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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0666200 |
| Transcript ID | LotjaGi1g1v0666200.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant protein 1589 of unknown function; TAIR: AT3G10250.1 histidine-tRNA ligase; Swiss-Prot: sp|Q3TN34|MILK2_MOUSE MICAL-like protein 2; TrEMBL-Plants: tr|A0A1J7IF97|A0A1J7IF97_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0666200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:122838228..122845047) extracted from Lotus japonicus Gifu genome v1.2.
GATAATTTCCACCCGTAGAAGCGCGCACAGCAGAGTTGAGCTCTGTCTGTATCTTTCGTCCTTTCCCATTCTCCAAAATC AGGTCAACTTCAAATCCCTAATCTCTCTCTCTCTCTCTCTCTGTGCCCCCAATCGTACGTTAACGTAACTGCTTTTCCCT CCAATTTTTCATTGATTTCACTTTTCTCTCGCGTTTCTTGATTCTGATCATAGGGTTTTCTGATCCCAATTTTTGATCCC ACTCTCTTCACTTAGTATGATCAATCCCTCTATTCAATTTTGTTTCAATTTTTATTTTCATGCTTTGTTTCTTTCGAAGT AGGAATCTTTGAATTTGTTACGATTTGCATTTGCTACTCTGCATTTTTTTCTCACAAGTATGGTTTCTGATCATCAATTA TGGTTCTGCTTTGTGAATTTTACTCTAATTGATGGAGTGAAGTACCATCACTGATCATCAATTCTGGTTCTGCAGGTAGT TGTTAACACTACAGAGTGTTTTGAAAGCTTCCGTTATGCCAAGCGGACCAGGCGAACCGGGCGGACCGGTGAGACAGGTT TCCTGTCAAGATATTCAGCTGGTAAGCTGGGAACTCTGTCCCTCTTTCTCTCTTTTATAAAAGTTTGATGTATTATGTGA ATACTTGATGAGTTCTTTTATTTGTTCACATTTCTTCATTGTTGCTCTGGAATATAATTAATTTTTGTTGACTGCGTAAC CAAACATTATAATTATCTTCATTTTAAAATTTGTTGTCTTTGTAAAAACTAATGGGATATCATTAAGGTGTACTGGTTTT GGATTTCGGATATATGTATAATTTGCATGGATTGATAACATAGTAGTCAATCGCGGATTGCGGCTTGTCGCGGATGACCC CCAAAAATGAAATCCCATTTAAGGGAAGGCTGCTATTGGCCGCGAATAGCGGGATTTCGGGGCCACGATCTCATCGCGGC AGGGGTCCGCTACGCGACACAAGCTATTGCTCTGACTAGGCTATTTAGGGTTTAAGTACTTTTGGATGTTGATTGAACAA GGTTTTTATTTTTAATTAATAGTTGGGAAGACCTGACTGTCTAGTTGGGTAATTAGTATGACTTGTTAGACTTTGGCTAA GGATTACTATGCTCTTTGATTTGTCAGAACATCATTTTGAATTTAAATCTTCACCGTTTAGTTGTTATGCCCCCCCACCC TAATTATCTTCACTGCTACCTCTACTGTTCATTTCGTATACACAAGAGATTGCTTACCACAATTTTTTCTGGTTTACTCG CCTCACTGCAGGTGCAAAATCTCATAGAACGATGTTTACAACTGTATATGAGTCGGCAAGAAGTTGTGGACAAATTAGTA TGTCAAGCAAAAATAGAGCCCAGTTTCACTGAACTAGGTAATAATTTTTTTTTGTTATCTGACAGATTTTTTTTTCCCAC TTTTATTTTAGTGCTCCTTCAATTGGCCGTGTACCCTACGTGATCTAAAATTGTTGAATTTTAGTTTATTTACATTTATA ATATTTTTCATTTCATTCTAGATGTTATGTTCTGCTTTTATATCTGTGGTTGTCAAACTTACTGTTCTGAACAAGACATG GCTTCCTGAAGTATAATTAAGGTCTGAATTTGGAGCGTAATTATAGTAGAGCCTGTCAGGAATCCTTTTAGATGTGCATA TTTTGACTGTATGAATGTATGATTATAGTAAAGAATTGGCGGAATGAAAATGGTTTAGTTTGTGTCCTCCTCAACCTCAA CCCTTACTGAATAAAAAGAAAAAAGATAATGAGGAATTAATATCTTTTTTTCTTCTTATGGTTGGAATTGTGAGCATCAC TTTTAAGGGGGCCTCTTACTCTCTTTTCCCTTACATATGTTGTGGGATGGGATCATTTTTATCATATCTCTTATTTTCTG ACATGTTTACTTATTAGCATATATATATATATATATTTGTTTTGATAAGCCTACTTATTAGCATATTAGCATACTCCCAT TATTGCCTTTGACATGGTTGGTTCATTTCTTACTGTAGTTAATTTATGTTTGTATTTATTCTATGGTTTAATATTTTGAC TTCCCAGACAAAGAAAATAGTTCACTTTTCAATAAGATAAACCAAAACTTGAAATCTTTGTAATGGTACTTCATGTGATT ACTTGTTTAGCTGCTGCTGCAACTAGCAGTTTCATTTTATGTGCCTTTGTTCATCGAACAGTGTTTTTCCATTTCTTTTC TTATAGAAACCATAGTATTTTTTATACTTACGAAGTGCGTAATCATGGTTTCTGTGGAAATTGCTACTTATTACTGCTTA TTGGCATTGAAGTAAAAAACCAACAGTCCTTGCACCCATCTCTCGGTGTTCTCTATTTCTAAGTCTTTTTCCCCCTCATT TTTTCAGTTTGGCAAAAGCTTGAGGAAGAAAATGAAGAATTCTTCCGAGCTTATTATACAAGATTGATGTTAAAGCAGCA AATAGTGGAATTCAACAGATTGCTGGATCAACAGTTGCATTTAATGCACTCAAACTCACTATCTGCCTCTAATGGGTCAC ATAACCCTGCAGTTGCATCACTACCTGCCTCTAATGGATCACATATCTCTGCGGTTTCATCACTGTCCAACTCTAATGGG TCACATATCCCCACAAGTAAGTTTGTTACTTTGTTACCTCCATGACTATTGTTATCATCACGTTGTGCTAGATTTTTTTC AGTAGTATTAACTATCAAGTCCATGGGGGGGGGGGGGGTTTCATATCAAGGGCTGTTAATGGTCTCCTTAGGTCCTTTCT CGCACTTAGACTCACCACCCTATTATTTTTCCAATGCACGATGTCCTTGGTTGTTGTATTTAAGGCATGATAAATATCTA AATGGGTTAATAAGTTCAATTAGTGCATTCAAACTCACTACCTGCTGCTAATGGGTCACATATCCATGCAGTTTCATCAC TACCTGCCTCTAATGGGTCACATATCCCTGCAGTTTCATCACTGCCCAACTCTAATGGGTCACATATCCCCACAAGTAAG TTTGTTACTTCTTTACCTCCCTGAATATTGTTAGTATCTCATTGGGCTAGATTTTATCAGTGATATCAAGTCTGTGGGAG AGGGTTTTTCTTATCAAGGGCAATTCATGGGCTCATTAGGTCCCTTTCTTACACTTTGACTCAAACCCCATTATTTTTCT AATGCACAATGTCGTAGTTGTTGTATTTAAGGCATGATAAAAATCTAATGGGTTAAAAAATTGAAATTAATGCACCCAAA CTTACTACTTGCTTCTAATGAGTCACATATCCTTGCAGTTGCATCACTACCTGCTTCTAATGGTTCACAAATCCCTGCAG TTTCATCACTGCCCAACTCCAATGGGTCACATATCACTGCAGTTTCATCACTGCCCATCTCTAATGGATCACATATCCCC AGAAGTAAGTTTGTTACTTTGTTATTTCCATGAATATTGTTACTATCATGTTGGGCTAGATTTTTTTCAGTGTATTAAGT CTATGGGAGTGTTTTTCTCATCAATGTTCTGGTTGTTGTTTTCATGGCATGATAAATATCTAATGGGATGAAAAATTGCA TTTAGTGCACTCAAATTCACTACGTGCCTCTAATGGGTCATATATTCCTGCAGTTCCCTCACTGCTCAACTCTAATGGGT CACATATCACTGCAGTTTCATCACTGCCCAACTCTAATGGGTCACATATCCCCACAAGTAAGTTTCTTACTTTTTACCTC CATGAATATTGCTACCATCATGTTGTGCTAGATTCTTTTCAGTAGTATCAAGTCTATGGGAGGGTTTTTCTTATCAAGGG CAAGAATCGAACTGTTGTTGCAAGGTCTATGTTTTTCATAGATTGTCCATGAATATTGCTACCATCATGTTTTTCTTATC ATAATTAGAGTATCGTGCTATGACTAATGCTATGTGTTAACTGTTGTGGTTAAAACATTTGCTTCAAGAGTTGAGTTTTG TGAGATAGGGCCTATGGAGCTTGCTTGTTATAATCAGTCAGCTTTGTATCTTCTCAAATCAATTTTCCATGAGAGGACCA AACATATTGAGGTCAATTTCCATTTCATCGGAGAGAAGATCCTCTTAGGCGTAATTAAGACTCCCTATGTGTATACTAAG GATCAGCTCGCAGATATGTTAACTAAGTCTTTACGGGTCCTAGGATAATATATATATATATATCTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAACAAGCAGGATACATCTGATATATATGCTCCAGCTTTAGGGGGAGTGTTG AATATTTGTTATTTATATTAGCATAATCCTATAAAACTAAGGATTGAGTTTGTTAATTTTTTTTCTCTATTTTATATTTG TATTATCCCATCAAAATAGGGGTAGAATTAGATTTGATTTAGGAATTATCTCTTTGTTCTATCTATAAATTGTACAAATC ATATTGATGATATAGAGAGAAAATATTTCTCCGGTTTCAGTAATAACAATAGTTTCTTTCAATTTTAATCCTGGGTTCCT AACATTTCTCTCCTTGAACATGGTGGGGTAGATTGAAAGGCTTCGGTTATACAAACTTTATGACCCGTTTCTGCCTATAT TCTTGTAACTTCTGTGATGGCATTTTAGAGAAATCAAATGTAGATTTTTCTGTTCCAAAGACATAATAATAACAAGATTT AGTGATTGAGGAGATAAACATATGAAAAAAGTTCTCGGATTTATTATTCTAAGCTTGTTATTGAATGTTCGATTTCAATT ATTTTTGTTCTTTGGCATTCAATATCACTATATTTTACAGGACATGAGAACCCCACATGCTACTCTGCTGAGCGACCCCA ACCAGATTTGATGTCAGAAAATATGCAGCATAGTGTTAATTCCAGATTATCTAATACGTTTAATAATGGCGGGCCATCAC TCCATACTCGTATGCATACTGTGGTTGATATGTCTTCTCATGGCATTGGGATTAATGGCTCTCCAAGCATGCTTTCTGCT CAGAACTCAAACTTGGGTATGATGCAAGGAATCAATGGGGGCATGATCAAATTAGAACCTGGATATTCAGATTGTTCCTA CATGTTTAGTACTGGGGGAAATGTCCCGACTCGCCCAAACACCGCTGATGCTTCAGTTACATCATTCACTAATGTTGCGC CCAACGCACATGCTGTGAATGATGCAGTTCTGGAAACAGACTCTTCATTTGGATTTTTGGGACAGATTCCTAGAAATTTT AGCCTTTCAGATCTAACTGCTGATTTTTCTTTGAGTTCTGGTATGTTCTCTCATGTTTCTGTGGGGGTGTGTGTGTGTGC ATACTTGCTCACCCATATTGTTAGTGATCAGTGCTTATTTTCTGATGTTAAATCAAATGTCGGTCAAAGTTATGGTTTGT GTTGATTGTTTGTCTATCTACATTTTAGGCTATTACATAAAAGTGTTTCTAGACTCTATTAATCATTAGCACTAATAGTT CAGTTTCTTATTTGACAGATATACTGGACAGCTATTCTAGGTCACCATTTCTACCCACTGATAATAACTTCCTTGAGAAA GTAGAGCAAGGTAGGACACAATCTTGCTACCCTATAGTCTGTTGATTTATGCTGGAATGCTGACACTCCTGTTGTCTTTG TGCTAATATAGATAACAATAGGCTGGACTCCATATCAGAAGGCCTAAGTCATGAAGACTTTGGGAGTGAATAGATGATAC TCATTATTTGGTAATCATCAACCTTGAGATATGTTCTTTACTTTAATTCTTAGGGGTCAAATTAAGCTAGAACTTTCATA AATTACAAAGCTCTAAGCATGAATACTCCATTTTGGAGATGTTGTATCCTATTTTCCCTACCTAGGCCCGTCCATGCTAC ATATATAATCATATTCTATATATTTATAGATTACCCATGCCCTCGCAGTGTAGAGTTCAATTAAATAAAGATATGGTTTT TAATTTTATTGCATGCATACTTATTTACAAAAAAATAACCGTTTTAATTGTTTATGTTACTTGCAGGTTGAACAAAGTGC TTATCATGGAAACTCTGTACATAAGAATTTTAGAGGTTTTGAAATCTTAATGCTAGGATGAACGTATACTTCGGTGTGTA GAGTTCACACACCTCCTGCAATGGTGGATAATAAAATTTGGGATGCTTGTGTAGAAGGGAAAAGAACCTTGCAAATAAAT AGTTAACCTTTTCTCTCTTGGCCTTTTGGAATTTTGCCCTGTAGACTGATTTCACTTATTCTGCATTGTGTTGATGCTAG AATTGTGTGTTTAGTTGCTTTTCTTGAGATTTTGGCTGCATAAAATACTGGTTTTTTAAGTACTAAGAAGAAAAACTATA CTTGTTTGGCTCCAATGCCCTCATTCAACTTGCTAAGGGAAACATTTTTCTGATGCCAACTCTGTACAAGTCTACAAGTA GAGAATGTTGAGATTAAGCAGGCACAACTTGATTCAGACAGTACGATAGAGCGAGAAAGCACGAATAAACGACACATAAA ACTTTGTTCACGCAGTTCGGCCAATTGTGCCTACCTCTGTGGCTATAGAGTAGCTATAGCTTCCTTTATTGATTCTCAAT CATCAATTGTGTTTACAATAGCAGTTTCTATTGTTATGTGCCCTTGCACACCGCCAAATTGCGGCGCACTTGCACACCAC CAAATTGTGGCGCACTCCGCACACACCTAGTGCACACTAGCACACTTTTAGGGTTAGGGGCTTTATCTATTCATAGGACA CTACTAACTCTAGTATTACA
CDS sequence (LotjaGi1g1v0666200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAGCGGACCAGGCGAACCGGGCGGACCGGTGAGACAGGTTTCCTGTCAAGATATTCAGCTGGTGCAAAATCTCAT AGAACGATGTTTACAACTGTATATGAGTCGGCAAGAAGTTGTGGACAAATTAGTATGTCAAGCAAAAATAGAGCCCAGTT TCACTGAACTAGTTTGGCAAAAGCTTGAGGAAGAAAATGAAGAATTCTTCCGAGCTTATTATACAAGATTGATGTTAAAG CAGCAAATAGTGGAATTCAACAGATTGCTGGATCAACAGTTGCATTTAATGCACTCAAACTCACTATCTGCCTCTAATGG GTCACATAACCCTGCAGTTGCATCACTACCTGCCTCTAATGGATCACATATCTCTGCGGTTTCATCACTGTCCAACTCTA ATGGGTCACATATCCCCACAATTGCATCACTACCTGCTTCTAATGGTTCACAAATCCCTGCAGTTTCATCACTGCCCAAC TCCAATGGGTCACATATCACTGCAGTTTCATCACTGCCCATCTCTAATGGATCACATATCCCCAGAATTCCCTCACTGCT CAACTCTAATGGGTCACATATCACTGCAGTTTCATCACTGCCCAACTCTAATGGGTCACATATCCCCACAAGACATGAGA ACCCCACATGCTACTCTGCTGAGCGACCCCAACCAGATTTGATGTCAGAAAATATGCAGCATAGTGTTAATTCCAGATTA TCTAATACGTTTAATAATGGCGGGCCATCACTCCATACTCGTATGCATACTGTGGTTGATATGTCTTCTCATGGCATTGG GATTAATGGCTCTCCAAGCATGCTTTCTGCTCAGAACTCAAACTTGGGTATGATGCAAGGAATCAATGGGGGCATGATCA AATTAGAACCTGGATATTCAGATTGTTCCTACATGTTTAGTACTGGGGGAAATGTCCCGACTCGCCCAAACACCGCTGAT GCTTCAGTTACATCATTCACTAATGTTGCGCCCAACGCACATGCTGTGAATGATGCAGTTCTGGAAACAGACTCTTCATT TGGATTTTTGGGACAGATTCCTAGAAATTTTAGCCTTTCAGATCTAACTGCTGATTTTTCTTTGAGTTCTGATATACTGG ACAGCTATTCTAGGTCACCATTTCTACCCACTGATAATAACTTCCTTGAGAAAGTAGAGCAAGATAACAATAGGCTGGAC TCCATATCAGAAGGCCTAAGTCATGAAGACTTTGGGAGTGAATAG
Protein sequence (LotjaGi1g1v0666200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSGPGEPGGPVRQVSCQDIQLVQNLIERCLQLYMSRQEVVDKLVCQAKIEPSFTELVWQKLEEENEEFFRAYYTRLMLK QQIVEFNRLLDQQLHLMHSNSLSASNGSHNPAVASLPASNGSHISAVSSLSNSNGSHIPTIASLPASNGSQIPAVSSLPN SNGSHITAVSSLPISNGSHIPRIPSLLNSNGSHITAVSSLPNSNGSHIPTRHENPTCYSAERPQPDLMSENMQHSVNSRL SNTFNNGGPSLHTRMHTVVDMSSHGIGINGSPSMLSAQNSNLGMMQGINGGMIKLEPGYSDCSYMFSTGGNVPTRPNTAD ASVTSFTNVAPNAHAVNDAVLETDSSFGFLGQIPRNFSLSDLTADFSLSSDILDSYSRSPFLPTDNNFLEKVEQDNNRLD SISEGLSHEDFGSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 175 | 168 | 1.1E-107 | – | |
| PANTHER | 8 | 175 | 168 | 1.1E-107 | ||
| TIGRFAM | 20 | 76 | 57 | 1.9E-25 | ||
| Pfam | 23 | 75 | 53 | 2.0E-25 | ||
| PANTHER | 192 | 391 | 200 | 1.1E-107 | – | |
| PANTHER | 192 | 391 | 200 | 1.1E-107 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0666200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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