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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0663200 |
| Transcript ID | LotjaGi1g1v0663200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein family; TAIR: AT2G26850.1 F-box family protein; Swiss-Prot: sp|Q6NLB1|FB118_ARATH F-box protein At2g26850; TrEMBL-Plants: tr|Q2HSX6|Q2HSX6_MEDTR Cyclin-like F-box; Found in the gene: LotjaGi1g1v0663200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:122442285..122448524) extracted from Lotus japonicus Gifu genome v1.2.
GTGGGTGTGACAAAATGCTTACGGTATTAAATAAGGGTATGGTAACTGTGGAGTCCTAGACGAAACATCCTGGTACAATT TCCACTCGGTACTCAATTGGAGAAGATTGAACATTCACGTTCGCTTCCATGGGGAACACTGAAAAACGTGGTAACATGAT CTCTCTCTTGAATTTGCCTGAACCCATTCTGGATTGCATCCTCAAACGCCTCTCACCAACCGAACTCATCAAAATGTCAG TGGTGTGCACTTGTTTAAAGGATGCATGTCGAAGTGATCATTTATGGCAAAACCTCTTCCAACAAAAATGGGGTACAATC ATTGGTGATTTTGCTTTCAAGGAATGGCAATGGCACATTGCAAAATTCAAGTCAGAAGAAGAAAACCTCTTCAATCAAAA CATAAATCAAAATGGGTCACTTGGGTCTTTGTCTTTCTGTGGTGGCGCTTGGCCTAAATTATGCCTTAACTCATATTTGG AAGATTGTAGCCATCTTCAGAGCTTCTTGTCAAATAAATTCATGATTGCTCTTTATTTGGAGACTGGCAAGTTCCGGTTT CCAGCTCAAGTATACAGGGTAAACCCTTCAAGCCTTCAACTCTCTAGTTTAATTTTTATGGTTTCATTATGAAATTCTCA ATGCTATTTTTCTTCAGGGCACACTTGTTTCTGATTGCATATTTAGCTATGACTCCAAAAGTGATACCTTTGTAGCAAGG TAAAAAATGTCATCATATAATATTATTAACATTTTTCAGTTTTAGATTTTGAAATGTTAACTTAATTATAACATTAGTGA TTTCATGGGTTAATTTGGTGAATATGAATTAGTTTGAGTATGATACAATTGGTGGTTTGTAACTAGATGTATATCTCAGA GAATGTTTGGAAATCCTTTATTCTGAAGCTAAAATCGGTTCTGTCGTGAGAAGCTTCTCTGGGTAGCTTCTTGGTGACAG GATTGGTTTTGTGAAAAGAAAAATAATTTAAACATATTATTACATTAGGGAACGAGGCGGGGGATGGCTGATTATGGGGC GTAATATCGGCTGGGAAAAGCTGAGACGTTCCTCGGTTGAAACCCCTCCATGTGTTCGTTACGTCTCTGATTGTTTGGAA GACTTAAAGCCCGGTGATCATATTGAGATCCAATGCAAGCTAATGGTTGAAACTCATTATGGTAGGTTTCTATTTTCTAA ATTGAACTTATTCTATAAAATTTTAAGATGAAAACAACCATTCAATTGGTAGCTGATGTATCAATTTTTGTTTGCATTGC GTGTTAACTTTTCTAATCAGTGACAATTGGTAGCTTTACCTAAAAAAATTCATCTGCAAATGAACAATTAAGGTTTATTA ATTATCACTCAGGTATTGCAATGAATGGTTTGCAGATTGGTGGTATGCTGTTATTGGTCACTTGGACTCATCACTCATGT AATGAGAATGAGCACTGTAGCTGTGGTGATTCAGGTGATAAATCATTTTGCATAATTGAATTCTCTTTGTATCAGTCATA TTGTTATGTTTAGCTGATTATTTGATTTGATTATCCCAACAAATGAGTGTTGGTAGCCCTCCTCTAAGTTAAATGATCCT CCTGTCACACAAAATGATAATGATACAAGCCTAGACCTCCGTTACTTAGCTAACTAGTATTTTTGGAGAGTAAGAGTCTT TTCACATAGACATTGTGTTCCATTCAACGTAAACAACACATTTTTGCTCCATTCATGTTTAGTGCCTAGAATGCGAGATC TCACTTTCTGAATTCTGATGCCAAATTAAATGACGTTTTGGATTCTTGAAAGTTCAAACACCCACTAAACATTTTTTTCC TTTTTACCAACAAAGAAAATTTTATTCAATGGAGTATAATGGCTTCCAGCTTCTCCAACCCTTACACATAAATCTGAGTT ACTTCAGGTGAAATTAAAGGTTAAAGTTTCAAGAAAAACAATCAAAAGTCTTTTCTCAAATATTAGCTAATAAGAAATCC CATTTTTGGTTAAAGTCCATAAAGAAGCTACCACATGAGCAGCCTAGAAAGCTGGCAGAGGGTGTCACTAACATTGTAGA CCAAACTGATCAACATGAGCTACACAGACGAAAATCCAGTGCCTCCTCTGTTGAAATTTCCTCGAAAAGAAGATCTTCCT CCTCTGCTGAAACCTCTACCTTAGCCAGGATTTTAAAAAGTCTGACAATTGCTTTAATTAGTATCATTTCTCTTGTATTG AGACTGAGCCAGATTAGCTTGACCAGCCTGAGTTTTATGCTTCTCGAGCCTTCCTTCCTTGAGCCATTAACAAGGCTTCG ATTTTATCAACAGTGTGAGAATCATTTGTGAGAAATAGAATTAAGGCAGGCCTCATACTCATCTCCCAAACCATTGATAA TAGCTTCAATGTGATCTCCAACTGAAATAGGTTTGCCATCCTCATCAAGTGGAAGAAAGGAGCCAGGAAAGTAGTAACTG ATCTTGCTGCTTCCAATGAGCAAGTTCTGGATCAACATCGTCTTGAAAATCACCATCGCTTCTTGTTCACTATATCTGAC TGGAGCACCTTGTTCGATGATGAATTTGTGAAGCTTGTATCCTCTGATTGTTGGAAGAGCTTGATGCTTCATGGAAGATA ACTTGAGTCTGTTAGCTTGAATGAGCTAAGGTTAGAGAAAGTAAGGATGGTGGCAGAAGCCATGGTGAGGATTTGGCTTT GATACCATGAAAGGTATTAGGAACCTTTGATCATTGTAGAACTGAGTAGGATTTATTAGAATTTGGGAGGTCTAACTCTA CCTCAAAAGCTAGCTCGGAGGTGAGGACTGTCTTCCCATATATAAGGGCTATCTTGGCCGTATCTCTAGTCATGTGAGAC TTATCAACAATATTGAATGCAAGCTTCAGCTTTATATAACAGTACAATCACATCTAACATGTTGGTTAGCCACTGATATA ATCATAACCAACTAACTGAGTTGGTTATTGCTAACTAATCACTCATCCTATCATAACTTCTAATTCTTTTTTAATTGTTC AAATATCTCAGTCCATTCATAATAATGCTTTGATAGAAAAAATTACAAACGTCTGCACATGATTTTTGTTCTTTCTTTTA TGCTGGTTCTTTTAAAAATGAGTGAATGTTCACTTGGTCTCTGAATGATTTTGCCGCCGGCAAGTTAGTCCTTGGAAGAA GGAAAAAGTTGAAGTTCACCCTGACAAGTTAGTCCCTAAAAAGGAAGCGAGCTTACTTCAAGACTCAAGTTGACTATTCA CTCTGCATAGGGATTGAGATCCTCTCCCATTTTTCTATCTCAATTCCGATGGCACCAGTTAAAAGTTGACACATTTTTAA GATTTTCCACATCTTCTAGCGCTGTTATCTTAGCCAGCACATTTTTAAAACATGTGTTGTTGGGATTGCCTCATTATCTT ATCACTTATTTGAATTTGATTTAAGGGGATTGTGATATGGGTGTAGATGACTAGATGGATTGTATCTTATCTAATGGGTT TAGATAAGACTCAATCTTATCTTATCTTATGGGTTTAGATAAGATTATATCTTATCGGTTAAGATTATCTTATATTGTAA TACTAGAGTTAGTAGTGTCCTATAAATAGATAAGGCCCCTAACCCTAAAATGTGTGCTAGTGTGCGCCAGGTGTGTGCGG AGTGCGCCGCAATTGGGCGGTGTGCAAGTGCGCCGCAACATGGCGGTGTGCGAGGGTACACAACAATTGAGCAGTTGAGA GAAACTGCTATTGCAGATGTGTGAGACAATTAGGCAGTTGAGAGAAATTGCTATGTAAACGATTATTAAGAATCAATAGA GGGGGCTATAGCTACTCTATAGCCGCAAAGGTAGGCTTAATTGGCCGAACTGCGTGAACAAAGATTCTGTGTGGTTTATT CTTGCTTTCTCGCTCTATCGTACTGTCTGAATCAAGTTGTGCCTTTCTTTCCTCAACAATTGGTATCAGAGCGCTTGGTT CGCGGGACCGAGGCTGGTGTGCCGAAAGTATCCATTGACGGTGTAGTCAGGTGGAGTGTTCCGTTTCTCACGGTGGAGCG AACGGCGGTGCAAGGTTGGATATCTTCCGCTACGGATAAAGGCCATGAGGATTGTAGAAGTTAGCGAGAGGAGAAACTGA CGGATCTAACAGACACGGGACATGGTGTTGAGCAAGGTGGAGTTCGAGTGTCAGAGTGCAGCGATCATGTTGACCAAGCC AGTCACCACCAATCCCAAAAAAATCAAGATTCAAGAAACTGAAGCAACAAATCATCACAAGGGAGTTTGGAATTCGCCAA GGTGGAGATTGTTGAGAATTGACTCATTAGTAAAATCTTGGGGCCGCAGATTTTATTTTGAGGCCTAATATTCAGTTTAT TAGGATTTGATTTAATGGAGAACACAGTCCCGGAAATCAGGATTCATAAGCTAAGCAATTGATCTTCACGAGGGTTCGAG AATTCGCCAAGGTGGAGATTGTTGGGATTGGCTCATTATCTTATCAGTTATTTGAATTTGATTTAAGGGGATTGTGATAT GGGTGTAGATGACTAGATGGATTGTATCTTATCTAATGGGTTTAGATAAGACTCAATCTTATCTTATCTTATGGGTTTAG ATAAGATTATATCTTATCGGTTAAGATTATCTTATATTGTAATACTAGAGTTAGTAGTATCCTATAAATAGATAAGGCCC CTAACCCTAAAAGGTGTGCTAGTGTGCGCCAGGTAGGGGTGTTCATAACCGAACCAATCCAAACAAAACCGACAAACCGA TCCAAAAAAACCGAAATCCAATCAAACCGAAAACCGAACGGACTGAAAATTGAAAAAACCGAAATTATTTATTGGATCGG ATCGGATTTCGGATTTGATTTCCAAAACCGAACCAATCCAATCCAAACCGAACATTCACAAATATGTATACTTTTAGTTA TACATATATCATTCCATTTACACTTACATAGTACATATTTATTGTATATATATTGATTATATCACACATGCATCAAAGTT TACTATATACATGCATCAAAGTAAACAATTATAATCATAATTTTAAAATATGTTGACTATGTTATAATTTATGAATGTTA TATTAATGTTATAAATTATGTATCATTTTATTTATCATATATTATATATTTTTAAAATTTATACAACACAATTTCAAAGT ATAAAAAAGTGAAACAAAAACCGAACAATCCAATCCAATCCAAACCGCTATAGATTGGATCGGATTGGTTCGGATTTGAA TTTAGTAAAAAATCCATTGGATGACAAAATCATAAAACCGATGAGATCGGATCGGATGATTTTTCTCCTCAAAACCGATC CAATCCAATCCGCGAACACCCCTAGCGCCAGGTGTGTGCGGAGTGCGCCGCAATTGGGCGGTGTGCAAGTGCGCCGCAAC ATGGCGGTGTGCGAGGGTACACGACAATTGGGCAGTTGAGAGAAACTGCTATTGCAGATGTGTGAGACAATTAGGCAGTT GAGAGAAATTGCTATTGTAAACACAATTGATTATTGATAATCAATAAAGGGGGCTATAGCTACTCTATAGCCGCAGAGGT AGGCTTAATTGGCCGAACTGCGTGAACAAAGATTCTGTGTGGTTTATTCGTGCTTTCTCGCTCTATCGTACTGTCTGAAT CAAGTTGTGCCTTTTTTTCCTCAACATGTGTTAATTTTGAATTGACGAGACAAGAATAGTGGCAGAAAAGAGTGAGTGAG ACAATTTGGATCCATGGCATATATAGTTGTATGTTTTTGATTTTCTTTCCTGATTACATTACAGAGACACTGGTCTTAGA GTTCAGGCAATATCCTCCCGGGAACAGCAAGAGACGAGCAAAGATACCGAGACATAAGAATGGGAGAGATGAAGACCAAG ATATCGGATTCTTTGGAGGAATTAGAAAGCTTCGGAGTGAAGATGAAAATTGAAAAATGGAAGGAGAATTTGGGCCTCAT GATCTAGCTTTGTTCACAAACCAAAACTTTGCATTTCAATATATTTTATTATCGGTAATGATTGTTAAATTTTTATAAAC AAAACGCTTGAAATGAATTATGGACTCAGAATACCAATCCAATCATGTATGGTTACTCCTTTATGGCTTTATGTGATTTT CTCCACCACTTAGCTGTTCTTGTATTTTGTCTGAGAATGCTTTATAATGCGTATTATTACTGTTTTATTTTTCCTTGAAC
CDS sequence (LotjaGi1g1v0663200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAACACTGAAAAACGTGGTAACATGATCTCTCTCTTGAATTTGCCTGAACCCATTCTGGATTGCATCCTCAAACG CCTCTCACCAACCGAACTCATCAAAATGTCAGTGGTGTGCACTTGTTTAAAGGATGCATGTCGAAGTGATCATTTATGGC AAAACCTCTTCCAACAAAAATGGGGTACAATCATTGGTGATTTTGCTTTCAAGGAATGGCAATGGCACATTGCAAAATTC AAGTCAGAAGAAGAAAACCTCTTCAATCAAAACATAAATCAAAATGGGTCACTTGGGTCTTTGTCTTTCTGTGGTGGCGC TTGGCCTAAATTATGCCTTAACTCATATTTGGAAGATTGTAGCCATCTTCAGAGCTTCTTGTCAAATAAATTCATGATTG CTCTTTATTTGGAGACTGGCAAGTTCCGGTTTCCAGCTCAAGTATACAGGGGCACACTTGTTTCTGATTGCATATTTAGC TATGACTCCAAAAGTGATACCTTTGTAGCAAGGGAACGAGGCGGGGGATGGCTGATTATGGGGCGTAATATCGGCTGGGA AAAGCTGAGACGTTCCTCGGTTGAAACCCCTCCATGTGTTCGTTACGTCTCTGATTGTTTGGAAGACTTAAAGCCCGGTG ATCATATTGAGATCCAATGCAAGCTAATGGTTGAAACTCATTATGATTGGTGGTATGCTGTTATTGGTCACTTGGACTCA TCACTCATGTAA
Protein sequence (LotjaGi1g1v0663200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNTEKRGNMISLLNLPEPILDCILKRLSPTELIKMSVVCTCLKDACRSDHLWQNLFQQKWGTIIGDFAFKEWQWHIAKF KSEEENLFNQNINQNGSLGSLSFCGGAWPKLCLNSYLEDCSHLQSFLSNKFMIALYLETGKFRFPAQVYRGTLVSDCIFS YDSKSDTFVARERGGGWLIMGRNIGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLDS SLM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 95 | 93 | 3.8E-9 | – | |
| PANTHER | 6 | 240 | 235 | 1.1E-108 | – | |
| PANTHER | 6 | 240 | 235 | 1.1E-108 | – | |
| SUPERFAMILY | 7 | 70 | 64 | 1.09E-13 | ||
| ProSiteProfiles | 10 | 56 | 47 | 13.71 | ||
| Pfam | 12 | 55 | 44 | 5.7E-9 | ||
| SMART | 16 | 56 | 41 | 5.1E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0663200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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