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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0652400 |
| Transcript ID | LotjaGi1g1v0652400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT2G40980.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6RET6|CCAMK_PEA Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase; TrEMBL-Plants: tr|K7KBX4|K7KBX4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0652400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121169753..121172112) extracted from Lotus japonicus Gifu genome v1.2.
CTCATGTTTGATCACTTGATCTCAGTTCCACAAAAGATATAGTTGTGGGCTTCCACATCTAGTTAGTAGTTACTTATAAG TGAATACACCATTTTTTTTTTCGTATGCTGAATTACTACTGTTAGTTATGCATTACTGTTTTTTTTATCTCTGTCTTTGG CTCATGTGAGAATTATGGATGTCTTTGTAACTTAAAACTAATGAAATCATGATTTTAATGTCCTCATAAAAATTGTAGTG ATATTAATGAACTGAAATACCTGTTTACAGGTAGATCCCCGGACCAGGAATCAATAGGGTCTGGGACAAAGAGGTCCAGT GCATCATCTGGTAGTAGGTCTCGGAATCAGAAGGAGTTCTTCTATAAATTTGTTGATAGTGACAACTTAACTGCAAAACT TGTAGACTGGTTTGAATCAGTGACAGAAAAAAGTGAACTGAAACAGCCTGCATTTGATGTTCCATTTGAGTTAATTGAAC TTCAAAAATTCGATTATGCATTGGAAGGGATTTCATTTCAGCAGCTGACCCGCATGCCTAATGCTGTTCATGCTTCTTCA TCTGATGCAGTGGAAGCAACAGCTTGTCTTGCTATTGAAGATTTCCTGCATGCTAGTATAAAGGGTTTGTGGGAGGCATT TTGGAATCAAGATGAGCCCATGCCTTTTTCTGTCGCTTGTCTGTATAATGCTAACATGAAATTTTATCAGGCTGAAACGG CTATTGCTAATGGAAGGCTCGGAGGTCTGTGTGCAACTGGTTTATTGCTCAATAATCCTAGACATCCTCATGGAAAATGG GATCATGTCCTTGAATTGGCACTTCTAAGGCCTGATATTAGAGGTCTTGCTTTTGGCAGTGACCGCCAGCCTTCTCCGTC CGTTCTAGGAGAAGCTCTATTTTATGCCATTCGAGTGCTATTGGCAAGGAGTTTGAGTAGACTTTCTTTCTTTCTGGATC CAAGCACAGTCTTTATTCTTATAGTTGATTCTCAATATGGGGGAGTTGTAAAAGTTGAAGGAGATGTAAATATGCTCAAT TTTGATGTGAATAATGTTTATGAATGTGCTGCTGAATGGGTAAAAAATCATTCTAGAATTTCTGTTTCTCCAATGTATAG GATCTGGAACAAACTTGGAAATGCAAACTGGGGAGATATTGGTTCTCTACAGATATTATTTGCAACCTTCCATTGTATTA TGCAATATGCAGGAATGCCCAAGAACTCTATTGAGGATTTAGCTGCTGATCATAGTTCACGCCTCCAAGCAAGAAGAATA GAGAGACACTTAGGAGATGCCACAGTGAACGAAAATGGCCTATTTAGATACCAGCAACGCAGTGTTTCCCCTGAAATCGT TGAAGTTCAGGATGACCCTGTCAAAATTGATTCCAAGGAGTCAATGAAATTAGAAGAAGGATCCATGCTATGGCTGGAGG ATTCAGATTGGCAAAAGGGTTATCAGATAAAAGAAGTAATCAATACTGGTGAATTCACATACTATATTGCATCTAATGTT GAAGACCCTGGAAAAAATCTATTTCTATATGTTGGCTCTCATCCCTCCCAGCTGGAGCCAGCATGGGAAGATATGAATTT ATGGTATCAGGTTCAGAGGCAGACCAAAGTATTGACAATAATGAAGCAGAAAGGTCTCTCATGTAAATATCTGCCTCAAT TGAGTGCATCTGGTAGGATCATACACCCTGGTCATTGTCGAAGACCGAGCTCAGGTGGAAATTGTGACCACCCTTGGTGT GGGACCCCTGTTCTTGTGACCAGTCCTGTTGGTGAAACAGTAGCTGAAATGGTACGCACGGGCCAATTTGGTCCAGACGA GGCTATCAAATGTTGCCATGATTGCTTATCAGCACTTTCAGCTGCATCCTCTGCTGGAATTCGACATGGAGACATCAGGC CGGAGAATGTGATCTGCGTTAAGTCTGGTGTGAGGCACCCTTATTTTGTTCTAATCGGGTGGGGCCATGCTATTCTTGAA GATAGAGACCGCCCTGCCATGAATCTTCATTTCTCATCTACTTACGCGCTTCAGGAAGGAAAGCTATGCTCTGCCTCAGA TGCAGAAAGCCTAGTTTATATGCTTTATTTTTCATGTGGTGGAGGTTTTCCTGACCTAGATTCAGTAGAGGGAGCGCTAC AATGGAGAGAGACATCTTGGTCAAGGAGATCAATTCAGCAGAAGCTTGGTGATATCTCCACTGTGCTGAAAGCTTTCGCA GATTATGTTGACAGTCTATGCGGGACACCATATCCCATGGACTACGAAATATGGTTGAGAAGGTTAAGGCGAAATATTCA TGAAGAAGATCATGGAAAGGAAATTGTTGCAGCAAGCTAG
CDS sequence (LotjaGi1g1v0652400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTAATGCTGTTCATGCTTCTTCATCTGATGCAGTGGAAGCAACAGCTTGTCTTGCTATTGAAGATTTCCTGCATGC TAGTATAAAGGGTTTGTGGGAGGCATTTTGGAATCAAGATGAGCCCATGCCTTTTTCTGTCGCTTGTCTGTATAATGCTA ACATGAAATTTTATCAGGCTGAAACGGCTATTGCTAATGGAAGGCTCGGAGGTCTGTGTGCAACTGGTTTATTGCTCAAT AATCCTAGACATCCTCATGGAAAATGGGATCATGTCCTTGAATTGGCACTTCTAAGGCCTGATATTAGAGGTCTTGCTTT TGGCAGTGACCGCCAGCCTTCTCCGTCCGTTCTAGGAGAAGCTCTATTTTATGCCATTCGAGTGCTATTGGCAAGGAGTT TGAGTAGACTTTCTTTCTTTCTGGATCCAAGCACAGTCTTTATTCTTATAGTTGATTCTCAATATGGGGGAGTTGTAAAA GTTGAAGGAGATGTAAATATGCTCAATTTTGATGTGAATAATGTTTATGAATGTGCTGCTGAATGGGTAAAAAATCATTC TAGAATTTCTGTTTCTCCAATGTATAGGATCTGGAACAAACTTGGAAATGCAAACTGGGGAGATATTGGTTCTCTACAGA TATTATTTGCAACCTTCCATTGTATTATGCAATATGCAGGAATGCCCAAGAACTCTATTGAGGATTTAGCTGCTGATCAT AGTTCACGCCTCCAAGCAAGAAGAATAGAGAGACACTTAGGAGATGCCACAGTGAACGAAAATGGCCTATTTAGATACCA GCAACGCAGTGTTTCCCCTGAAATCGTTGAAGTTCAGGATGACCCTGTCAAAATTGATTCCAAGGAGTCAATGAAATTAG AAGAAGGATCCATGCTATGGCTGGAGGATTCAGATTGGCAAAAGGGTTATCAGATAAAAGAAGTAATCAATACTGGTGAA TTCACATACTATATTGCATCTAATGTTGAAGACCCTGGAAAAAATCTATTTCTATATGTTGGCTCTCATCCCTCCCAGCT GGAGCCAGCATGGGAAGATATGAATTTATGGTATCAGGTTCAGAGGCAGACCAAAGTATTGACAATAATGAAGCAGAAAG GTCTCTCATGTAAATATCTGCCTCAATTGAGTGCATCTGGTAGGATCATACACCCTGGTCATTGTCGAAGACCGAGCTCA GGTGGAAATTGTGACCACCCTTGGTGTGGGACCCCTGTTCTTGTGACCAGTCCTGTTGGTGAAACAGTAGCTGAAATGGT ACGCACGGGCCAATTTGGTCCAGACGAGGCTATCAAATGTTGCCATGATTGCTTATCAGCACTTTCAGCTGCATCCTCTG CTGGAATTCGACATGGAGACATCAGGCCGGAGAATGTGATCTGCGTTAAGTCTGGTGTGAGGCACCCTTATTTTGTTCTA ATCGGGTGGGGCCATGCTATTCTTGAAGATAGAGACCGCCCTGCCATGAATCTTCATTTCTCATCTACTTACGCGCTTCA GGAAGGAAAGCTATGCTCTGCCTCAGATGCAGAAAGCCTAGTTTATATGCTTTATTTTTCATGTGGTGGAGGTTTTCCTG ACCTAGATTCAGTAGAGGGAGCGCTACAATGGAGAGAGACATCTTGGTCAAGGAGATCAATTCAGCAGAAGCTTGGTGAT ATCTCCACTGTGCTGAAAGCTTTCGCAGATTATGTTGACAGTCTATGCGGGACACCATATCCCATGGACTACGAAATATG GTTGAGAAGGTTAAGGCGAAATATTCATGAAGAAGATCATGGAAAGGAAATTGTTGCAGCAAGCTAG
Protein sequence (LotjaGi1g1v0652400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPNAVHASSSDAVEATACLAIEDFLHASIKGLWEAFWNQDEPMPFSVACLYNANMKFYQAETAIANGRLGGLCATGLLLN NPRHPHGKWDHVLELALLRPDIRGLAFGSDRQPSPSVLGEALFYAIRVLLARSLSRLSFFLDPSTVFILIVDSQYGGVVK VEGDVNMLNFDVNNVYECAAEWVKNHSRISVSPMYRIWNKLGNANWGDIGSLQILFATFHCIMQYAGMPKNSIEDLAADH SSRLQARRIERHLGDATVNENGLFRYQQRSVSPEIVEVQDDPVKIDSKESMKLEEGSMLWLEDSDWQKGYQIKEVINTGE FTYYIASNVEDPGKNLFLYVGSHPSQLEPAWEDMNLWYQVQRQTKVLTIMKQKGLSCKYLPQLSASGRIIHPGHCRRPSS GGNCDHPWCGTPVLVTSPVGETVAEMVRTGQFGPDEAIKCCHDCLSALSAASSAGIRHGDIRPENVICVKSGVRHPYFVL IGWGHAILEDRDRPAMNLHFSSTYALQEGKLCSASDAESLVYMLYFSCGGGFPDLDSVEGALQWRETSWSRRSIQQKLGD ISTVLKAFADYVDSLCGTPYPMDYEIWLRRLRRNIHEEDHGKEIVAAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 607 | 607 | 0.0 | – | |
| PANTHER | 1 | 607 | 607 | 0.0 | – | |
| Gene3D | 279 | 603 | 325 | 1.2E-11 | – | |
| SUPERFAMILY | 308 | 595 | 288 | 1.42E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0652400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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