGCAGAAAATGTTATCTCAGTGCGATATTGTGCTATGAATAGAAAA GCTATCAATTCGAATGGTTTCTTTCACAAGGTGCTGAAAAGTTGTGTTTTGAACTTCAGATCTATAATGGTTTAAGTTTG AGCTTTTTACCATATGTTATTTACACCTGCGTGTGCCATATATGAGGTAAAAATGTTTTTGCTGTTCAATTTAAGCTAGG TAGCCTAGTGAAGCTCTCCAAATGGAAATGGCTATAGTTTTGGGGATATAAGATCATGGAAAATATTGGGACAACAATTT TACCTTGAGTATTCTTATATAATTATTCCAACAAATTATCCTCCTACTGTAAAGAAA
CDS sequence (LotjaGi1g1v0644800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCGACTCGGACTCGCTTGCTGCGATATGGAAAGAAATCGAGGTTTCAGAGAGTTACCTTGTTTGCTCCATGTACGA AGAAGCAGCATCCTTAGCTTCCTCAATTTTGAAACGCTTGTGTGATCCTAGACAAGACATTGCAACTCAAGATATGTTGG AATCAACTGCTATGGTGCTGGTTCAGGCTCTCAACCAACTTGGCAGGACGCCGGAAATTCTTAATCAACTCAAACTGTAT TTCATTTCAGTAAAAGCCTTTCCAGCGCGAGTTCTTCTTACCGGAGTTTGTTTTCAAATAGCAGAAGGTTCTGCTTCTGG CGTTCGAGAATTTCTTGAGGAGTTTCTTAATGGATGGAGTCTTGTGGATGCACAATATAGAGCTGTCATTGCAGAATCAA ATGTAGATCATCAAAGAAGATATGAAACGCAATATGTTCTTGGAATTGAGGAATATTTGGAAATTGTTGAGGTCTATGTC ATTACACTTCTTGCAACAGTTCTAAAAGATGTAGACCTCGCAATTTCATGGATAGAGAATGCTTCATTGCCTGAGGAAAA TCGACAGGGACTTCTGAGAAGGTTACACTCTTTGCATTCTCTTAAAAGTACCACTTTGTCTCAAATTTCCTCTCAGCAAT CACCTACAAATAACAATGAAGCTTATTCTTTGAAAGAACTAGATGCACGTGAAGGATCGCCTAAAGCCTTGAAAGGCAAA CATGCAGACAACAAAACACATCGGTCCCTAGGTGTTTCAAAACTATCTGAACGAGTAGAAACATGTTTCTGGTGCTTCCG TTCTATCAATTTGAAGTTTGGTACTGCTAAGTTTGTCATATCTAGTGGGAAGATTATGCTTGGTTGCTTAATCTTGTTCT TCTATTACGTTTTCAGAAAGAAGCAAGCTACTTTAAAAAGGATTGTAACAAGACAAATGATCGCCATGAAGAGGGCTTTG GTCGATTTTTGGCAGCTTGCATTTTCGTATCAAGTTAATCCTCTGGCAGCTGTCGAACCACTCGCTGCTGCGGCACGTCA AGCTCAGTGA
Protein sequence (LotjaGi1g1v0644800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTDSDSLAAIWKEIEVSESYLVCSMYEEAASLASSILKRLCDPRQDIATQDMLESTAMVLVQALNQLGRTPEILNQLKLY FISVKAFPARVLLTGVCFQIAEGSASGVREFLEEFLNGWSLVDAQYRAVIAESNVDHQRRYETQYVLGIEEYLEIVEVYV ITLLATVLKDVDLAISWIENASLPEENRQGLLRRLHSLHSLKSTTLSQISSQQSPTNNNEAYSLKELDAREGSPKALKGK HADNKTHRSLGVSKLSERVETCFWCFRSINLKFGTAKFVISSGKIMLGCLILFFYYVFRKKQATLKRIVTRQMIAMKRAL VDFWQLAFSYQVNPLAAVEPLAAAARQAQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 277 | 277 | - | – | |
| PANTHER | 2 | 348 | 347 | 2.3E-137 | ||
| TMHMM | 276 | 298 | 23 | - | – | |
| Phobius | 278 | 298 | 21 | - | – | |
| Phobius | 299 | 349 | 51 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Peroxisomal membrane transport | The directed movement of substances to, from or across the peroxisomal membrane. |
Expression pattern of LotjaGi1g1v0644800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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