Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0653100 |
| Transcript ID | LotjaGi1g1v0653100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger-like protein, putative; TAIR: AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q39262|ZFP3_ARATH Zinc finger protein 3; TrEMBL-Plants: tr|K7KYF2|K7KYF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0653100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121241477..121247441) extracted from Lotus japonicus Gifu genome v1.2.
CATGTTTATTTTATTTTAACTGTTATTGGCTTATTGCCATGGTTGTTGTCGCCACCTCACTACTGTCACCACCGCCGCCG CCACCACCACCACCACCGCCAGAGTCACTGCCAACACAATTTTCATTCGCTCTACCTCTCGGTAACCCCCTACTTCAAAT CACCATTGTTGCCCGTTCTCATTTTGTTTTCCTTGCTCTCACTCTCAGTCGTTCGCGCTCTTGCGTCTCAAACAGTTGAA TTTCGTTGCAGGTTTCCATACAAGCTTCGTGCAGCATTCTGATGGTGCTCGTAGGACGAAACTCGATGTCAGAGAACTGG CGAATTGCGTTCGAATTATCCCTTTTGTTCGTGACCTCAAGCTGTGAGTTCCATTTTCAACTCACAATTTCACACCACTC ACAACGTGTTTGATATAATGCCTCTGAGAATACATGGTTACTCTGTTTATTTGCAGTTACAAGCGTTGTTTTGTTTTGTT CATAATTGCCTCCCTCATAAAGAATAAAGAATTCAAAGAAAAGTACAATTTTATTGAATGAATGAAACTGAATGGAAGAG AAAGATCTACCTTGTTCAAACCAGAAAAACTCAAACATGGTGAAGAATGTAATGCATTATTCAGATTCTTAGGTAAAGAT GATACAAGTATATAATTTTTGCCTTTATACTACATCTCTACAGAGTAACTCTGTTGCAACTAACTATCTAACCATGGTTT ACAATCAGTGACAACTGGTTACAATTCACAGCTAACAGAACTTAACTAACTAGTTCACTTAGTTAGAGAACTTAAGTACC CGTTTGGATGCAAACCTAAGAGAACTCATTAGAGCTTATTTAGTGCATTTTCTAATAGATAAGCTCCAATAAGCTCTAAT AAGCCCGTATCAAGAACTAACTGGATAACACTTATAAGTCATGATGTTTGAATTCTTTTTATTCTGCAGTTGTGGTTGTT TCCAAGACTGTTACAACTGCTGAAACCATGTTGGTTGCTCGAATAATCAGCGAATGGATTCCATATGGTCTAGGGTAAGT GAAGTATTAACACTATTCATTCAAGAATAGTAGCATAATCACTGTTTTTTGATTTCTAGTATTATATGCATCATACCCCC AACCTCCTATTGGCTTCTTCAAAATATATTTCTAGTTTATGTGAAAGGGAAATACCAAGTGGATTTACAATATTCTGAGG ACTGGTTTATGATTCAATTTTACCTCAGGCCCTCAGCAGTTGCAAAACATATGCTGGCAGTCAGCACTAATCTCGTGGTA TAGCCATATGTTGTTTTCTCTTTTGCATTTGCTCATCAAGCTCTATTAAAAATTTCTTTGTTTGGCTTCTGATTTTCTGT ATATATGTATATATCAGTTACTTAATCTACTTATCTTTTCCTATTGTCTTTATTTCTGGTGCAGCTTGTGGAAAAGTTTG ACATTGATCCTAATAAGGCTTTTGCATTTGGGGACTGGTTGGTGGCCAATATAGTGGTCAATTTTTATTTATTTAATAAG AGTAGTAATTTGAATTATCGGAGATATTTGATTTTATTTGTTTTCTGATATGCTGCTTACAGCCTGCTGAGCTGTTGGAG TGCTGCCATTTTCCCTGCAATATGGTTTTTCATTAATTGAGAAGTATGTGATCTATTATTCTAATGCAGACACTTCTTTT GGTGGATAATGGTCGTAGTTGTCCCTTAAGTTGTTCTGTTTTAAGTCTATTGTTGGCATTTATTGTCTAATGAACTCATT GCATCAGACTTATATTCTGCTTCGCTTTCATTTTTAAATTAAGAAATAGAAAAAAAAAGGAACGCTATCTCATAGGTGAC ATTATGGATATAGAAATGAATTCTTTTTGTGCATATGCTCTTTCAAACTTCTTGATTTATAAAAGAAAAGGATACTAATG TCCCTGAATCTCTGCATTCAGTTAGTATGGTTCTAAAATATGACCAAGCCTTGTTCAAACTTCATATTGTAATAACAGAT AGATGGTAATTCATGTATAATGCCTCCAATCTCCAATACACACACATATATGTATATATTTGTTTCATGTCATGTGATTA GCAGAAGGAGAATGTGGTATTCTCGTGGGTAGTTACTATTCCAAGACAGTAAAGAATCACCCATCCATTTATTTTATTCA TTTATTTACCTATTTAGCTATTTTGGTGCTATTTGATAGACAGAGTACCCTTCTTGTATGTATGCTTGGCTTGCATATGA TGTTGTATTGCTTTTGTGAAGGTTTTTAAAGGGAGCCTCAAGCATTGATCAACATATGTATGCAGAACCATTTGAAAGAA ATTTACCTGTAAGAGCCACTGTATACTAATCCTTTTGTCCTTCAGTTTTGCAATTGTGGATCTCCAGCATCTACTTCCTC ATATTTTGATTTCTATGAATTTCTTTCTTTGCATGCTACACCAAGTTTAAGCCATTTATTTTGCAACCAACTCACCGACA TGCCAAAAACTTAAGATATTAGGTGGAGATACACGAATATTTTTATTGTAACAACAATGAACTCTTAATAGTAGAGTCCA GCATCATCGATTTTCCTATGTAACCAAAAAAAGAGTCCAGCATCAGTTAGGAGAAAGAAATATTATGTGAGTTCTCTCTC TTAATAACACTTACTATTTATTAACACTTCTATCTCCAATATTTTCTTTTCCTCATGATCTCCTTTATGCCCACTCCCTC CCTCCCTCCCTCCCTCTCTCTCTCTCTCTCTCTTTTTCTCTCCCCACATATTGCTTGCTCACCCTTGGTTGATGAATAAT TCTTCCAATCCAGAAGTGATATTGGCTTTCATGGTCTGAAAACCACTCCCTCCTTTGAAGCAATAAACTTCTTTTGTAGT TGGAGAATGAGTAGTGAGTATTCACACCAACAAGGATTATACATCTATTTATTTGGCATTAGAATGTTTCTCTAACTGCA TGATGACACATTCAATAACATTGTGTCAGTGCACCAGGTGCTTCTGGGACTGTTCAGTGCTTGGAATGTCTCATTTCTTG GATATCCTGCCTGAGTGAGTACCTAATTGTTGTTCTAGTGAATTTCTTATATGTTTATTCTTAACCAATAATTTTCAAGA ACTGAAACTTCTGCTGCAATCCAGGCTGTCCTACCTTATTCTCAAGCTCTGGAGAAGTTTGCCCCACATATTCAACAGGT ATTTTTGTTACTGCGTCATGAATGAAGTATCAGGCACTTGTTAATCTATTTTTCTCTGTTCATATAACGTATGTTTTAAA TTATGTAGCATCCTTCTCTAAGGCAGTGAGACACTGTAGTGAAAAATTGAGATTCTATGTTGACATATGTTGAGAAGTCT CACATTGACTAGAGATATGGCTAAGATAGCTCATATATAGGAAGACAATCCTGATCTTTTAATTAAATTTTAGGTTAGAC CTCCCAAACTCTAATATAGTATCAAAGTTTATCCTAGAGTGACATGATAGGTTTTGAGAAGTCTCACATTGACTACAGAT GTTACCAGCCCTTATATATGAAAAGACAATTCTCATCTCTAGGATAACTTTGGGGTAGAGTTAGACCTCCCAAATTCTAA TAACATGGCAGTTCTAGAGTGTATTTTCATGCTTTCGTTTGACTAGTTAATTTGAGGGTTATAATCTGTCATACATGTTT TTTTTTACAATCCCTTGAGCAATTACAGAAGGACAATGGTCCTCCACGTCCCATTCTGTTTCTTTACTGCTCTTTTAGTT ATAGAATCTGTGATCTCCTTTCCTTTGAGGGCTATCTACTTATTTTATGATTAGTCCCCGAGGGTTAGCTCAAGTGGTAA GAGTTAGGGGACATAAGGGTTGGGTGGGATGAAGGGTGAAGGGTCCAGGGTAGGAGTGACTAATTTACTTTTTTTTTTGA CAAAGACTAATGTACTAACAACTAACATTTTGTCTAAAAAAAAAACTTATTTTATATGATTAGTAATTAGAAATGAAATA ATTAATTTCTGTTATATGAATATTTCAATATCTTCTTTCTATTACCTTTGAGGTCTATCTACTTATTTTATGATTAGTAA TTAGAAATGAAATAATTATTTTCTGTTCAAGGAATATGAATATTTCAATATTTTCTTTCTATTGATATTGACTATTGACT ATTGACTTGTCGAACAAGAAATTATCCTTCTCTTCTATAACCTCAAATATCACCCGTTCTATTATACTAGGATAGGTTTA CAGATTTTTCAATCAAAAGCTGCTGCAATGAGATCCTGCGGTGATGCTATTGCTACAATCAATTCCCGCCTTTCAAAAAA GGTATTTCTTATTGGGCTTTGACTGTTATTAATTATTATTAGTATATATTGCTTTAATGGTTATTTGCCATAATTTTATA GGTAGCAACAGAATAGGAAACTCCTTGATTCAGTTACCAGTCCAAATTGACAATCATGTTATGTTAATGACTTCCAATTA TATTTAATTCAGAATTTGAACTACATACAAAGTCTGATACACTAACACCGCTTACATCCAATTAATATTATTTACTGCAT TAGAGTTAAAACCATTTTGGGAATGTTTGTTTAGGCAAAGATCATGCAATAATCGGTGCCAGCTTAGTCACCTTGTTTCA ATCCTTTGCCATGATAATTCAAATTCAAATAAATAACATAATATCAAATGCCTGAGATTCTTTCCTTATTCGTGAGATAT GATCTTATTAATACAAATCTTCAATGAATAACATTGCTCATACCCCTCTTTTCATCAATCAAACCCACTCCAAACTCATC TCTTCATCACTTCTTCTCCTGTGTACCATGGCAGCCTCCGAAGGTTCTAGCATCTCTGCCACCTCAGAAGGAGGCGTCCG AAATGAAGACAACAACAACAACAACAAGGTGCTGAAAATGAAGGAGAAGGAAGACGAGGAGGGTTCCAACGGATCAAGTT CCCAGAATGTTCTTGATTTCGTGAATCTCTCCAAAGATGATTCTGTTTGTGGGTCGGTGCAAGAGCTTGATTTTTTCAAC TTGGGGAAAACCGCGGTGGGTTCATCATCATCAAGCCGGGCTAATAACAATGACATCAACGACGGTGAAGGCAGAGACGA GGAGAAAACCTCTGAATCGAAGACTTTCTCTTGTAACTTTTGCAAGAGGCAGTTTTCTTCGTCACAAGCCCTCGGAGGAC ATCAGAATGCCCACAAGCCTGAACGCGCACTTGCAAAGCGTAGACAAGAGCTTCACAACGCTGGTGCTTTTTGCCACCCT CATTTTCCTTATTACACTTATCCTAGTCTCTCAACATCCCCTTATTATGGATCTTATAGCAAAGCACTTGGGATTAGGAG GGATTCCATGATTCACAAGCCAGCCTATCCTCTCACCCCACCTGGCTTCAGGTTTGGTCAAGGTGCTTCTGCTTGGTCAT CAATGCAAGACATGTTGAACATTTCTTCTCTTGATAGATTGAGGATGGGTCCTGGTTTGAATCCAAATATTGGAGTTGGG ATTCTAGGAAATGGAGGTTCAATTAGTGCACCACCACCTTTGAAGGTAGAAGATGAGGGTAGTAGAACTGCTGGAACCAC TCTCCAATTTGGAGAATCTTCTGCAAATGCTGCTGCAAGGTCAAACACAACCCTGGACAAGTCAACTCTGGTTACCACTG GTGAACATCATCAGTCCAACGTTGAAGAACCTGACCCTTCTGGGCTTGATTTGTCTCTTAAACTTTAAAGTTATTAACTG TTATCAATTTTCTTTGTGATTGCTACACTCCAGTTTGAGTTTTTGCGTATTTTATGTTTTTTTATTAGCTGTCAAATTCT ATAATTTGAAATGCCATTTTTAGAGTTAATCGCAGGCATATTTTGTTTCCCTTTTCCCCTTATATAGATGGCTGATATGA TATTTTTATTTAGGGAAATTTGTGAGCTTTGGTATCCTTTAAAAC
CDS sequence (LotjaGi1g1v0653100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGAGAAGGAAGACGAGGAGGGTTCCAACGGATCAAGTTCCCAGAATGTTCTTGATTTCGTGAATCTCTCCAAAGA TGATTCTGTTTGTGGGTCGGTGCAAGAGCTTGATTTTTTCAACTTGGGGAAAACCGCGGTGGGTTCATCATCATCAAGCC GGGCTAATAACAATGACATCAACGACGGTGAAGGCAGAGACGAGGAGAAAACCTCTGAATCGAAGACTTTCTCTTGTAAC TTTTGCAAGAGGCAGTTTTCTTCGTCACAAGCCCTCGGAGGACATCAGAATGCCCACAAGCCTGAACGCGCACTTGCAAA GCGTAGACAAGAGCTTCACAACGCTGGTGCTTTTTGCCACCCTCATTTTCCTTATTACACTTATCCTAGTCTCTCAACAT CCCCTTATTATGGATCTTATAGCAAAGCACTTGGGATTAGGAGGGATTCCATGATTCACAAGCCAGCCTATCCTCTCACC CCACCTGGCTTCAGGTTTGGTCAAGGTGCTTCTGCTTGGTCATCAATGCAAGACATGTTGAACATTTCTTCTCTTGATAG ATTGAGGATGGGTCCTGGTTTGAATCCAAATATTGGAGTTGGGATTCTAGGAAATGGAGGTTCAATTAGTGCACCACCAC CTTTGAAGGTAGAAGATGAGGGTAGTAGAACTGCTGGAACCACTCTCCAATTTGGAGAATCTTCTGCAAATGCTGCTGCA AGGTCAAACACAACCCTGGACAAGTCAACTCTGGTTACCACTGGTGAACATCATCAGTCCAACGTTGAAGAACCTGACCC TTCTGGGCTTGATTTGTCTCTTAAACTTTAA
Protein sequence (LotjaGi1g1v0653100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKEKEDEEGSNGSSSQNVLDFVNLSKDDSVCGSVQELDFFNLGKTAVGSSSSSRANNNDINDGEGRDEEKTSESKTFSCN FCKRQFSSSQALGGHQNAHKPERALAKRRQELHNAGAFCHPHFPYYTYPSLSTSPYYGSYSKALGIRRDSMIHKPAYPLT PPGFRFGQGASAWSSMQDMLNISSLDRLRMGPGLNPNIGVGILGNGGSISAPPPLKVEDEGSRTAGTTLQFGESSANAAA RSNTTLDKSTLVTTGEHHQSNVEEPDPSGLDLSLKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 276 | 275 | 9.7E-64 | – | |
| PANTHER | 2 | 276 | 275 | 9.7E-64 | – | |
| MobiDBLite | 45 | 72 | 28 | - | – | |
| MobiDBLite | 45 | 59 | 15 | - | – | |
| Gene3D | 54 | 118 | 65 | 1.2E-7 | – | |
| SUPERFAMILY | 74 | 104 | 31 | 1.78E-6 | ||
| Pfam | 77 | 100 | 24 | 3.0E-5 | – | |
| ProSiteProfiles | 77 | 104 | 28 | 11.489 | ||
| ProSitePatterns | 79 | 99 | 21 | - | ||
| MobiDBLite | 251 | 276 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi1g1v0653100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…