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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0647200 |
| Transcript ID | LotjaGi1g1v0647200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT3G03770.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q8LFN2|Y3037_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770; TrEMBL-Plants: tr|I3S0E5|I3S0E5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0647200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120474998..120477888) extracted from Lotus japonicus Gifu genome v1.2.
CACAGAAGTTCTGATACCATGTCTTGAACCGACAATCCCAAAATCATTAGTCGATGTTAGGTGAAGACGCATTAATAGTT TTATAGTATATTTCTAACATTTCATCTCGGTATCAAGTTGTAATCTGGGAAGCACGGACACTTCAAAACAGAGGCGTGTC CGCGTGTCCGACACGCGGACGACACGGACACGCCACCGACACGTGACCGACACGTGTCGGACACGTCTGAGGCGTGTTTG AATAAAAAAACATTATTTCTTGGCTCGGACACGGCTTGGACACGGCTTGTATATTGAGCCGACACACCTTTGTGGCTGGA CACACATATGGGACACTTATCTAATTAAACATCAAACAAACGTAATAAAAAACAATGATTCAGTGGGCTCATAACGCACA AACACGACGCTTCTCCTCTCCTCTTCTCTTGCGTGTTTCATCTCCTTCCTCCGCCAGCGGCGGCGCTCCTCCTTCTCCAC CAGCGGTGACGTTTCCTCCTACTTCTTGGTCTTCTCTCTTGCTTCCCTTCTCTGTTACTTGAAATAGGTAAGACCTTTAT TTTGTTTTCACTCTGATTTTGCAGTTTTTACTTGATAGAGAGAGTGAGCATGGTTAGATTATTTGTGTTTATGAGTATTG GATATTGATATTCTGGTTTTTGCTTCCTTCTTTGATGTACTGTGAAGGCTTTCTTCCCTTGCTTTTATTGGTTCTTTGTT TTTCCTGTTTGTAATAGGGTTTGCACCCCTTAAGTGCAATTCATTTATTCAATCTCATTTTACTGCACATCATTGTACTT CAGAATTGTAAGATCAATCTGATTAGGTATCAATAGTGTTAATTACAAATATACAGATATACTATCCTAAATTAGTTTCT TAAGGTTTCTCCTAATCGATTATATTATATGTACATATACACTACCATAAATATGTAAGACTTTCTGAAATTTTTGATTA CCATACAGTCAGACTAATGGTTGAATGATGTTTTAGTTCAAACTCTCCTAATCTTTGGTAAAATGTAGCCTGATATTGAT AAATAGTACAATTTTCAAGCTTCTTTTGCTTCTATTAAGAAGCATTGTTACTGACTTAATTGTGTGTGTTATTGTATTGA ATTGATCAACATATTATAGTACAATGTTCTCTTAATTTTGTGAACATATTATCATGTTTTTTAATATATATATATATATA TATATATATATAAGCCGTGTCCCCGTATCCTATTTTTTAGAGTTTAGCCGTGTCGGCGTTCCCGCCCGTGTCCGTGTCCG AGTCCGTGCTTCATAGGTTGTAATGGAAGATTAAAACAATAATGCCATTTCTTCTCTCCTCCATCTGACTAGTATTTTTT TTACTTTTACAATTATGGTATTGATGCCTCATCTATTTTCTGGCAGATGGGCATGTTAGAAAATCCCTGAATTGGACCCA ACGCATAGGAGCTGCAATTGGAGTAGCAAAGGGAATCCAATTTTTGCATACAGGGATTGTTCCTGGTTTATATTCCAACA ACATCACAATAGAAAATGTTTTGTTGGACCAAAATCTTGTTGTGAAAATCAGCAGTTATAACCTGCCTTTGCTATCTAAC ATGGGAAAGGTATGTTTTATAATATGAGATTAACTTTGTTCTTTAATTTTCCTTCAAAATAATGCTTCGTGACATTTGGT ACTCATTCACCTTAGCTTAACGTTGCAGGTTCGGCATGGAAATTCTTCGAACGGATTAAAACATTCTAGCATCAATAAAA GGTGCGCGGTAGAAATTGTCCATTTCTGTCAATCAGTCCTAACATGCACACAGTCTCTGTTAATGAAAAACAGAACTCAC CCACATTGTCATTTACATACCATATTATAGGAGTGGTAAGGTGTCATGTAGAAAAATACCTAGGATCATGATTACTAGTG TTTGAGCAAGCTTTTTGAAAAAAAAGCAAGCTTTTTGAAATGATTTCTGCTGTTTTGTAGTGTAAAGCATGAAGATAAGT CTGATATATATGACTTTGGAGTAATACTACTGGAACTCATTCTGGGAAGGACAATAAAGGCAACCAAGGATGCAGATGCT TTTAAGGATCTGGTAATAACATGAACTCTGAATCATTTTCCATGTGACAGTTCCTTTGCCAATATTGCTTTCTTTAAATC TTTCAAATTTATTAACCATCAAATTAATAAAATTTTCTGATGTTTAAATCAGATTTTAACTCTCATCACTTATGCATAGC AACTCATTATAAATCATTTGCAATTCTATGACCCTGATTCTGTCAATTGTATCATGATCATGCAGCTGCAAGCAAGCATA GGAGCTGATGATGAAGCTCGAAGAAGCGTTGTTGATCCGGAAGTTCGCAAGTTAAGCTTGGATCAATCATTGAGGACAAT GATGGAGATTTGTGTGAGGTGCTTGGCTAAAGAGCCAGCAAATAGGCCTTCTGTAGAGGATGTTTTGTGGAATTTACAGT TTGCTGCTCAAGTTCAAGATGCATGGAGAGGGGATTCTCAGAGTAGTGAGGGTTCACCCAGCTCGCCTTTAGAGCCTCGA AAACTAGCCTTCCATTAGTGTCAATCAAGATATTTTTACCTTTGTTTTTTGTATATTTCACTGTAAGCTTATTAGATTAA TGTTTGAAGAATATAAACTTTATAGCTTAAAGCATTAGAGAGTAGTACAAGTTCTCAATGTTGTAACACCTTGGCATAAA GAGCCAGTTTGAGTAAAGTTTGAAAGGAGCACTTGAGTTTTTGGGCTGAGAGTTTAAGACATTATTGAGGTTTTCTTCTT TTCATCTTGATGAATAGTTTGTTTATATGATTTGTTCATAATACCCAAGATGTCTAATTTCTCCTCGGGCCAACTTTATG TTAGTTTTGTT
CDS sequence (LotjaGi1g1v0647200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAGGTTCGGCATGGAAATTCTTCGAACGGATTAAAACATTCTAGCATCAATAAAAGTGTAAAGCATGAAGATAA GTCTGATATATATGACTTTGGAGTAATACTACTGGAACTCATTCTGGGAAGGACAATAAAGGCAACCAAGGATGCAGATG CTTTTAAGGATCTGCTGCAAGCAAGCATAGGAGCTGATGATGAAGCTCGAAGAAGCGTTGTTGATCCGGAAGTTCGCAAG TTAAGCTTGGATCAATCATTGAGGACAATGATGGAGATTTGTGTGAGGTGCTTGGCTAAAGAGCCAGCAAATAGGCCTTC TGTAGAGGATGTTTTGTGGAATTTACAGTTTGCTGCTCAAGTTCAAGATGCATGGAGAGGGGATTCTCAGAGTAGTGAGG GTTCACCCAGCTCGCCTTTAGAGCCTCGAAAACTAGCCTTCCATTAG
Protein sequence (LotjaGi1g1v0647200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKVRHGNSSNGLKHSSINKSVKHEDKSDIYDFGVILLELILGRTIKATKDADAFKDLLQASIGADDEARRSVVDPEVRK LSLDQSLRTMMEICVRCLAKEPANRPSVEDVLWNLQFAAQVQDAWRGDSQSSEGSPSSPLEPRKLAFH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 14 | 133 | 120 | 7.5E-15 | – | |
| PANTHER | 17 | 136 | 120 | 6.9E-50 | – | |
| PANTHER | 17 | 136 | 120 | 6.9E-50 | – | |
| SUPERFAMILY | 23 | 123 | 101 | 2.71E-10 | ||
| MobiDBLite | 126 | 148 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0647200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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