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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0646700 |
| Transcript ID | LotjaGi1g1v0646700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF639 family protein; TAIR: AT2G21720.1 ArgH (DUF639); Swiss-Prot: sp|P23502|SL17_ENTHI 170 kDa surface lectin; TrEMBL-Plants: tr|G7L0J4|G7L0J4_MEDTR DUF639 family protein; Found in the gene: LotjaGi1g1v0646700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120408717..120414210) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCAATCACCACGTGGCAACTAGCTAACTTCCCCACGTATAACCAACCTCTTCTCTTACATCACCATCATCATGAAAT GAACCTTTCGATTCAAGTTTCCTCAATTCTCTCATTGCATTACTCACTGAGCGTGAACCGCATAGAAGAAGAAAAAGAAG AAGAAGAGACCGCAATCGCACGGTTCAGTAATGGCGATGAAGCTCAAGTATCTCTCTTCCATTGCCGAGGACGTCGTCAA GAGATGTGCACAGTAAGTAATCCTGAAAAAATAAGTGCGACTCGTGGTTTCAGAGGCATGTCCTGACCCGTGGCGGTGAT TGGAGGCGAACCAACATAATTTTTTCTTCATTGAAACAATATACTAACAAATGCTTTTGTCACATTGCTTAGGAAACTGG ACATTTCGGAAGAGACATTGGTGGGAGAATTTGAAAGGGGTTGGAACGCTGCTGATACAGGAAATTACTGCAAGGATTTA GTTGAATTTTGCAGTGGGAATGCTCTGAGTGAAATTTGCAAGAACGTAGAGGAAGAGATCAACAATGGTGAATTTAGCAG GTTGACCTATGACATGATGCTTGCATGGGAGAAACCTAGCTACTATGATGACGATGATCCAGCGGTGCGCATAAAAACTC TCATTATGTTAATTTACTATTTTGGTGCAACATGGGTAATTAAGCGTGTGTTTAGATCAACGTTAATTAGCATAAGCAGA ATTGATTCTGGACAGAATTGATTCTACTAAAATTGCGTATGGCGAATGAGTTAAAATTATGTCATTTAGTTCATATACTT TATGAAAAAAGTCGCGGGTTCTAGAGTAATATAATGAAATTCCGTTAGTAAAATCTCATAATTGATTGATTATATTTAAC GCAGAAGCAACTATTTGTTGTGTCAATTAGAATTAATTCTATAGAATTGATTCTGCTTTACTGGCACAGCCAAACATGAT TTCAACTGGTTAGAATTGATTTTAACGAGTAGAATTGATTAATGTACTTTAGGGGGAATTGGAAATGTTTGAGATATATG ATGAATATCTTGATCATGGTGAATGATTTAATCAAGTTAATTAGATGGTCTAATGTGATGAGGCTTTTTGAGGTTTGCAG GAGGCTGCAGCAAAGGAAAAAGAAGAAAGGAAGATAACTCTTAAGGCCACTCAAGAACAGGATGATATACCTCTGTTTTA TTCAGACATCATGCCCCTCCTTGTAAGAGCATCATTTCCCCCCTTTTATTTATCTTGTTATTGCATAATGCAGATGATGG ATTATGATTTTCCCCTAATTCACTCCTTTCTTTGTTGTTTGAAACATGTTTCTTGCATTGGAAATTTGGAGTAGAGTGAA ACCAAGCTTATTTGATAAAAAAATGCAAAACTTTAACACTCATTGATTTGTTGTAATTCATGTGGGTTCTGCTTCAATTT AATGAGACACATGAATTTCAACCAATCAATGTGTTGAGTAGAGAAGGTTCAAATGAGTGTTGCTAGCCCTCCTCCCTCTA TTTGATATGAGTGCACACAACATGTATAATTTTAGGCATAGATGACACTGGATACTCTTTGCATAGCACATTTTGTTTTC TAATCTAGTTTCATAAACTATTTGGCCAGGTGAATAATGATCCCAATGTTGGAGAAGATGCTTTTGTATGGTTGGGATCA TTAGTTCCATTGGTAGCAGATGTAGCAAATGGAAGGTTTACGTTTGAAACTCTAACAGCACCAACCGGCCTCCGACTACA CTTTCCAGCATATGACATGTTCTTGAAAGAAATGGACAAGTAATTCATTGAACTGATGAAAGATAATTTTCTGGTACACT TGCATGCATCTGGAGTTCAAATGTCTAATAGCTAGGAAATCCTCTTTTCTGTTTTATAGCTAGTCATGTTTTTGGAAGGC TGTTTGAAAAATATACATGCTTTAGTAGATGATGGCTATCTTGGCTTATTTAGTTCCTGAGCATGTCAGTTATGCAGGAT ATAAATTATCCAAGCTGTCTGTGATAAAGAACATGTTGAAATGCTGAAAATGTTGACTGTAACCATATATGTTCATGTAG ATGTTCATTTAAGTATGAATTGATATAGAACTTCCTGATGATTGAACTAAATTTTTAAGTCTATTAAAGGGTAGTTATTA CTTAGAATCCTTTCACATGAGGTTGACTTCAATACTACAAAAACAACATGCCTCTAGATATAAATTAAAATATGTATGCA GTAAAAGAAGTCCAAATTCTTATTACGCTTTATTTTCAATTTCATGATTCCATAGGTGCATAGGACATTTGCAGAAACAG GCAACACCAAATGGTGTGGAACTGGCTGATGATGAATTTATATTACATGTAGATGGAATCGCCAGTGCTCAGAGGGTAGT TCGCCATATTGGAACAACAAGTTGGCCTGGTCTGCACTTCAGTCTATCTGATTAATTTTTTTATAGTGCATTAGAATCCA TTAAACTAATCTATTCACATGAAAATTTAAATGTTCCTTTCATCTAAATTTTCCAGGTAGGCTTACACTGACCAATTATG CTCTGTACTTTGAGGCTTCGGGAGTAATAAAGTATGATGATGCTCTCAAAATAGACCTCTCCAAAGACGTTGAACATAGT GTTAAACCAGTTGCTACAGGTCCATGGGGAGCTCAACTGTTTGACAAGGCCATAGTCTATGATTCAACTGATTTGTAAGG ACACTAGGATAGCAATTTTTACCATTATTGATATCTATTTTTGAGTTATGATAAAGGCTTTGTCTACCAGAAAAGTCTGG TTCACAAGTTAAAACTTAAAAGAGTTTCTCTGCAAATTAATTTTAACATATAAGAAACATATTGTAAAGAACATGTACTA AATGTAAACACTTGGTTCAGGCGTGGACCAGTTTTTAACATGGTTCACCATAGAATTGCCCTATGTTAAATATCCAATTT TAGATTTTATAACTAATATGTATACATTTTTCTTCTGAATTTTCTAGATCAGAGGGTATTGTACTGGAGTTTCCAGAGCT TACAAGTTCCACAAGACGTGACCATTGGCTTGCATTGATAAGGGAAATAATGTTTCTCCACCAGTTTTTATCAAGGTACA ATATAAAATGCCCAGTACAATCATGGGAGATGCATGCAAGGACAATTTTGGGAATCGTAAGGCTGCATGCAGCAAGAGAA ATGCTAAGAATATCACCTCCTGTCCCAACTAAATTCTTAATATTTTCCTTATATAATGAGATACCAAAAGGAGACTATGT TCTAGAAGAGCTTGCTCGAAGCCTAAAAAATGTCGATAGTGGACAGACATGTAGTGCAAGTTCTATCCTCAAGAGTATGA ACATATCTAGGCCCGCGATTTCTGATTTAGTAGTAGAAGATGTAAGTCAAGCAGACAGCAATTTTAATGTTTTAGAGGAG AGTCCCTCCTTGGTGTCTGCTATCAAACAATCAAGGGAGGAAGAAAAGCAAGTTCTCATTGCTAAAGCTACCACTGAAGA GTTAAAGGAGGAAGGAGTCACTGACAGTGTTCTTGTTCTAACGGTGAGTATTATAACCTAAACAAGGCTTACAAATATCC TCAATTGATGATCTCAATAGAACACTGATACATATTATATAAAATGGTGTTGTTTCCTTGTAGCAGAGAGTATACTATTA TACATTTCTATCTATTTCCTATTTAATTTGGGAAAATGAGAAGATTGAGGTCAACATTACAAAATAATTAATGCTGTAGG TTATGGTTTTCCTGAAAAAGGGCCGTAAGATGTTTTTAATTCAGTCTTCTGTTGAGAATCAGAAAACAGGGTTATCCTAA AATGAAAAGAAAGCATTTGCTAATTTTTGTGTTTGTTTTTTTGGGTGTAGGAACTGCTAAAGCCACTTAAAAATGTGGTT CCCTGGGTTAAAAAAATCTTCACATGGGAAAGGCCAATAGATACTCTTGCTGTTCTTGCTGCATCCTTGATAATCACCTA CATGTAAGTTCTTATTTCTTAGTTCATTGCTCTCTTTTTTAGCTTATATACCTGTCTATTGTGTTATATGCTTAAAATTT TGTCAATGACATGAGTGAGTTTTGCTAGACATGAAAGTATGTAACATCAGGTAGATAATGCAGGGAGTGGGTTGGAAAAG CAGCTGCAGCTTTCTTGATTTGGGTAATAGTAAAGATGCTTAAGGCAAGAGAACAAAAGATCAATGAGAAATGCAACGAG ATAGTAATCAGCAGATCAAGTATGGCTTCTGATCAGTCTACAGTGGATAGCATCGTCTCAGCGCAGCAAGGACTGTACAC TGTTCATGAGATGATGCAGATAGCAAACATAGCAATGCTGAAGATATGGTCAATCCTTATTTCAAAAGCTGATAAGGTAA ATTTCTTCTAAGATGTTTTTCCCTCAGTTATCAAGATATTGGTGACGATTTATTCTAGCTTATAGAAACACCTTTTTAGG ATGATGATGTAGCAAAAGTTAAAAGAGGTTTAGAGTTTAGACATTGTATCTTGTAGTACTTGGTATGATTTTCGGATACA CACCCTTCCTTTGAGAAATTTATTGAAATATTAAGCTTAAAATAACTTATATATGTAGGTATAAGTTCTTATTTATAAGC TAATGCTAGCAATCACATAAGTGCTTAACGTATACCTGATAAACTCAGGTAAGCTCCTCCAAACGCGGCCTAAATGTGTT CTATGGATTAAAAGCCTTTTCTAGCTCTTTCCTTTGGGGACAGAACATTTTGGATAAAGCTATTTAAATGATTAGAATTA ATGCACTTTTGGTCAATAATCTATGAGATGACATAGATATAGATCTTCAAAGAAATAAAATTAATACACTTCCTTCTTTT TTCAATCCTTTTGGTGGTGGGTTGCTTTCTTTTAGTTGAAGATGCTTCTTGGTCAACTTGATTCTAATAAACGCAACTCC TTGTTCATACTGCAGCATGCAAATATAGTGATGGTGGCACTGGGCGTATTGGCGGTCTTATTGGCCGTGGTTCCGTTCAA AATCTTCATTATGGGTCTGATTGTGCAAAGCTTCACCATGTCACTCAAAATGGGCAAGTCTTCTGGACCAGGGAATAGAA GGTTGAAGGAATGGTGGGACTCCATTCCAGTTGTTCCTGTTCGTGTGGTAGACAATGATCCTAACACTGAATACACTAAA TAGTTTTTTGTTTTTTTCACTCCTGTTTTATTAGATTGTCTAGTTTATAAATGTAGCCTGAGCCTCTGCTCCACAATATA TGTCTTTCATGGGTATACAGGGAAGTTATAGTATACATGACAACAGAGAAGACATTGAAGATACATGTATATTAATAATA AGTTATCTGCATAGTTGAGGTTGTTTCATTATATTTCTTGCTTCAAGTGTTTCAAAAAAACTGTGTATAATATGGAAATG AATAAAGTATTATTACAGAGCTTGTTCAAACTTTAATTATATTGGTTAGTTCGT
CDS sequence (LotjaGi1g1v0646700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATGAAGCTCAAGTATCTCTCTTCCATTGCCGAGGACGTCGTCAAGAGATGTGCACAGAAACTGGACATTTCGGA AGAGACATTGGTGGGAGAATTTGAAAGGGGTTGGAACGCTGCTGATACAGGAAATTACTGCAAGGATTTAGTTGAATTTT GCAGTGGGAATGCTCTGAGTGAAATTTGCAAGAACGTAGAGGAAGAGATCAACAATGGTGAATTTAGCAGGTTGACCTAT GACATGATGCTTGCATGGGAGAAACCTAGCTACTATGATGACGATGATCCAGCGGAGGCTGCAGCAAAGGAAAAAGAAGA AAGGAAGATAACTCTTAAGGCCACTCAAGAACAGGATGATATACCTCTGTTTTATTCAGACATCATGCCCCTCCTTGTGA ATAATGATCCCAATGTTGGAGAAGATGCTTTTGTATGGTTGGGATCATTAGTTCCATTGGTAGCAGATGTAGCAAATGGA AGGTTTACGTTTGAAACTCTAACAGCACCAACCGGCCTCCGACTACACTTTCCAGCATATGACATGTTCTTGAAAGAAAT GGACAAGTGCATAGGACATTTGCAGAAACAGGCAACACCAAATGGTGTGGAACTGGCTGATGATGAATTTATATTACATG TAGATGGAATCGCCAGTGCTCAGAGGGTAGTTCGCCATATTGGAACAACAAGTTGGCCTGGTAGGCTTACACTGACCAAT TATGCTCTGTACTTTGAGGCTTCGGGAGTAATAAAGTATGATGATGCTCTCAAAATAGACCTCTCCAAAGACGTTGAACA TAGTGTTAAACCAGTTGCTACAGGTCCATGGGGAGCTCAACTGTTTGACAAGGCCATAGTCTATGATTCAACTGATTTAT CAGAGGGTATTGTACTGGAGTTTCCAGAGCTTACAAGTTCCACAAGACGTGACCATTGGCTTGCATTGATAAGGGAAATA ATGTTTCTCCACCAGTTTTTATCAAGGTACAATATAAAATGCCCAGTACAATCATGGGAGATGCATGCAAGGACAATTTT GGGAATCGTAAGGCTGCATGCAGCAAGAGAAATGCTAAGAATATCACCTCCTGTCCCAACTAAATTCTTAATATTTTCCT TATATAATGAGATACCAAAAGGAGACTATGTTCTAGAAGAGCTTGCTCGAAGCCTAAAAAATGTCGATAGTGGACAGACA TGTAGTGCAAGTTCTATCCTCAAGAGTATGAACATATCTAGGCCCGCGATTTCTGATTTAGTAGTAGAAGATGTAAGTCA AGCAGACAGCAATTTTAATGTTTTAGAGGAGAGTCCCTCCTTGGTGTCTGCTATCAAACAATCAAGGGAGGAAGAAAAGC AAGTTCTCATTGCTAAAGCTACCACTGAAGAGTTAAAGGAGGAAGGAGTCACTGACAGTGTTCTTGTTCTAACGGAACTG CTAAAGCCACTTAAAAATGTGGTTCCCTGGGTTAAAAAAATCTTCACATGGGAAAGGCCAATAGATACTCTTGCTGTTCT TGCTGCATCCTTGATAATCACCTACATGGAGTGGGTTGGAAAAGCAGCTGCAGCTTTCTTGATTTGGGTAATAGTAAAGA TGCTTAAGGCAAGAGAACAAAAGATCAATGAGAAATGCAACGAGATAGTAATCAGCAGATCAAGTATGGCTTCTGATCAG TCTACAGTGGATAGCATCGTCTCAGCGCAGCAAGGACTGTACACTGTTCATGAGATGATGCAGATAGCAAACATAGCAAT GCTGAAGATATGGTCAATCCTTATTTCAAAAGCTGATAAGCATGCAAATATAGTGATGGTGGCACTGGGCGTATTGGCGG TCTTATTGGCCGTGGTTCCGTTCAAAATCTTCATTATGGGTCTGATTGTGCAAAGCTTCACCATGTCACTCAAAATGGGC AAGTCTTCTGGACCAGGGAATAGAAGGTTGAAGGAATGGTGGGACTCCATTCCAGTTGTTCCTGTTCGTGTGGTAGACAA TGATCCTAACACTGAATACACTAAATAG
Protein sequence (LotjaGi1g1v0646700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMKLKYLSSIAEDVVKRCAQKLDISEETLVGEFERGWNAADTGNYCKDLVEFCSGNALSEICKNVEEEINNGEFSRLTY DMMLAWEKPSYYDDDDPAEAAAKEKEERKITLKATQEQDDIPLFYSDIMPLLVNNDPNVGEDAFVWLGSLVPLVADVANG RFTFETLTAPTGLRLHFPAYDMFLKEMDKCIGHLQKQATPNGVELADDEFILHVDGIASAQRVVRHIGTTSWPGRLTLTN YALYFEASGVIKYDDALKIDLSKDVEHSVKPVATGPWGAQLFDKAIVYDSTDLSEGIVLEFPELTSSTRRDHWLALIREI MFLHQFLSRYNIKCPVQSWEMHARTILGIVRLHAAREMLRISPPVPTKFLIFSLYNEIPKGDYVLEELARSLKNVDSGQT CSASSILKSMNISRPAISDLVVEDVSQADSNFNVLEESPSLVSAIKQSREEEKQVLIAKATTEELKEEGVTDSVLVLTEL LKPLKNVVPWVKKIFTWERPIDTLAVLAASLIITYMEWVGKAAAAFLIWVIVKMLKAREQKINEKCNEIVISRSSMASDQ STVDSIVSAQQGLYTVHEMMQIANIAMLKIWSILISKADKHANIVMVALGVLAVLLAVVPFKIFIMGLIVQSFTMSLKMG KSSGPGNRRLKEWWDSIPVVPVRVVDNDPNTEYTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 503 | 503 | - | – | |
| PANTHER | 2 | 667 | 666 | 0.0 | – | |
| PANTHER | 2 | 667 | 666 | 0.0 | – | |
| Coils | 98 | 118 | 21 | - | – | |
| Pfam | 441 | 666 | 226 | 7.6E-63 | ||
| Phobius | 504 | 532 | 29 | - | – | |
| TMHMM | 510 | 532 | 23 | - | – | |
| Phobius | 533 | 603 | 71 | - | – | |
| Phobius | 604 | 630 | 27 | - | – | |
| TMHMM | 607 | 629 | 23 | - | – | |
| Phobius | 631 | 675 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0646700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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