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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0649700 |
| Transcript ID | LotjaGi1g1v0649700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein CyaY; TAIR: AT4G03240.1 frataxin-like protein; Swiss-Prot: sp|Q9ZR07|FRDA_ARATH Frataxin, mitochondrial; TrEMBL-Plants: tr|A0A151TAC9|A0A151TAC9_CAJCA Frataxin isogeny; Found in the gene: LotjaGi1g1v0649700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120833956..120840579) extracted from Lotus japonicus Gifu genome v1.2.
CACACGAACATAGGCACAGGTGCGAGGACAACTACTACTACTGCTACATCCCTAGCTGCATTGTGCATCACTCTATGTTT ACGAGGGAAAGGTAAACCTCTGTTTTTCTCGGAGGTGATAGCGCACGCACGCTACGGGCGGACCCACTCACAGGCTAGGT GTGGCTTGGTTTTTTTTTTTTAAAAATTTATATGGTTGAAAAAAAAAAGAAAAACCCTTTCTGTTTTCTCTCACGCACCA CGCTCCCTCTCTGTTTTCTCTCACGAGTCACGACTCCCGCACCACTCTCCCTCTCGGCCTCTCTCTGCTCTCTCTGCTCT CTGAAGGTAATGTTTTCTGCCTTTCTCACTTCCCTGAATTTTCTTTGTATTGGGTATTTGGGTTTTCTGAATTCTGATTC TGAAAAAGGGTTTGGGACTTTGGGTTCTTGTTCTAGGGTTTGAGGAAATTGAAATTGACAGTGTGAGTGTCCTCCGTACA ATTGTATTTCACTTCTGTTCAGCAAGTTGCGTTTCCTCTATTGAAGTAACTTGACTAGTTAAGTTGACTCAGAGGCTATG TTGGACATCTAATGATAGCTGTAATGAAATAAAATAAGATGAAATGGAATGTAACATAATAAGGCTATGTTGGCCTGTTA TTGCTGTTTATGCTGTTGTTGTCTTGCTGGTTGAAAGAAAATTAGGATGATGCTGTCTTGCTGTTTTGTTGCTGTTGCTG TCTTGCTGTTGGAAAATTATGTTGTTGCTGTCTTTACTGTCTTGCTGTTGTTGCTGTCTTTACTGGCTTGCTGTTTTCAC TGTTTTATTTCTTTTGTTATATATCGTTGTAAGCCTAGTCCTTCTTGGATTATAATGTAAACTCTTCTATTTCCATGAGA AACTTTCTCTCATGGTTTTATCTATAATATTTCTCTTTTTCAAAAAAATAAATATTTTCAATATATTTTAGTCTATAATT GCTTTTATGTTTAGCCTCACTGATATTTGTGGTCTGGATCCGCCCATGAGTCGCTACTACTCGGTTTTTCTACTCAGTCG GCAACAAGAAGCAACCGAACAGGTTCTCTCCTTCTCGCATATAAATTCCTGGGTTCTTGTAATCCTTAATTTTCTGATTT CTTATCAATTTCTGTTTGCTAATTGCTCTAAGTGTTGAGCATGATCACACACACGCATAATTTCATGCGAACATGACTCA GTTGCTAATTTTCACTGCTTCAGAATTGTGCCCACAAGGTGTTTGCTAAATTGCCACTTTGACACAGGAACATTCACTGC TGAGGTGACCAAAGCTATGGCTGCCAAGCTGCTTTTGCAGAGAAGGCTCCTCAGGTTCTTGACACTGTCACCACCCTCAT TACACTCCTCTTCTTCTGGTTACATTAATGGGGCACGGTTGCTTTCTCTGAAAGTATCAGAAATAGTGGGTCTCTTCAAG GGTAATGCACTTCTTTCTCCTTTTTCAACTTCTTCTAGAAGCTTCTGCTCTCGGGGTTCCAATCTTCTGGATGAGTCTGA AGTCCCCACGGCCGTTGATTACCGGTATGACATACCCTTTTGTGCTTTCTGTTCATGTGTTCTTATTTGATTCATGGATA CAATACAAAATTTGAACTTTTAACTGTTTTGGCTGTTTTTTTGAAGGAAAAAACATATCCTTTGTTAGCTTTTAAATTTC AGTTTTGGTTTTTTCTTTTAAAAAATCAATTGTTGAAATTCAAAGCATTTTCTAGAGAGGGTCTGACATTGGGGTTTGTG AGTGTTGGAAGAGCATCCAAATGTCAGTCACCCTTGCTAATGCCTCAGTCCATCGAAATGGTTGCTGTATTTTTATTTTT GGATTTTTCAATGGCTAGAAATGAATTTGCCAATGGTGAATGCGAATGCAGGTCTCTAATGGAGGAGAGTGAATACCACA GCCTGGCTGAGTCCACAATACATAACCTACAGGAAAAATTAGAGGTATCTCTAGCGTTGATTCATGTTTTGCACTGACTT AAATTTGTATTGTACATAAAACCTGGTTCCTTCCTGACATCCGTTGTAAATTTTGCCCTTCATTTTGCAACCTCACATTG TTTGGTAAATATGCATAAGTGATAAATTATGCTTAAATCAAATTTATTTTACTGGAAAACACAGTCTTATGTTATTCAAA GTTTAACCTGTATCAGTTGTTATTTTGTTTTGGTTGTTGCTTGGCAGGACTATGGAGACTCTATTGACATAGATGGATTT GACATAGACTATGGGGTGAGAATTCTTTTTTTGTGAGAATTTTATGAAGGGTTGATAACCACAATTACTTGTTAAATAAA AAGTATCCTACAACTTATGTATTCAGAAGACACATGAAGTTTTCTTGTCACATTTATAACTTAATAAGCTTTTTTTTTAT GAAACTCTAGTTATTTGGTCTTTAAAAAATAACTACATTTTATTTCTTTTAATATTTTAATTAATTTCTTCCTATTAGTT TTAAGAAGTGTCTTCCCTGTCTGGGAGGTCCGTTTATTAATTGTTTTAACATGGCTGTCCCTTTTCAGAATGATGTTTTG ACTGTAAAACTTGGCGATCTGGGCACTTATGTATTGAACAAACAAACACCAAATAGACAGATTTGGCTGTCATCTCCAGT GAGGTATTAGATTAAGTGTGTTTGTGGATCATTTGCTTATCTATGGCTTACTCCTTAGCTAGGAATTATTTTATTTTATT TTTAATCTCTGGCCATCATTATTCAAATATTACATTTCTTGTCAATACTTTATACAAAACTATTTTAGAAATTATATTTC TTGGATATCTTTATGTATGAGAATGAACTGGAGAAAATTCAATAGTTGGAGATAACAAACAACCAAATTGGTGTTAAAAG CAATATCTTTTTTAGAACATAAAAAGATATCTTATAATATCTAGATCATAGAGTAATTTAAGGCAATTTAGATTATTTTT TAGGATTAGTTTATTTATTTCATATTTATATTATTTATTTTCTTTAATCAGGATTAAGATTCTTAATTAGCTCCCCTATT TGACTTTAAAAGTCTACTATTAGTATAAATAAGGGTTAGTGCTTTGTTTTTGTGAGACATAATATATTATATCAATACAA TTTTGTTCTATGTATTTCTTTTTTCCTCTTTCTATACTTTAAAGACTAAACCCTTAGTTAAATTTTATCATTATTTTTAA TAAATATTATCTTTAGTATTAATACTTAAGTGATGCATTTATTTAGGCAACTCTCTATTTGAAACCATTTGCATATGGAC CTGTCTTGTCTTATTGGTGAAGGAGAAAGAAGTAAGGGTTAAGGAATTTGACAGTGTTAGTAGTTTAATAGTTAGTTGAG GTAGTTTTGGTTAGTTTGAGTTAGTTAGAAAGTCAGAGAAAATGTTATAAATAAGACTGAGTTAGAGAGATATATTGTCT TTTGGGATCATTGTAATTGGGCATTGGGAGACGTTTGCATTGTAGTGTTCGCTCGGAATTAGTCAAAGGGGTTATTGCCC CAGCCCACGTGGGTGTAAGGACTGTGGAGCGTGGTGGGATGTTAGGATCCAATTGCAAGGGTGTGGGGTTTATAAGGCCT TCAGCTCTCCAACTACACTGGCTAGTTTTTGTGGTATGGTTCACCCAAGGTTCTTTTCAACAAATCTCCGGGACTGCAAT TGCAAATCACCATCCCTACTACAAATCTACCCTCCCTTGCATTTTCATGCACACTATCAATTGCTATCAGCCCACAGCAC CAGAACACTTCTTTAATACCAATTTGATAGACACAAGCACTAAAGAAGAAAGAAAGAACTGTTTATTGAAGAAAATTAAT AAAACTCCTGGATATTCGAGAGATCCAGGTCTCTCGCAATGGCTAATTACAATTGAAGAAAATTAATAAAACTCCTGGAT ATTCGAGAGATCCAGGTCTCTCGCAATGGCTAATTACAATGATCCCAAAAGGTAATATTTCTCTCTAATTCTCACTTATT TATAACATTTTCTCATACTCTCTAACTAACTCTCTCAAACTAACCAAAAGTGCCTCAATTAACTAACTAAATCACTGACT ATGAGTATCAATATCAGAATTTCAATAAAATTGGTCTTTGGTTTGATTTCATTGTTTAAATTGCTATGTTCATAGTGCGG GGAACTGGGGGTATATATGCCAGGGTTCATTTTAATATTTTTCTTCCTTTAGGTAGAAAGTACTCACAATCCCTTATGAA AACTGAATTGAGATCATGGAGGAGTATCATTATTGATACGATACAGTTCTATTAAGATATAGGTTTAGTTATTTGTAATT GGATGTAGAGATCCTGCTATTTTATGTAGCAAATGACATGGTGTCATACAACATTGTATCTCCCCTCTCTGCTATTTTTA TCATCACCCCAATAAAGAAGTAGAACACAGACTGTCTCAAGTGACATTTTGATTGCAATGTCAATTGTCTGTTTATTTTG GAGGCCTTTATGTGATTCCAAGGCTTTAAGTGTAGTTCTATTATTGAAGTGGAATGCAATTTGATCCAAATATTTTACTG GAAAAATGATCTGCTATTTCTTCTGCTGTCTTCTTAATCTGTTTTGCTTAAACTATATGGCATTTGATGTCAAACATAGG CCGAAATAGGTACAATAATCAATTATTCGATATGACTTGTATAATCATATTATCTACTTCTCTTTACATATTCTTCTATC TCTTGGAGCTGTCTAAAAAACTCCATCTCTTTTGCAGTGGTCCATCAAGGTTTGATTGGGATCAGGATACTAAAGCTTGG ATTTACAGGCGGAAGAAAGTAAACCTGTATAAGCTTTTAGAAGCCGAGTTGGAGCAGTTGTGTGGCAAACCTTTTGTTCT TTCCTGAGGTATTGAGGTGCCACCTACTCATGCTTTTTGATTAAGAAGGCAAATCATTTATGATGAGCGTTTTGCGTTCC GAAATTATTTTCTCTTTCATCCCTTAGCCACCTTTTACTTATATCAGTTTATGTATCAGCTGTTATCATATCTTTTACAG ACATAAAGTGATTGTATCTTCTAAGTTCTAAATAATAACTTCTACAAAGAATTCTTGTGCAAATATGTTATTGTCATTTT ACTTGTTTGAAGGATTACAATTGCGACAGGCACTCTAGTAAGTTAGTAATTGCATTTTGGCATCCAATTCGAGGTTTAGA CAGATGATAAGTATGCAATGCATGATAAAGGTCAAAGAAAATAGAAAGTTTCTCTAAACAACCATTCTTTTGTTTTAGCC CATGTCAACCATTTGTATTCAAGATGGTTGAAGAAGAATTGTCCACCCTACCCCTAAGGAATCCATAGTTGTTGCCACGA GTTTACTCAGGCTTCAAAACGTGTATGGAACAAGGATCTTGGTAGAGCCCTTAGAGTTAGACAAGCATGAGATTCATGGA TACAAGGGCTCATCGACCATACTGCTGAATAATTTATAGGACACTTGATGGTATTTGGATTCTATGACGGGCGCTTGTGG AGCGTTAAAGACCCAAGAAGCACACATTTCACATGGAAGTGTGAGTTTACCATCAATAAAAGATGTTATGAAAATGTGCA TTAGGGTTAACAGACAATTCACTACTATGCTTATTTTATGTCAATGGCAACCCCTGGCACCATTACCATCAATTGTGCAA AGCAATAAACTATGACCATATGCATGTTTTCAACTCATGTTCATTGGTCCAAATATGAGTAATAAATTCAAAGGTTTCAC CATGAAGATCCATATTTAGCATACAAGAGAATGTAAACTCTCGATCTAATCCGTTGTGGTATTGACTCAACATTGCCTCA TTACAAGTGTGTTGACCCCCATTTCAATATAACTTTTATTTGATTTTACTAGTACATTGATTTCATCCTCCAAGAGTGGC CTAGTATATGGTTTGGACAACTAAGGCTGAAAATTGTTGGTTTATATTCAACCACATAAACATCAAGTTTAACCCAACAA GTAGATAGCTGAGTTCTTTAAGCATTTAGTCTAGAGTTTGATCTCAAAGCGATGTGCATGGAGAATGATTTATTGAGAGA AATTTACCCATTTAATGTGATCTCTGAGTTTTGAGTGAATCAGTCTTATGACCGCCGACTAGGTGATACCAAGTGAAAAA AATTCAATCAACTTTTATTATATATAAAGTGTGTAATAGTTATTTGAATAGTGTGCTTGTGCTTGCTATCAAAATGTGAA CCCATACAAACTTCATCACTCTTGTATACATAACTTTTCTTTGGTTTATGCTCCATAATTAAATTAACTAAGATAACTTA CCAACGAAAATCAATTGAGGAAACTAATTTTAGGATGATTGCATTAATTTCTCTTTTATCTAAATTAATTCTTAAACTCA ACACACAAAAAAAAATGAGTTAGAGAATAGTATACAATTATTTTTAATTACTTGAATTATTACCACCCTAACAGTTCTAC CAAATTCAAGTAGAATTACCGATACTTTGAAACAAAGTGAAGTGTGTGTTTGGTTTCTCGTTTGAGAATTTCACAATCAA TTTTTATAGAATTTTAATAGAGTAGAATTAATTTTAGATACAATGTAGAGGTTTAGAGTTATTT
CDS sequence (LotjaGi1g1v0649700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCCAAGCTGCTTTTGCAGAGAAGGCTCCTCAGGTTCTTGACACTGTCACCACCCTCATTACACTCCTCTTCTTC TGGTTACATTAATGGGGCACGGTTGCTTTCTCTGAAAGTATCAGAAATAGTGGGTCTCTTCAAGGGTAATGCACTTCTTT CTCCTTTTTCAACTTCTTCTAGAAGCTTCTGCTCTCGGGGTTCCAATCTTCTGGATGAGTCTGAAGTCCCCACGGCCGTT GATTACCGGTCTCTAATGGAGGAGAGTGAATACCACAGCCTGGCTGAGTCCACAATACATAACCTACAGGAAAAATTAGA GGACTATGGAGACTCTATTGACATAGATGGATTTGACATAGACTATGGGAATGATGTTTTGACTGTAAAACTTGGCGATC TGGGCACTTATGTATTGAACAAACAAACACCAAATAGACAGATTTGGCTGTCATCTCCAGTGAGTGGTCCATCAAGGTTT GATTGGGATCAGGATACTAAAGCTTGGATTTACAGGCGGAAGAAAGTAAACCTGTATAAGCTTTTAGAAGCCGAGTTGGA GCAGTTGTGTGGCAAACCTTTTGTTCTTTCCTGA
Protein sequence (LotjaGi1g1v0649700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAKLLLQRRLLRFLTLSPPSLHSSSSGYINGARLLSLKVSEIVGLFKGNALLSPFSTSSRSFCSRGSNLLDESEVPTAV DYRSLMEESEYHSLAESTIHNLQEKLEDYGDSIDIDGFDIDYGNDVLTVKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRF DWDQDTKAWIYRRKKVNLYKLLEAELEQLCGKPFVLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 12 | 12 | - | – | |
| PANTHER | 55 | 196 | 142 | 6.1E-66 | ||
| PANTHER | 55 | 196 | 142 | 6.1E-66 | – | |
| SUPERFAMILY | 77 | 193 | 117 | 5.41E-38 | ||
| Gene3D | 78 | 197 | 120 | 5.5E-41 | ||
| SMART | 86 | 197 | 112 | 1.2E-48 | ||
| PRINTS | 86 | 104 | 19 | 5.2E-11 | ||
| Pfam | 86 | 193 | 108 | 1.4E-36 | ||
| ProSiteProfiles | 86 | 194 | 109 | 28.889 | ||
| CDD | 86 | 193 | 108 | 1.34583E-40 | – | |
| TIGRFAM | 88 | 195 | 108 | 5.2E-25 | ||
| TIGRFAM | 90 | 187 | 98 | 6.1E-36 | ||
| PRINTS | 124 | 139 | 16 | 5.2E-11 | ||
| ProSitePatterns | 138 | 152 | 15 | - | ||
| PRINTS | 139 | 154 | 16 | 5.2E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ferroxidase activity | Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O. | ||
| Cellular component | Mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. | ||
| Molecular function | Ferric iron binding | Interacting selectively and non-covalently with ferric iron, Fe(III). | ||
| Biological process | Iron-sulfur cluster assembly | The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0649700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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