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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0655600 |
| Transcript ID | LotjaGi1g1v0655600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-L-arabinofuranosidase 1; TAIR: AT3G10740.1 alpha-L-arabinofuranosidase 1; Swiss-Prot: sp|Q9SG80|ASD1_ARATH Alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A0R0KHR7|A0A0R0KHR7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0655600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121520776..121528034) extracted from Lotus japonicus Gifu genome v1.2.
CGAAAGACTAGGATCTGTGGTAATTGTTAACCAACAGTTATTTATTGAAATTTATCCCAAAAAAAGTCCTATAATTACTA GCCAAAAAGAAAAGAATGAAACCAAGACAAACGAAAAGAAATGGATTTCTCAAAGGCTTGTTGTAGTTTCCTTTGGCTCT TAGTGACATGTGATTTTGCATATCAATGTTATGCTGCCAGTGCCAATGCCGTTGGAAACCAGACTTCAACACTAATTGTA GATCTTGCAACTGCTGGAAGACCGATTCCCGAAACTCTCTTTGGAGTATTTTATGAGGTTGGAAAGGATTATGGTGTTTG CAGATTCTTCACAATATGAAACTGAATTGATAGATTAAATTGGAAAGTTTTTTTATTTAAATATTTTAAATTTTACTAAA TTTTGAACTTCTTTTACAGGAAATCAATCATGCTGGCACTGGCGGACTATGGGCTGAGCTTGTGAACAATAGAGGTAACT AGTTTCCATATGAATTTAGTATGTTTAGACACAAATATTCAATTTGGTCTTGTCGTATCATAATTAATAAAAATAAAAAA GAGTAAACAAATGTGATGATGATCAGATATTTAAACGTTTGTATAAAACAATATTAAATTTTTTTGGTACTTTTAAAATC AGAGTGATTACAAATTTAAACAGAAAATGTTTATCTGCCTAAATTCTTTAGAGCTATTACTTCATTTTGATATGTCATTT CAATCTTCTCTTGCTAAATGAACAAAAAATAACTCCAACACATAATTTTTCAACTTCTAGTGAGAGTTCTAGAAATGATA ATAAGTTTAATCATTTGCACACAATTTGCTTCACGATAGATAATATATTTAAGACAATAATATTTGTATTGCTAGCGCAT GTATGGAATTCATATATAAATTTGTGTTTCAGGTTTTGAAGCAGGAGGAACGCAAACTCCATCAAATATTGACCCTTGGA CCATAGTAGGAAAAGAATCCTTAGTCTTGTTGCAAACTGAACGTAGTTCTTGCTTTGAACGCAATAAAGTGGCATTGAGA ATGGATGTGCTATGTGACCAATGTCCTTCTGATGGTGTTGGTGTCTCTAATCCAGGTTATTGGGGCATGGTGAGAATAAC TATTTAATATGTCGCATACAACCTCCTATCTCTTTGTTGTTTTGTTATCCCTTTTTTAATTGATACTTAAAAATAAGTAT TACGTGTGTTACATGCTACATGATATTTTAAAAAAATAAGAGATAAAATATTTAAAATTACAAAAGGTATACTTATAAAT TATGGAGATGGAGTTTCATAAATTAAAAAATACTACAAGATAAATCATTTAAATTAAAACATTATATCATTTGTGCATGT TTTTTTCATGGGAAATATATGTTAATGTTTAAATTTATAGTTATGAAATTTTTTAATATTGACAATCTCGTATTTATGAT TGACAAAACATAAGTAATAGAAAGCTTTGAATTTAAAAAATCATGTAAAGTCTTAATATGTGAGATATTTAATATAGAAG AAGTTATGTAGTGCATTTAAAATGAGAGTAGATTTGATTAAACTTATACATTCTGGATAGAAGTTAAAACTCAACACTTG ATTATATGTGGATTTATGTCCTTGAAACAAGTATTTCTTTTGCTTAGAAGTTTACTTTTCTTCCTTACTAGAATTTAAAT ACTTTTCATTTTTTAACAACAAGATCATGTTGCAGAACGTTGTGCACGGAAAGGAATACAAAGTTGTCTTCTTTGTAAAA TCAACGGGATCACTAGATATGACAATATCATTTAAAAAAGCAGAAGATGGGGGGATATTGGCGTCTAAAAATGTCAAGTG AGAGCCATGCATGTTTTACCATCCAAGAGAAACCATATGTTCAATAGCTTACAAAATGCATCCTTTTATTGTATATGATA ATTGTACAATTTTAATAAACGATCTTGCAGAGCTTCTGCATCAGAAGTTGCAAACTGGAAAAGGATGGAGCTTACATTGG TACCTACTGAATCAAGTTCTAATGCAACCCTTCAGTTAACAACAACTCAAAAGGGTGTCATATGGTTGGACCAAGTGTCA GCTATGCCTGTGGACACTTTTAAGGTGTGTCCCGTCAAGAATTTCCACTTATATAATAAGACTTTTCTAGCTACTTTCTC AAGCTCTAGCTTGAACGTTTGAAACTTAATTTTTGTGATATTCAATTTTTTTCCTGCCTATTTTCATTCGAAAATTGTGT ACAAACATGTTTTGGTACAGGGCCATGGTTTCCGAACTGACTTGGTCAACATGGTCTTAGAGTTGAAACCTGCCTTTATT AGATTTCCAGGTATGTAAATAAACCATAGTAAAATTCAAATATTTCAAAAAAAATTCATGTTATCATATCTTAAGGGCGA CTCTCTAGTAGATTGCGAGAATTTTCTTATCTTTCTAAGAAAATTTGGCAACTCTAAAGTTTTACCATAAAAAAAAGTAT AAAAAAAAAAAACCCAAGTATTTGGTGCATTATAAAGGCCCTTTAAATATAATATAAAACTTTCAAATTATAACTTATTG AATATATATTTTATGATAGAAAGTTTGTTAACTTGTAATAATAAATAAACAACAATATAAAAAATATATTTAACCTTTTA TTTTTAGAAAATATAAAATGTTATATATATATATATATATATATATATAATTGTACATTTTTATGATGATGGGTTAAAAT ATCATTCAATTTTAATTTGCCTAAATATTATTTTTTTCAAAAAGTAAAAGATATATTAATCACAGCTTTGAGAACAAAGC TTAAGAAGAGACAAAGAAGACACGAGTGATTAGTAGCAACAAAAAGTTAACCACTCGATGCTAAAAGGTAGTCCCCAAAA ATAAAAATCAAACAAATAAGTTATACAACGCCAAAAACGTAAAACCAACAAAAAAAACAAAAGAAATCCTACATAGCAAA AATCAGCCCAAGAGCTTAAAAAAATAGATTGAGACCAAAAGAAATCAAATACCAAAGGAGAAAGCCACTAGAACAACAAC AAAGGATAAAATAGTCGGCTTCGATCAAAATCACCAGGCCACCAACCACCACCCCTTAGAAGGCATGCACGCATGAATTT GTGCCGCAATTTGGTTCAAAGCAACCTTATACGTACAATCATACATCATACCCAAGTAATTACCGATCTACAGAGAACCA AAAAGGTCGTATCCTTAGAAAAAGACAATCATTGGAAACCCCAACGAACTCGGTCTTTTTCCTACCTTTATTCTCAACTT TCTGGGGTCTTCCCCTAGGCCTTGAGGATTTAACAATAGATGCCGGCAAAACTAATTTCCTTGGGCGTCCACGACATCTA GGGTAATCCTATCCAAATCCTCCTTGATAACGAAGCACAACCTTGAACATAAAATCTTCATTAGCGCCAAGAGTAACGCC CAAAACTAAGTTGTATCCACGATTAATACCGCCATTGTCTATGCAAGGACATTGGTTCACCATCACCTCCTCAACAGCCA ACAATCGTCCATAGTGCCCTCTCATCATCAAGCCTTCGTACCTGTGATTGAACCTCCTCTTAAACATACTGCACCTGATT CACTTCTTCAAATATCTGAAATTGTTCCACTTCATTCAAAACTCTACTTGAAAATGATCTGGAAAAAGAAACTCATCCGA TAAATATATTCTAGTAGTAATTAAAAATAAAAGTAAAAAATATTATTTGATTGAATATATAATTAAAAAAAGCTTAATAG CACTTTTGGTCCCTCACTTATCACAATTTGGCAGTTCTGGTCCCTCATAGAATTTATTAACCTACAACGTCTATCCCTTT TACTAATTGTTGCAGTTTTGATTTTCCGTCAACTTCCATCAAATATTTAACGGTTTATTATTAAAATAAATCACTTAAAA AGATCAGAAACCATAAAATTGTCAATTAAAAACGTAAAATTGTTCTTCAAGCCTTATTTTTAATTATTTTTTAATTAAAA ACTGTTAAATATTGGATGAAAGTTTTCGAAAAACCAAAATTGCAACATTTAGTAAATGTGAGGGATATGTTGTAAGCTAA TAAATTCCTTAAGGGATCATAACTGCTACTAAGCCTTAAAAAAATAATTAATGTTAACTTTGTTTATATTTAGTATGAAA GTTTTAGAAAAACGTTATCATGTGAGTAAGATACATGGATTAATTATTGCAAAATAAATATAATAAAGCTGGTACCAGAA AGATTATATATATTAATATAATCTTACATTCAATAATAAAGACATGGGTGTCATTTGGTTAAACAGGTTAGGATATCATT ATTTTATTTAGAGACATATAAGTGATCCCCAACACTTTAACTTATTGAACAATAAATCTTATGATGTTGAATGGATGTTA TAAGAATACACACTAAAGGATAAATTGCACTTTTTTATTTTGCTACAGGTGGTTGTTTTATTGAAGGACAAACACTTAGA AACGCTTTTAGGTGGAAGGATAGTGTTGGACCTTGGGAAGAGAGGCCAGGGCACTTTGGCGATGTTTGGGGTTCCTGGAC AGATGAAGGATTAGGATATTTTGAGGGTCTTCAAGTAGGTACATTTAATTGGATATGAGCTGAGGTCAATCATTGTTTTT ATGAAATTCAATAGCTTTTATATACTATATTCCTTTTGTAGCTTGCTGAGGATATTGGTACAAAGCCAATTTGGGTATTC AACAATGGTATTTTCACATTTGTTTTTATCTTTTTTGTTTCAGTTTTAGCATAGATTAAGAACCTTTAGTGACTTTAGAA TTTTGTTTGTGTTTAATTTCATGTTAAAGGCATCAGTCATACTGATCAAATTGATACAAGCGTCATCACACCTTTTGTCC AAGTATATTTTCTAACTCTTTTTTACCCATCCATTTTAAATTCTTTATCAAACAATGGTATAATTTTGTTAATAATATTA TCTTTTGCTTAACGTCAATTTCAGGAAGCCCTTGATGGTATTGAGTTTGCCAGAGGTCCAGCCACTTCTAAATGGGGTTC TCTTAGAAAATCAATGGGGCACCCAGAGCCTTTTGACCTAAAGTATGTTGCTATTGGAAATGAAGATTGTGGAAAGAAAA ACTACCTAGGTATGCACCTCTTTAATTTCTCTATTGTCCTATTACTTGTCCATTAGAATCTACGTACCTTACACGAACTC AATATTATATTATATTCCTAGACAAATGCTTTTTATTAAAACAGTGTGAATACTTATATTAAAGATTTCACAAATGAAAA AGATGACATGAGATTAAACTAATATTTTCAATTTTTATTTATTAGGAAACTACTTAGCATTTTACAAAGCTATACGGAAG GCATATCCTGATATTGAAATGATTTCAAATTGTGATGCTTCTTCTGAGCCATTGGATCACCCAACTGATTTGTATGACTA TCATGTAATACTCGTCTCTTATAATTGACCCTCACAATTTAATGTTTCATTTACATTGAAAAATAATGTGTGTATTTTTT TGTTTTTATTTAGCCTTTCATCATCCTCTCACATATTCTAAATTTCTTAACAGACTTACCCTAATAATCCTTCAAACATG TTCAACAATGCACATGTGTTTGATAAGACGCCCCGCGATGGTCCAAAGGTTTTTGGTGTCCTCTTTAACTCTATATACGA TATCTTTATGCACTTAACACATGTATTAATGCCTTGGGTGATTTGAAAATTGTTCAGGCTTTTGTGAGTGAGTATGCTCT AGTTGGAGACCAATATGCTAAGTATGGAACCCTTATAGGAGGTGTGTCTGAAGCTGGCTTCCTTATTGGATTAGAAAGAA ACAGGTTAAATTTACTGCACATTTGCTTAAATATAGGAGTTGGATACTTTGTTATTTTTAAAACTAGTAGATTGATTATT GTACTTACCATTTTTTTCTCATTTATGATGCAGTGATCATGTAGCAATGGCTGCTTATGCACCACTTTTTGTAAATGCAA ATGATAGGAAGTATGTATATTCTATTTCTCATAAATCTATAGAATAAATATTTCATTATATTCATGAAGTTATTAAAATA ATGTAAATATGCATAAAAAATAGTTTACTTTTTTTTTGCAACGGGCATAAAAATAGTTTACTTATTGCCTCATCAAATTT TGAATTCAAATATAAATGATTATAAAATTTATTGTTAATTAGTAAATGACCTATTAGTACATCAAGATAATAATAAGATT ACATTTACATTATAGGTGGAACCCAGATGCAATTGTTTTTAACTCAAATCAAGCTTATGGAACTCCTAGCTACTGGGTAA CACATATGTTTAGAGAGTCAAATGGAGCAACATTTCTTAACTCAACACTTCAAACACCTGATCCTTCCTCATTTGATGCA TCAGCAATTCTTTGGCAAAATTTTGTAGATAAGAAAACCTACTTAAAAATAAAGGTAAGACATATTTAGTTTTGTGTTTT TGTGCTAAAGAGTTATAATACTTGTATATATTTTTTTATTTTGATGTAATATTGATTTTTTACTACTATTTTTTCACATG ATATACACATTATCTGCAATTGACATGTATAGGTTGCAAACTTGGGGAACAACAAAGTGAAACTCAAAATTATTGTTCGC GGATTGGAGAGCCCAAAAATAATTGGGACAAAGACTGTGCTCACATCTGTAAATGCATTGGATGAGAATAGTTTCTTAGT ACCAAGAAAGGTGGTGTTGTGTTCTTCCAATATGACCATATTATGCATTTTTTCTTACAACGAAAAGTTAAATTGCACCC GCCCATGATGGATTCCTGGACCTCCTCCTCCCCAACTCATATGTCACTTAGTTCTTACCACTTGAGCTATCATTCAGGAA CATATTATGCATATTTAGGCTAACATGTGGATCTAATATCTTGTCAACGTATGTTTCTTTTATATACAGGTAATACCAAG ACAAAGACCATTTCATCCTCGTCACAACAAGATGAAGGTCTTAATCCCTCCAATTTCAGTTACAGCATTGGATTTTTTAA AATAATCAATGTAATGGAGATATGATTGTTGATTTCTAATTTTGAGGATGAATGATATGTATCTTAAACAAGAAATATTT GTTTAATTGATAAAAAATGGAAAATATAACTTTTTTATATCTTTACCTAAACCTTGAAGACGGACACCTCTTATCCTTCA TCAACACATAATTTTTCTTAACGTGGTTAAAGTCCTACCATTAATTACACTAATATTCA
CDS sequence (LotjaGi1g1v0655600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTCTCAAAGGCTTGTTGTAGTTTCCTTTGGCTCTTAGTGACATGTGATTTTGCATATCAATGTTATGCTGCCAG TGCCAATGCCGTTGGAAACCAGACTTCAACACTAATTGTAGATCTTGCAACTGCTGGAAGACCGATTCCCGAAACTCTCT TTGGAGTATTTTATGAGGAAATCAATCATGCTGGCACTGGCGGACTATGGGCTGAGCTTGTGAACAATAGAGGTTTTGAA GCAGGAGGAACGCAAACTCCATCAAATATTGACCCTTGGACCATAGTAGGAAAAGAATCCTTAGTCTTGTTGCAAACTGA ACGTAGTTCTTGCTTTGAACGCAATAAAGTGGCATTGAGAATGGATGTGCTATGTGACCAATGTCCTTCTGATGGTGTTG GTGTCTCTAATCCAGGTTATTGGGGCATGAACGTTGTGCACGGAAAGGAATACAAAGTTGTCTTCTTTGTAAAATCAACG GGATCACTAGATATGACAATATCATTTAAAAAAGCAGAAGATGGGGGGATATTGGCGTCTAAAAATGTCAAAGCTTCTGC ATCAGAAGTTGCAAACTGGAAAAGGATGGAGCTTACATTGGTACCTACTGAATCAAGTTCTAATGCAACCCTTCAGTTAA CAACAACTCAAAAGGGTGTCATATGGTTGGACCAAGTGTCAGCTATGCCTGTGGACACTTTTAAGGGCCATGGTTTCCGA ACTGACTTGGTCAACATGGTCTTAGAGTTGAAACCTGCCTTTATTAGATTTCCAGGTGGTTGTTTTATTGAAGGACAAAC ACTTAGAAACGCTTTTAGGTGGAAGGATAGTGTTGGACCTTGGGAAGAGAGGCCAGGGCACTTTGGCGATGTTTGGGGTT CCTGGACAGATGAAGGATTAGGATATTTTGAGGGTCTTCAACTTGCTGAGGATATTGGTACAAAGCCAATTTGGGTATTC AACAATGGCATCAGTCATACTGATCAAATTGATACAAGCGTCATCACACCTTTTGTCCAAGAAGCCCTTGATGGTATTGA GTTTGCCAGAGGTCCAGCCACTTCTAAATGGGGTTCTCTTAGAAAATCAATGGGGCACCCAGAGCCTTTTGACCTAAAGT ATGTTGCTATTGGAAATGAAGATTGTGGAAAGAAAAACTACCTAGGAAACTACTTAGCATTTTACAAAGCTATACGGAAG GCATATCCTGATATTGAAATGATTTCAAATTGTGATGCTTCTTCTGAGCCATTGGATCACCCAACTGATTTGTATGACTA TCATACTTACCCTAATAATCCTTCAAACATGTTCAACAATGCACATGTGTTTGATAAGACGCCCCGCGATGGTCCAAAGG CTTTTGTGAGTGAGTATGCTCTAGTTGGAGACCAATATGCTAAGTATGGAACCCTTATAGGAGGTGTGTCTGAAGCTGGC TTCCTTATTGGATTAGAAAGAAACAGTGATCATGTAGCAATGGCTGCTTATGCACCACTTTTTGTAAATGCAAATGATAG GAAGTGGAACCCAGATGCAATTGTTTTTAACTCAAATCAAGCTTATGGAACTCCTAGCTACTGGGTAACACATATGTTTA GAGAGTCAAATGGAGCAACATTTCTTAACTCAACACTTCAAACACCTGATCCTTCCTCATTTGATGCATCAGCAATTCTT TGGCAAAATTTTGTAGATAAGAAAACCTACTTAAAAATAAAGGTTGCAAACTTGGGGAACAACAAAGTGAAACTCAAAAT TATTGTTCGCGGATTGGAGAGCCCAAAAATAATTGGGACAAAGACTGTGCTCACATCTGTAAATGCATTGGATGAGAATA GTTTCTTAGTACCAAGAAAGGTAATACCAAGACAAAGACCATTTCATCCTCGTCACAACAAGATGAAGGTCTTAATCCCT CCAATTTCAGTTACAGCATTGGATTTTTTAAAATAA
Protein sequence (LotjaGi1g1v0655600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDFSKACCSFLWLLVTCDFAYQCYAASANAVGNQTSTLIVDLATAGRPIPETLFGVFYEEINHAGTGGLWAELVNNRGFE AGGTQTPSNIDPWTIVGKESLVLLQTERSSCFERNKVALRMDVLCDQCPSDGVGVSNPGYWGMNVVHGKEYKVVFFVKST GSLDMTISFKKAEDGGILASKNVKASASEVANWKRMELTLVPTESSSNATLQLTTTQKGVIWLDQVSAMPVDTFKGHGFR TDLVNMVLELKPAFIRFPGGCFIEGQTLRNAFRWKDSVGPWEERPGHFGDVWGSWTDEGLGYFEGLQLAEDIGTKPIWVF NNGISHTDQIDTSVITPFVQEALDGIEFARGPATSKWGSLRKSMGHPEPFDLKYVAIGNEDCGKKNYLGNYLAFYKAIRK AYPDIEMISNCDASSEPLDHPTDLYDYHTYPNNPSNMFNNAHVFDKTPRDGPKAFVSEYALVGDQYAKYGTLIGGVSEAG FLIGLERNSDHVAMAAYAPLFVNANDRKWNPDAIVFNSNQAYGTPSYWVTHMFRESNGATFLNSTLQTPDPSSFDASAIL WQNFVDKKTYLKIKVANLGNNKVKLKIIVRGLESPKIIGTKTVLTSVNALDENSFLVPRKVIPRQRPFHPRHNKMKVLIP PISVTALDFLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 649 | 649 | 0.0 | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| PANTHER | 1 | 649 | 649 | 0.0 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 25 | 8 | - | – | |
| Phobius | 26 | 651 | 626 | - | – | |
| Gene3D | 75 | 223 | 149 | 2.0E-6 | ||
| SUPERFAMILY | 208 | 541 | 334 | 1.1E-81 | ||
| Gene3D | 224 | 532 | 309 | 2.0E-75 | – | |
| SMART | 457 | 643 | 187 | 1.2E-45 | ||
| Pfam | 458 | 643 | 186 | 4.4E-31 | ||
| Gene3D | 533 | 649 | 117 | 1.7E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | L-arabinose metabolic process | The chemical reactions and pathways involving L-arabinose, the D-enantiomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc. | ||
| Molecular function | Alpha-L-arabinofuranosidase activity | Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides. |
Expression pattern of LotjaGi1g1v0655600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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