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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0653100 |
| Transcript ID | LotjaGi1g1v0653100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger-like protein, putative; TAIR: AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q39262|ZFP3_ARATH Zinc finger protein 3; TrEMBL-Plants: tr|K7KYF2|K7KYF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0653100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121241258..121247498) extracted from Lotus japonicus Gifu genome v1.2.
AAATTTGAATTGAGGAAATGACCGTTGTACTGTTTCATTTCCACATCAATAAACGAGTGAATTACCAATAAAAAAAAATT CTATATGCTGAGGAATGTCTTGAAGTTGAAACAGACACCCCTAACTTTGTATGTGTTTAGTTTAAAAAAACATTTTATAT TTTAAAAACAGTTTTCAGTAGTTTTTAATTTTAATTTTAATTTTTTAAAATTTTGAAAACATGTTTATTTTATTTTAACT GTTATTGGCTTATTGCCATGGTTGTTGTCGCCACCTCACTACTGTCACCACCGCCGCCGCCACCACCACCACCACCGCCA GAGTCACTGCCAACACAATTTTCATTCGCTCTACCTCTCGGTAACCCCCTACTTCAAATCACCATTGTTGCCCGTTCTCA TTTTGTTTTCCTTGCTCTCACTCTCAGTCGTTCGCGCTCTTGCGTCTCAAACAGTTGAATTTCGTTGCAGGTTTCCATAC AAGCTTCGTGCAGCATTCTGATGGTGCTCGTAGGACGAAACTCGATGTCAGAGAACTGGCGAATTGCGTTCGAATTATCC CTTTTGTTCGTGACCTCAAGCTGTGAGTTCCATTTTCAACTCACAATTTCACACCACTCACAACGTGTTTGATATAATGC CTCTGAGAATACATGGTTACTCTGTTTATTTGCAGTTACAAGCGTTGTTTTGTTTTGTTCATAATTGCCTCCCTCATAAA GAATAAAGAATTCAAAGAAAAGTACAATTTTATTGAATGAATGAAACTGAATGGAAGAGAAAGATCTACCTTGTTCAAAC CAGAAAAACTCAAACATGGTGAAGAATGTAATGCATTATTCAGATTCTTAGGTAAAGATGATACAAGTATATAATTTTTG CCTTTATACTACATCTCTACAGAGTAACTCTGTTGCAACTAACTATCTAACCATGGTTTACAATCAGTGACAACTGGTTA CAATTCACAGCTAACAGAACTTAACTAACTAGTTCACTTAGTTAGAGAACTTAAGTACCCGTTTGGATGCAAACCTAAGA GAACTCATTAGAGCTTATTTAGTGCATTTTCTAATAGATAAGCTCCAATAAGCTCTAATAAGCCCGTATCAAGAACTAAC TGGATAACACTTATAAGTCATGATGTTTGAATTCTTTTTATTCTGCAGTTGTGGTTGTTTCCAAGACTGTTACAACTGCT GAAACCATGTTGGTTGCTCGAATAATCAGCGAATGGATTCCATATGGTCTAGGGTAAGTGAAGTATTAACACTATTCATT CAAGAATAGTAGCATAATCACTGTTTTTTGATTTCTAGTATTATATGCATCATACCCCCAACCTCCTATTGGCTTCTTCA AAATATATTTCTAGTTTATGTGAAAGGGAAATACCAAGTGGATTTACAATATTCTGAGGACTGGTTTATGATTCAATTTT ACCTCAGGCCCTCAGCAGTTGCAAAACATATGCTGGCAGTCAGCACTAATCTCGTGGTATAGCCATATGTTGTTTTCTCT TTTGCATTTGCTCATCAAGCTCTATTAAAAATTTCTTTGTTTGGCTTCTGATTTTCTGTATATATGTATATATCAGTTAC TTAATCTACTTATCTTTTCCTATTGTCTTTATTTCTGGTGCAGCTTGTGGAAAAGTTTGACATTGATCCTAATAAGGCTT TTGCATTTGGGGACTGGTTGGTGGCCAATATAGTGGTCAATTTTTATTTATTTAATAAGAGTAGTAATTTGAATTATCGG AGATATTTGATTTTATTTGTTTTCTGATATGCTGCTTACAGCCTGCTGAGCTGTTGGAGTGCTGCCATTTTCCCTGCAAT ATGGTTTTTCATTAATTGAGAAGTATGTGATCTATTATTCTAATGCAGACACTTCTTTTGGTGGATAATGGTCGTAGTTG TCCCTTAAGTTGTTCTGTTTTAAGTCTATTGTTGGCATTTATTGTCTAATGAACTCATTGCATCAGACTTATATTCTGCT TCGCTTTCATTTTTAAATTAAGAAATAGAAAAAAAAAGGAACGCTATCTCATAGGTGACATTATGGATATAGAAATGAAT TCTTTTTGTGCATATGCTCTTTCAAACTTCTTGATTTATAAAAGAAAAGGATACTAATGTCCCTGAATCTCTGCATTCAG TTAGTATGGTTCTAAAATATGACCAAGCCTTGTTCAAACTTCATATTGTAATAACAGATAGATGGTAATTCATGTATAAT GCCTCCAATCTCCAATACACACACATATATGTATATATTTGTTTCATGTCATGTGATTAGCAGAAGGAGAATGTGGTATT CTCGTGGGTAGTTACTATTCCAAGACAGTAAAGAATCACCCATCCATTTATTTTATTCATTTATTTACCTATTTAGCTAT TTTGGTGCTATTTGATAGACAGAGTACCCTTCTTGTATGTATGCTTGGCTTGCATATGATGTTGTATTGCTTTTGTGAAG GTTTTTAAAGGGAGCCTCAAGCATTGATCAACATATGTATGCAGAACCATTTGAAAGAAATTTACCTGTAAGAGCCACTG TATACTAATCCTTTTGTCCTTCAGTTTTGCAATTGTGGATCTCCAGCATCTACTTCCTCATATTTTGATTTCTATGAATT TCTTTCTTTGCATGCTACACCAAGTTTAAGCCATTTATTTTGCAACCAACTCACCGACATGCCAAAAACTTAAGATATTA GGTGGAGATACACGAATATTTTTATTGTAACAACAATGAACTCTTAATAGTAGAGTCCAGCATCATCGATTTTCCTATGT AACCAAAAAAAGAGTCCAGCATCAGTTAGGAGAAAGAAATATTATGTGAGTTCTCTCTCTTAATAACACTTACTATTTAT TAACACTTCTATCTCCAATATTTTCTTTTCCTCATGATCTCCTTTATGCCCACTCCCTCCCTCCCTCCCTCCCTCTCTCT CTCTCTCTCTCTTTTTCTCTCCCCACATATTGCTTGCTCACCCTTGGTTGATGAATAATTCTTCCAATCCAGAAGTGATA TTGGCTTTCATGGTCTGAAAACCACTCCCTCCTTTGAAGCAATAAACTTCTTTTGTAGTTGGAGAATGAGTAGTGAGTAT TCACACCAACAAGGATTATACATCTATTTATTTGGCATTAGAATGTTTCTCTAACTGCATGATGACACATTCAATAACAT TGTGTCAGTGCACCAGGTGCTTCTGGGACTGTTCAGTGCTTGGAATGTCTCATTTCTTGGATATCCTGCCTGAGTGAGTA CCTAATTGTTGTTCTAGTGAATTTCTTATATGTTTATTCTTAACCAATAATTTTCAAGAACTGAAACTTCTGCTGCAATC CAGGCTGTCCTACCTTATTCTCAAGCTCTGGAGAAGTTTGCCCCACATATTCAACAGGTATTTTTGTTACTGCGTCATGA ATGAAGTATCAGGCACTTGTTAATCTATTTTTCTCTGTTCATATAACGTATGTTTTAAATTATGTAGCATCCTTCTCTAA GGCAGTGAGACACTGTAGTGAAAAATTGAGATTCTATGTTGACATATGTTGAGAAGTCTCACATTGACTAGAGATATGGC TAAGATAGCTCATATATAGGAAGACAATCCTGATCTTTTAATTAAATTTTAGGTTAGACCTCCCAAACTCTAATATAGTA TCAAAGTTTATCCTAGAGTGACATGATAGGTTTTGAGAAGTCTCACATTGACTACAGATGTTACCAGCCCTTATATATGA AAAGACAATTCTCATCTCTAGGATAACTTTGGGGTAGAGTTAGACCTCCCAAATTCTAATAACATGGCAGTTCTAGAGTG TATTTTCATGCTTTCGTTTGACTAGTTAATTTGAGGGTTATAATCTGTCATACATGTTTTTTTTTACAATCCCTTGAGCA ATTACAGAAGGACAATGGTCCTCCACGTCCCATTCTGTTTCTTTACTGCTCTTTTAGTTATAGAATCTGTGATCTCCTTT CCTTTGAGGGCTATCTACTTATTTTATGATTAGTCCCCGAGGGTTAGCTCAAGTGGTAAGAGTTAGGGGACATAAGGGTT GGGTGGGATGAAGGGTGAAGGGTCCAGGGTAGGAGTGACTAATTTACTTTTTTTTTTGACAAAGACTAATGTACTAACAA CTAACATTTTGTCTAAAAAAAAAACTTATTTTATATGATTAGTAATTAGAAATGAAATAATTAATTTCTGTTATATGAAT ATTTCAATATCTTCTTTCTATTACCTTTGAGGTCTATCTACTTATTTTATGATTAGTAATTAGAAATGAAATAATTATTT TCTGTTCAAGGAATATGAATATTTCAATATTTTCTTTCTATTGATATTGACTATTGACTATTGACTTGTCGAACAAGAAA TTATCCTTCTCTTCTATAACCTCAAATATCACCCGTTCTATTATACTAGGATAGGTTTACAGATTTTTCAATCAAAAGCT GCTGCAATGAGATCCTGCGGTGATGCTATTGCTACAATCAATTCCCGCCTTTCAAAAAAGGTATTTCTTATTGGGCTTTG ACTGTTATTAATTATTATTAGTATATATTGCTTTAATGGTTATTTGCCATAATTTTATAGGTAGCAACAGAATAGGAAAC TCCTTGATTCAGTTACCAGTCCAAATTGACAATCATGTTATGTTAATGACTTCCAATTATATTTAATTCAGAATTTGAAC TACATACAAAGTCTGATACACTAACACCGCTTACATCCAATTAATATTATTTACTGCATTAGAGTTAAAACCATTTTGGG AATGTTTGTTTAGGCAAAGATCATGCAATAATCGGTGCCAGCTTAGTCACCTTGTTTCAATCCTTTGCCATGATAATTCA AATTCAAATAAATAACATAATATCAAATGCCTGAGATTCTTTCCTTATTCGTGAGATATGATCTTATTAATACAAATCTT CAATGAATAACATTGCTCATACCCCTCTTTTCATCAATCAAACCCACTCCAAACTCATCTCTTCATCACTTCTTCTCCTG TGTACCATGGCAGCCTCCGAAGGTTCTAGCATCTCTGCCACCTCAGAAGGAGGCGTCCGAAATGAAGACAACAACAACAA CAACAAGGTGCTGAAAATGAAGGAGAAGGAAGACGAGGAGGGTTCCAACGGATCAAGTTCCCAGAATGTTCTTGATTTCG TGAATCTCTCCAAAGATGATTCTGTTTGTGGGTCGGTGCAAGAGCTTGATTTTTTCAACTTGGGGAAAACCGCGGTGGGT TCATCATCATCAAGCCGGGCTAATAACAATGACATCAACGACGGTGAAGGCAGAGACGAGGAGAAAACCTCTGAATCGAA GACTTTCTCTTGTAACTTTTGCAAGAGGCAGTTTTCTTCGTCACAAGCCCTCGGAGGACATCAGAATGCCCACAAGCCTG AACGCGCACTTGCAAAGCGTAGACAAGAGCTTCACAACGCTGGTGCTTTTTGCCACCCTCATTTTCCTTATTACACTTAT CCTAGTCTCTCAACATCCCCTTATTATGGATCTTATAGCAAAGCACTTGGGATTAGGAGGGATTCCATGATTCACAAGCC AGCCTATCCTCTCACCCCACCTGGCTTCAGGTTTGGTCAAGGTGCTTCTGCTTGGTCATCAATGCAAGACATGTTGAACA TTTCTTCTCTTGATAGATTGAGGATGGGTCCTGGTTTGAATCCAAATATTGGAGTTGGGATTCTAGGAAATGGAGGTTCA ATTAGTGCACCACCACCTTTGAAGGTAGAAGATGAGGGTAGTAGAACTGCTGGAACCACTCTCCAATTTGGAGAATCTTC TGCAAATGCTGCTGCAAGGTCAAACACAACCCTGGACAAGTCAACTCTGGTTACCACTGGTGAACATCATCAGTCCAACG TTGAAGAACCTGACCCTTCTGGGCTTGATTTGTCTCTTAAACTTTAAAGTTATTAACTGTTATCAATTTTCTTTGTGATT GCTACACTCCAGTTTGAGTTTTTGCGTATTTTATGTTTTTTTATTAGCTGTCAAATTCTATAATTTGAAATGCCATTTTT AGAGTTAATCGCAGGCATATTTTGTTTCCCTTTTCCCCTTATATAGATGGCTGATATGATATTTTTATTTAGGGAAATTT GTGAGCTTTGGTATCCTTTAAAACTATATTGAGATGTAAATTTGGTATATTGAATAAAGGGTAATGGTTTTCATTCTGCA G
CDS sequence (LotjaGi1g1v0653100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGAGAAGGAAGACGAGGAGGGTTCCAACGGATCAAGTTCCCAGAATGTTCTTGATTTCGTGAATCTCTCCAAAGA TGATTCTGTTTGTGGGTCGGTGCAAGAGCTTGATTTTTTCAACTTGGGGAAAACCGCGGTGGGTTCATCATCATCAAGCC GGGCTAATAACAATGACATCAACGACGGTGAAGGCAGAGACGAGGAGAAAACCTCTGAATCGAAGACTTTCTCTTGTAAC TTTTGCAAGAGGCAGTTTTCTTCGTCACAAGCCCTCGGAGGACATCAGAATGCCCACAAGCCTGAACGCGCACTTGCAAA GCGTAGACAAGAGCTTCACAACGCTGGTGCTTTTTGCCACCCTCATTTTCCTTATTACACTTATCCTAGTCTCTCAACAT CCCCTTATTATGGATCTTATAGCAAAGCACTTGGGATTAGGAGGGATTCCATGATTCACAAGCCAGCCTATCCTCTCACC CCACCTGGCTTCAGGTTTGGTCAAGGTGCTTCTGCTTGGTCATCAATGCAAGACATGTTGAACATTTCTTCTCTTGATAG ATTGAGGATGGGTCCTGGTTTGAATCCAAATATTGGAGTTGGGATTCTAGGAAATGGAGGTTCAATTAGTGCACCACCAC CTTTGAAGGTAGAAGATGAGGGTAGTAGAACTGCTGGAACCACTCTCCAATTTGGAGAATCTTCTGCAAATGCTGCTGCA AGGTCAAACACAACCCTGGACAAGTCAACTCTGGTTACCACTGGTGAACATCATCAGTCCAACGTTGAAGAACCTGACCC TTCTGGGCTTGATTTGTCTCTTAAACTTTAA
Protein sequence (LotjaGi1g1v0653100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKEKEDEEGSNGSSSQNVLDFVNLSKDDSVCGSVQELDFFNLGKTAVGSSSSSRANNNDINDGEGRDEEKTSESKTFSCN FCKRQFSSSQALGGHQNAHKPERALAKRRQELHNAGAFCHPHFPYYTYPSLSTSPYYGSYSKALGIRRDSMIHKPAYPLT PPGFRFGQGASAWSSMQDMLNISSLDRLRMGPGLNPNIGVGILGNGGSISAPPPLKVEDEGSRTAGTTLQFGESSANAAA RSNTTLDKSTLVTTGEHHQSNVEEPDPSGLDLSLKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 276 | 275 | 9.7E-64 | – | |
| PANTHER | 2 | 276 | 275 | 9.7E-64 | – | |
| MobiDBLite | 45 | 72 | 28 | - | – | |
| MobiDBLite | 45 | 59 | 15 | - | – | |
| Gene3D | 54 | 118 | 65 | 1.2E-7 | – | |
| SUPERFAMILY | 74 | 104 | 31 | 1.78E-6 | ||
| Pfam | 77 | 100 | 24 | 3.0E-5 | – | |
| ProSiteProfiles | 77 | 104 | 28 | 11.489 | ||
| ProSitePatterns | 79 | 99 | 21 | - | ||
| MobiDBLite | 251 | 276 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi1g1v0653100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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