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LotjaGi1g1v0647000.1

Overview

Field Value
Gene ID LotjaGi1g1v0647000
Transcript ID LotjaGi1g1v0647000.1
Lotus japonicus genome version Gifu v1.2
Description 2-aminoethanethiol dioxygenase-like protein; TAIR: AT5G39890.1 2-aminoethanethiol dioxygenase, putative (DUF1637); Swiss-Prot: sp|Q8LGJ5|PCO2_ARATH Plant cysteine oxidase 2; TrEMBL-Plants: tr|Q2HVC5|Q2HVC5_MEDTR 2-aminoethanethiol dioxygenase-like protein; Found in the gene: LotjaGi1g1v0647000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:120446486..120450088) extracted from Lotus japonicus Gifu genome v1.2.

TCTCCGTTGCCTCTCACCGCCTCAACCCACAAAACAGGGGTCGCATTAACCGCCAGTTTACCAACAATCTATGGGGGCGG GAACTACACAAAAAATACTGCTTTTGCATTTTCCTTTTTCTTTGGTCTAACTTCACCACACCACTGTTTCAGACAATGCA ATAGAATAGAACAACTACTATACCATCTTTTTTGGCCCCTAGTTTTCAACCTTTAATATTATCTCTTTCTCTGTCTTCAT CTTTATATACAAAACAAGTATCATCTCCAACATTCATCATATATAGCTAGCTATATAGCCTTCATATATTGTCCTTTATA ACTCTCATCCTCTAATGTACTTTTGCACTATATGGCTGTAAATATCAATCATCTTCTTACCTACCCTTTGACTCAACCAT AGCTATTTCATTTCAAGACTACAGAAAGTTCATTTTTTGACAGTTTTTGGATTCTGGGGTGTTGAGTTTTCTTTGTCAAT TCAAAAGTTGAAAGCAAAACTGTACTTGGGAATCCTAGCACACTTTTGTGTTTGTGTTTTTGGTGTGGAAGAGTTTTTGT GAAAGGACTGAGTCCTATTTGAGTATTCAGTTAAGGAGATTTGGTTTTTGGTGTGTGTTGATGGGAATGGAAGCAAGTTT GGTTGATCCGGGTAGAGACAGAGTTGGACATGTTAACAAGGTTGGTTATGTGAGAAGGATCATTGCCAAGAGGAGGAAAC CTTGTCGCAGCAGGGTTAAGAGGCCAGTGCTGGCAGTACCAAAGGCTCTTAAGGATCTGTTTGATTCATGCAGAGAAACA TTCAAAGGCCCTGACACTGTTCCTTCACCACAAGATGTTCAGAAAATGTGCCACATCCTTGGTATGATTTCTTTGCATTA ACTTGATGTGATGAGTTTGGATAAGAAAATTGAGTTTCTCTTGATCTGTCTTGTTACATAATTTCCACGTTTTGGGGTCA GGAATCTTAGTTTTGGATGGAATTTTAGGTGATTTCAATTACTTAGAACTACAAACTAGAAATCCCCCCCACTAATTGTC TTTTGGAGATGATGACTTAGTTTTGCATCATGTTACTAGATCAATTCTTTTCCCAATTGAAGGAATTGATAATGTAACTT CACTTTTAATTAATGAATGCATATATTATGTTGTCATGTAGAGATATAGAAATTAAGTCAATGTAGGATCATCTCTTAGG ATTAATGGTTGATTTGAAGGTATAGGTTTCATTTTTTCATACCAGTTTGAATGAAAAACAATAGACTAATTTTTGCTTCC TTCTACAAGTTGATTGATTTATTTTTTCTTACAATTTAGATGTTTATTTTTATCTCCTAGTTTCCTTTTTTCATGTGTTC TAATTAATTCTTCAATCATCAGATGACATTAGGCCAGGCGATTTTGGGCTAAGTAGAGATCTGCAGTTCTTCAAGCCTGG AAATATCATCAAAGAGAACCAAAGGGTCACCTATACAACCGTGTACAAGTGTGCCAATTTCTCAGTAAGTGTTGCAAATT CTAGTTTTTTTGTTTTCATCACTCATTAGTCCCTACTAGCATGTTTGGATCAACTTCTCTATCCTCATGAACAATTATGG TACACAGAAAGCTTCTACTACCCAGAATTGATTTTGTTTCAGACTGAATTGTAGAAGAATTTTCAAATATACATATTCAA ACCACTGCAATTACTAGTGTGTACTTAATTTATGGGTACTTTCTTCTTGTGTTCTTGCAGCTTTGCATATTTTTCATACC TGAAAAAGGAGTCATTCCACTCCATAACCATCCGGGTATGACCGTTTTCAGCAAACTTCTATTAGGACAAATGCACATTA AATCTTATGACTGGGTTGTTCCTGAGGCCTCTGACAACTTGTTAGAGCAAACAACTAAATGTAGGTTCTCCATTCTCTCA CTTTTATTATTTCTTGTGCTTTGACCATAAGCTAAAGGGGTGTGTTAGGATTGGAAAATTGACCCCCACAGTTTCTGATT TTTTGCAGTGAGATTAGCAAAGTTAAAAGCTGATAATGTCTTCACAGCACCCTGTGATACTTCAGTGTTGTATCCAACAA CAGGAGGGAATATCCATGAATTCACAGCCATAACTCCATGTGCTGTGCTTGATGTCATTGGTCCTCCTTATTCCAAAGAA GATGGAAGGGACTGTTCTTATTACAGAGATCACCCTTATGCTGCTTTTCCCAGTGAGTACCAACACTTTGAGCATGTTTG GATCATGTTTGATCAATTTCTCTTCATCAGAATTGAATTTGATCGACTTCAGAACCAATTGTAAAAGAGTTTCCAAACAT ATTTACCAAAAGTCCAATTCACATCTATATTAGTATTTATGATACTTCTTTTTCCTATTTCCATAACAGGAAATTTTGCA TTGAAAATTTGAACATAGGGTCAAATGTTTCTATAAATTTTCCTTGGTCAAGTTTTAATATATGGACTGTGTTAACATCA TCTTAAAAGCTGCCATCTGATGTAGCTCAATATTGAATTTGAAAAAGAAAAAAAAAAGAGCCAGGTTATGTGCATAAAAG GTATAACAGATAATAGTATGTACTATTGTGTTTGTACATCATTAATTAGTCCTATTTGCATAAGATGGCACCTTCACCTG CCCCCATTATTGTAGTGTCTGACTATGTATGTATAATTGTACATTCTTGCTTTGTCTTTGACCATTAATGATTCTATCTT GCAGATGAAGAGATTTCTGAGGTGAAAGACAAAAATGATAGCTACGCGTGGTTGGAAGAAATTGAGATGCCAGAGAATTC TCAAATGGATGGGATTGAGTATCTGGGTCCTCCCATCACTGAGACAGCATTTTAGTTATAACACGTAGCATGTTTCGATC AGCTTCTCTTTTTTCTGAATCGGTTCCTGCGGGCAGAAGTTTACAAAAGTTTCTCTTCATAATTGATTTTGAATTTGAAA TCAATTATAGAAAGATTACTATGTATGTACTTAGCATGTCACCTTGTGTTTCCACTACAGGCATACACACATAGGACCCC TTCCTTTTCCTTTTCTGTCCATACTTGAGAATCAATGCAAGTGTGTTGGTATTTTGTTCTTCAGTGCTTAAATTTTACTT TGAAAAGTATTAACTACAGTTCATTCATTTTAGCTAGTTGGTGACTGACTTGGTGTACATACATAATTACATATGAATAT GATAACATTATGAAACTAGCTGCCAATTAAGTAAAGAAAAACCATGGGCTTGAGTTTGTTCATCTGTCAATATTTTCACT TGAGTTTTGATATGACATTTGGGTTGGTTCCAGAGTGTAAAGGGTAGATTCGTGTCAACTTCATCGTGCAACAAGTGGTG AATATGACCGAGAGTTATGTAAAGTCTTCCACATGGGCAACCATTTCCAAAGAACAGTCAAATTTGTGCTTTTCTTTCGA TATTTATGGGACGCTAATATTATCATTATTATTCTTCTTAATTAAATTAAATAAGAAAGGAAATTTCTTCTGCTTATTAA TAAGGTAAGCAAGACGAAAATACAAGAACACGGCGGTTATTTGTTGACTCTTTCATGCCGAATAATGTTATCTTGAATCT CAT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0647000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAATGGAAGCAAGTTTGGTTGATCCGGGTAGAGACAGAGTTGGACATGTTAACAAGGTTGGTTATGTGAGAAGGAT CATTGCCAAGAGGAGGAAACCTTGTCGCAGCAGGGTTAAGAGGCCAGTGCTGGCAGTACCAAAGGCTCTTAAGGATCTGT TTGATTCATGCAGAGAAACATTCAAAGGCCCTGACACTGTTCCTTCACCACAAGATGTTCAGAAAATGTGCCACATCCTT GATGACATTAGGCCAGGCGATTTTGGGCTAAGTAGAGATCTGCAGTTCTTCAAGCCTGGAAATATCATCAAAGAGAACCA AAGGGTCACCTATACAACCGTGTACAAGTGTGCCAATTTCTCACTTTGCATATTTTTCATACCTGAAAAAGGAGTCATTC CACTCCATAACCATCCGGGTATGACCGTTTTCAGCAAACTTCTATTAGGACAAATGCACATTAAATCTTATGACTGGGTT GTTCCTGAGGCCTCTGACAACTTGTTAGAGCAAACAACTAAATTGAGATTAGCAAAGTTAAAAGCTGATAATGTCTTCAC AGCACCCTGTGATACTTCAGTGTTGTATCCAACAACAGGAGGGAATATCCATGAATTCACAGCCATAACTCCATGTGCTG TGCTTGATGTCATTGGTCCTCCTTATTCCAAAGAAGATGGAAGGGACTGTTCTTATTACAGAGATCACCCTTATGCTGCT TTTCCCAATGAAGAGATTTCTGAGGTGAAAGACAAAAATGATAGCTACGCGTGGTTGGAAGAAATTGAGATGCCAGAGAA TTCTCAAATGGATGGGATTGAGTATCTGGGTCCTCCCATCACTGAGACAGCATTTTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0647000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGMEASLVDPGRDRVGHVNKVGYVRRIIAKRRKPCRSRVKRPVLAVPKALKDLFDSCRETFKGPDTVPSPQDVQKMCHIL DDIRPGDFGLSRDLQFFKPGNIIKENQRVTYTTVYKCANFSLCIFFIPEKGVIPLHNHPGMTVFSKLLLGQMHIKSYDWV VPEASDNLLEQTTKLRLAKLKADNVFTAPCDTSVLYPTTGGNIHEFTAITPCAVLDVIGPPYSKEDGRDCSYYRDHPYAA FPNEEISEVKDKNDSYAWLEEIEMPENSQMDGIEYLGPPITETAF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22966
17 284 268 2.2E-150 –
PANTHER
PTHR22966:SF39
17 284 268 2.2E-150 –
Gene3D
G3DSA:2.60.120.10
37 234 198 1.3E-5
IPR014710
SUPERFAMILY
SSF51182
47 237 191 1.65E-30
IPR011051
Pfam
PF07847
79 280 202 5.7E-71
IPR012864

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016702
Molecular function Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0647000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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