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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0654800 |
| Transcript ID | LotjaGi1g1v0654800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aquaporin 1; TAIR: AT3G56950.2 small and basic intrinsic protein 2;1; Swiss-Prot: sp|Q9M1K3|SIP21_ARATH Probable aquaporin SIP2-1; TrEMBL-Plants: tr|I3SRL3|I3SRL3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0654800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121426579..121433758) extracted from Lotus japonicus Gifu genome v1.2.
AAATCAATTCAATTTACTATTTGAGAATAAAATTGCTTCGTCCACGACATGACCACGCAGTTTGGTATCTCCATTTTCAT GCCCACACCACAAGAACAAGAACAACAAACATGCCCATGTAGCAGCGTGTTCCTGATCACGAATCACACCTCTGTTTCTT CTTGTTGTTGTTGATGATGATGGTGGGACGAACGAGGCTTGTGGTGTCAGATTTCGTTCTTTCTTTCATGTGGGTATGGT CTGGTGTTCTGGTTCGGATATTCGTCTTCAAATATCTGGGTTTGGGTCATGACCATGTCGGTGAGATTGTCAAGATTGTC TTCTCTGTCGTCAACATGTTCTTCTTCGCGTTCCTTGCTAAGGTTACCCGTGGTGGGGCCTACAACCCTCTCACCGTTTT GTCTGGTGCTATCTCTGGAGATTTCAGCAACTTCATCTACTGTCTTGGTTCTAGAATTCCCGCCCAGGTTACCTTCTTCC TTCTTTCTTTTGTTTTTCTCCCCTTACATAGCTTATTTGATATGGATTATAATTATTATCATGTATGTTTGGAAATCTTT AAAAGAAAGCCAAAATCAATTATGTGAAAAAGCTTAGGTGCAGTTTGTGGGTGTCAAAATTGATTATGAAAAGAAAAAAA CTGATCCAAACATGCTTATGCTTGGCTCAATTTCGTCCCTGTGTCGGGCAAGTTAGTCCTTAGAAGAAGAAAACATCGGG GCTAACTTGATCGATATTTGATACAATCAGGGACCGTGGGTGGGGTATATTCTTCTTTGGATATCCGTGTCACGAGTGCA AACACACCTGTTTCTTCTCGTGTTAAGTGGAGCATTTGAGATGCAATTAGAATATCTTTGAATTTTCTGCGTGCAGAAGA CGGCTTAACTCTTATTTGTAGGCACTAGGCATTCCTACTCTTAGATACATGTATAATTAAGATTTTGAAGCAAAAACATT CCTTTGTTGATTATTGAAATTATATCTGAAGATTTGGTCTGTGTACTTTTCTCATGTTTGATTTTACCTGTGTTCATATC ACAAGTTGATTAGGAGGACTTATGTTACATATGATTTTAAGACTGAATATGAATACATGTAGTTATAAAAAAATTCTATG TGAAAATAAAATAGGTTCTACTCTGTTCTTTTCCTTTTTTTTTTATTTACTTAGAGTTCCTGATTGTTTGAGGGTTCTAA AGGCAGTTATCCTAACTGTGCATTTGCTTACAGCTTCAGCAAGTTTTTACTTTTCTATGCTGTTGGGATAATTTATGTTG AATACAAAATCAAAGGTACTTGTGATTAATTGACTTGTCATATCTTATTTGGAGGTATCTATCTAAGCTGAGGCATTGTC ACCCTGGTTGGGGCATTTGATGATGGGGTCCAAATAAAATCTCATGAATTAGTCTTTTTGTTCTCTTTCTCCATTTATCC CCATAATTTTTCTAAGATATGTTTCTACCCTTTTAAGCACATCTCACTTTCCAACTATCCTTTCAGGCTACTGTGTGTTT GTGTCCCAATACAAGTACTTATTTTTTTTTCTACACAGTTCCCATCCTTGCCTCCAATACATCCACACACACACACACGC GCACACACACACACACACACACAGAGTGCCCTTGTGCAATATACTTATATATAGCTGAACTACATATAACTGGGCACTGC CAGCACAAATTGAAGTCTTGTGACATTCTCATTCATAGGAATTTTGTTTTTATTTAGGGATTGATATACATCCTAAACAA AACAGGATTTTGTTTTTGTTTACATGGGATATCAGTATTAATGGTATTGACAATTAATATTAACACTTAACATGCGAGGT CGTGCATATGCATTAAGCTTGTTATATATACACACTACCATTCCACTTTGAAGGTATTTAGTGAAGATATCTGGTAGTTA ATCATTAGAGTTCACAAAGAAGACAGTAATCTCCTCAGAGATAATCTTCTGTAGATCTTTTACTAGTGATTGAGTCCACT ATTAGTATGGCGAATCTGGTGTATAAGTGAATGTGACTAGATGACTGGTTTTATGGGTCAAAATCTGAACAATCATGATT ATTTCTTTTCGAGTTTCTTATTATACTTAAAGCTTTAGGCGTCCTTGCTCTGGCATGTATTGATGAGATATTGTGTAGAA ACACAGTACTGCTCAGATATAACATACCACAGAACACCCATGTATATGTGGTGATGTCTAATGTGTGAGGAAGCAGGGGT ACCAAGTGCTGCATCATGTTCTAGTATAGATGAACCATTTTTATACATCTCAACCAAATAAGTTAATATCTTAAACTCAA CTTCAATTGAAGATTGTCGTTCTAATATGCATGGTTTTAATCTCTTCAGGTTCTTGGATCTATTGTTGGAGTTAAACTTC TCATTGATACCATTCCTGAAGTAGGGCGTGGACCACGTTTGAATATTGACATCCATCGGGGCGCATTGACAGAAGGATTA CTGACATTTGCAATTGTAAGTGTTTCACTTGGGCTTGCCACAAAAATTCCTGGAAGTTTCTTCATGAAGACTTGGATCTC CAGCCTTTCCAAGCTAACGCTTCACATACTTGGCTCTGATCTTACTGGTGGTTGTATGAACCCAGCAGCTGTAAGTACCG CTGATCAATTTTTATCTGTCATTGTTTTGTTTACAGAACCTTGGTTATGTGAATTGTAGATCAAACCTTTCTTGTTTTCT TGCTAAGGAACATTGTTTGACATGTTCAGGTAATGGGATGGGCTTATGCTAGAGGGGATCACATAACAAGAGAGCACATC CTTGTATACTGGCTTGCCCCCATAGAGGCAACTATTTTGGCAGTGTGGACATTCAAATTGTTAGTCCCTCCTGTGAAAGA AGATAAAACAGGCTCCAAAAGTAAATCAGATTGAAGGAACTCCATTCTGTGCTAAATGTTTGATTTTATCTAGCTTTCAA TGATTGTTTGTGTAGGTGGTGGGATGAATGTATAGCAAGCCATGTTGAAGTCTAACTTTTGGAAGCTGTATAGTCACTAT ATTGTTTGGCAACTCTTGGGTTATTTATTAAAATCACATGCTCTTATGGTTTCCCACCCTTCACCTTTATAATTGAATAT TAAGAGATGATTTTCTCATTGGCTTCGACTTCATCCTGAAGTGATACTAATTGCATTCACGTTTGTCTAAACTTTTCAAA TGAGCATTGCGCTAATTACTAAAGGTATGTTTGGATATTTGTTGGCTCAAGTTTTAACGGACATTAGCACTCACTTCGAG GTAAGAAGTGAACGAGTCTCTTCTTATGAAATGAAATGTTTTCACGTTACTCAACTGAAATACAAATATACACTAATATT AAGAAAAACTTTTAATGCCTGCACACCTTCCCGTTACCTATTTCTTTTACGTCATGGTATTTTAAGTTATTTGCATTTAT TTAGTTTATAGCATTTCTTTTACCCTCATATTTTATTTTTGTGCCTTTTTGTTTGTTTGTTTGTCAGTTTACTCATTTGT ACATTACTTTTAGCCATTTTAGCTTGAGCAATGATATATAGACATTCCATTTTTATGGGACATCCACAAGTCATCTGCTT TAGTGGCAATTTTAAACCTCTGCCAACATTAACGATGGTTAAAAACCGTCGCAAGACTGTGTCGGTTGGTGGTCGACTAA AATTGTATGTCTGTTGGTCATTTTCGTTTTAGCTTCCTTTGGTTTTCATGACGATCTAGTTCGAAGTCAATTCTCATATC TAAAACCTTCATTCATTGTCAAGTTATTCTAGCTTAAGTTTTGTCCATTATGAAATTGTCTTTGTTTCCGTTGAGTTTTC AAAACCTCTTATTTTCATTATTTTCTCAGTTAAAACTTGTCAATTTAAAATTGTTTTCCCATTATTTTTTCAGTTTATTT TATGTTAGTCGGTATACTTGCACATTTACCTTTCTTGCTAAGTTGTTTGCACACATTCATATATTCTTTTTCATTTAGTA AATTGTTGGTTTATGTTTCTTTCAGTTTACTTCGCTGTCTCACAATTTATTTACCTGCACTAAAAGAGTTTATGCAATAA GTTCTTATGGTCATAAACGCTTATTAAACTTTCTACAGACGCACCCTAAGTTCATGTTTATAGTAAGAATTCAGTGAGTG TGCACTTGCCTAAAAATCATCATGTAAGCATTGTTTTTAATCGCGAAACAACACTGAAAAAACCAAAATCAACAGCTACG GAACGATGTTTGAGGGGTGGCAGAAGAGCTGGTTAGACCTTCCAATTGGAATGAGTTCAGATTTAGGAAATAATCATCTC TTGACAAGTACTCGTAAGGTGAAGACTTCTAATGAACTTAAGAAATAAGAGACAAAAAGAAGGTTGGGAAAAAAGATGAA TAAAACTAGTAAAGATCTCATCATGGTAAATGTTTCCGCACTGTCTTGCGGCAGCAGTACTAGTAGCCACTCAAGATGAA CATTACGATAGAGATCAAAATGAAATAAGGAGATTATACACTTCAGTACACAAGCTGTGGTTCGAATTCTGCCAAATCTA CAGATCCTGACTCAATTGGTGGCATTAGATATGTAGCCAAGAGCTCGGATGCCAGGGCAGCAATCAGTGGGATCCTCTTT AAGTTCTTCACAAATGGAATGTCATCACTCTCACCAACAGCAAGAATCTTCTCGTTTATCTCCACCATCCGGTCAAGCCT TCGCTTGAACTCGGGGTTCTCAACATCAAGAACAGCCGGGAAAATCCGAGCCGTTGTGCGGTTTGTCTGCAAAAAACAAT CCAGAAAGGTTACTTTGAGTAAATGCTTGTAATTTGAGTTCAGCATTTGTTCTATGTTGATCAACTCTTACTTGTCATGT GTGTTTTTCATGGTTACACAGGTTCCATTACTTAAATTTTGTAAGTCAGTTACTATATTCATCCTTAAGTATTGGAGAAT GAGTAGAAACAAACAGTAAATTACTAAGGCAGATTTTGGAAGAGCTTATCTTATAGTATAAGCACTTATACAAGTGTTTG AGTAAGCTTGTAAAAATAGTTTATGGCCTACCTATAAGTTATTTTGAGCTTATGTTTATAAGTTGCTCAGATCAGCTTCT GAATGAGCCGTTTATATGTATCCATAAGCTATTTTGAGTTTGCTTCAATAAACTTCTCAAATTAGCTTATAAATAAGCGC TTATTGACATCAATGTTTCATTGAATTGTTTCCCCAAACACACCCTAAATGGCTTTCAGCAGTGATCATGGCAAAAATAT GAACACAAACTAACCTCAATAATGACATGCATGTCAAATTCTTTTGTGTTAAGTCCAATGCCTTCATAGAAATCTGTGCG TTGGCAATCATTGAGATACATGGTCACATAAACCTGCAAGACAAATTTGATAATTATGTTTTAAGTTGAGGTAATGAACA CAACCTTATAATAAAAGACAGGAGAAATGTGATCTCTTAGACTGAAGTTTTGCATCTTGGATATAACAGATATTGATTTG CAATATTGGTTAAGGTCTGCACTGTGTATTCTATAATTTAGCATCAATTCACACAACTTTGCAAAAGAGAAAACCAAAAA ATTGTTTGCAAAAGAGAAAAAATTACCGATAGGCAGAAGAATCTGGACCACAACTTAGCCTTCCAGTCATTTAGAAATTG TGGCTGTGCCTTCATCAAGGCAGAGAAGAAGTCTCCATGCCTGTTCTCATCCTGGCACCAGTTCTCAAAGTACTTGAAAA TGGGATAACATTGGTACTCAGGGTTGGCCTTGAGATGCCTGTATATGGTTATGTATCTCCAGTATCCAATTTTCTCCGAC AAATATGTAGCATAGAAGATAAACTTGGGCTTGAAAAATGTGTATTTCCTAGCTTTTGTTAGGAAACCCAAGTCCAATGC CAAATTAAAATCAGATAAACCCTTGTTCAGAAACCTGCATGGAATCAAAAGAATGAGGTTATGTACCATCATATGGAAAG ATGGAAGGACGAAACAATTAAGACTTGGTGGATGTTTGGATACACGGTGAAAAACCACATTCAAGCCAAAATCACAGTGG ACAGCACAAAAGCTAAGGGAAGTTGCTTTTGTCTACCGTGATTTAGGCTCACCGTAGTTTTCCACCATGTATCCAAACAT GCACTTAAAAGCACAAGGTGAGTCTATACCCAGCATGCCTAGCCTCATCCCTAGACATCAGGGAGAAAATCTCAGCCACC ACAGGGTTGGTTTTCTGCAATATCAACATCCCAAGCAATAAATCAGGCTAAGAATAGAAGGCCAAAAGTGATTTTACTAA GTGCATGCTTGGAAACTCTTCCATAATTGATTTCGAAGCCAAAATCAATTCTGAAAAGAAGCTTATATGATTAGCTTCTG GGTTCCAGAATTGATTCTGATGAAAGAGAGGTTGATACAAACATGCTATAAGCAGAATTACATCAAACAACCCACATAAA ATAAGACCAGAATCCTCATACCTAACTGTATAGAGCAAGAACAAAATTCTCTAACAACTAAAAATTAAATCTTTTCCCCT TTGAATTGATAAAAACCACAACTATCAATTTGCAAAGTTGAATTCTGCATCAAATTGTGAAGAAATAAAGAGAGGGAGTT TTCAGTTTTCATTACCTTGAGCCTCCTTCCAAGCTCTTTGTAGAGAAGAAAGCCAGAGAATTCAGCAGTGCAAGACCTCT CAAGGAACTCCACAAAGATCTGCCTGAGAGGGCCATCAAGCTTATCAGCAGCCTCCTTGAACTCCTTGTTCCTCACAAAG TGAGTCTGGTTGTAATCAGTCTTGAACTCCTGAAGCAGAGCTTCAAACTCATGCTCGTTCAGGTTCTTGTTGATCTCAGT GTTGAAAAGGGTCTCCATCTCATCAAAATCAGTGGTGTAGAACCTTGGTGTCAAAAGGGTCTCCTTGATGGAAGTTTTAT TGGCTTTCTTGCTTGGTTTTGTGGAGGATGGTGGTGTGGTTGTTGCAGACATTCTTACAGTGCTGAACTTGGAGTGTGAA ATTGTTCTGGGGTTGCTGAATTTGGGAGCAGCATTGGTGAACTTGGAAATGGGTTTCACAAGAGCCATTGCAAACTCTGG TTGAGGACTGAGGACTGAGGAGAAGAGTGACAAGAATTGAGACAACTATATTAACTTGGA
CDS sequence (LotjaGi1g1v0654800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGGTGGGACGAACGAGGCTTGTGGTGTCAGATTTCGTTCTTTCTTTCATGTGGGTATGGTCTGGTGTTCTGGT TCGGATATTCGTCTTCAAATATCTGGGTTTGGGTCATGACCATGTCGGTGAGATTGTCAAGATTGTCTTCTCTGTCGTCA ACATGTTCTTCTTCGCGTTCCTTGCTAAGGTTACCCGTGGTGGGGCCTACAACCCTCTCACCGTTTTGTCTGGTGCTATC TCTGGAGATTTCAGCAACTTCATCTACTGTCTTGGTTCTAGAATTCCCGCCCAGGTTCTTGGATCTATTGTTGGAGTTAA ACTTCTCATTGATACCATTCCTGAAGTAGGGCGTGGACCACGTTTGAATATTGACATCCATCGGGGCGCATTGACAGAAG GATTACTGACATTTGCAATTGTAAGTGTTTCACTTGGGCTTGCCACAAAAATTCCTGGAAGTTTCTTCATGAAGACTTGG ATCTCCAGCCTTTCCAAGCTAACGCTTCACATACTTGGCTCTGATCTTACTGGTGGTTGTATGAACCCAGCAGCTGTAAT GGGATGGGCTTATGCTAGAGGGGATCACATAACAAGAGAGCACATCCTTGTATACTGGCTTGCCCCCATAGAGGCAACTA TTTTGGCAGTGTGGACATTCAAATTGTTAGTCCCTCCTGTGAAAGAAGATAAAACAGGCTCCAAAAGTAAATCAGATTGA
Protein sequence (LotjaGi1g1v0654800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMVGRTRLVVSDFVLSFMWVWSGVLVRIFVFKYLGLGHDHVGEIVKIVFSVVNMFFFAFLAKVTRGGAYNPLTVLSGAI SGDFSNFIYCLGSRIPAQVLGSIVGVKLLIDTIPEVGRGPRLNIDIHRGALTEGLLTFAIVSVSLGLATKIPGSFFMKTW ISSLSKLTLHILGSDLTGGCMNPAAVMGWAYARGDHITREHILVYWLAPIEATILAVWTFKLLVPPVKEDKTGSKSKSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| Gene3D | 2 | 238 | 237 | 9.1E-17 | ||
| PANTHER | 3 | 239 | 237 | 1.1E-121 | – | |
| PANTHER | 3 | 239 | 237 | 1.1E-121 | – | |
| SUPERFAMILY | 4 | 230 | 227 | 2.62E-29 | ||
| Pfam | 7 | 219 | 213 | 1.5E-7 | ||
| PRINTS | 8 | 27 | 20 | 1.5E-11 | ||
| Phobius | 9 | 32 | 24 | - | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| Phobius | 33 | 43 | 11 | - | – | |
| TMHMM | 42 | 61 | 20 | - | – | |
| Phobius | 44 | 62 | 19 | - | – | |
| Phobius | 63 | 129 | 67 | - | – | |
| PRINTS | 90 | 109 | 20 | 1.5E-11 | ||
| Phobius | 130 | 149 | 20 | - | – | |
| PRINTS | 132 | 150 | 19 | 1.5E-11 | ||
| TMHMM | 135 | 157 | 23 | - | – | |
| Phobius | 150 | 168 | 19 | - | – | |
| PRINTS | 163 | 185 | 23 | 1.5E-11 | ||
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 169 | 191 | 23 | - | – | |
| Phobius | 192 | 202 | 11 | - | – | |
| TMHMM | 202 | 224 | 23 | - | – | |
| PRINTS | 203 | 223 | 21 | 1.5E-11 | ||
| Phobius | 203 | 224 | 22 | - | – | |
| Phobius | 225 | 239 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0654800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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