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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0666200 |
| Transcript ID | LotjaGi1g1v0666200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant protein 1589 of unknown function; TAIR: AT3G10250.1 histidine-tRNA ligase; Swiss-Prot: sp|A0JME2|MCAF1_DANRE Activating transcription factor 7-interacting protein 1; TrEMBL-Plants: tr|A0A1J7IF97|A0A1J7IF97_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0666200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:122838675..122844821) extracted from Lotus japonicus Gifu genome v1.2.
CAATTTTTGATCCCACTCTCTTCACTTAGTATGATCAATCCCTCTATTCAATTTTGTTTCAATTTTTATTTTCATGCTTT GTTTCTTTCGAAGTAGGAATCTTTGAATTTGTTACGATTTGCATTTGCTACTCTGCATTTTTTTCTCACAAGTATGGTTT CTGATCATCAATTATGGTTCTGCTTTGTGAATTTTACTCTAATTGATGGAGTGAAGTACCATCACTGATCATCAATTCTG GTTCTGCAGGTAGTTGTTAACACTACAGAGTGTTTTGAAAGCTTCCGTTATGCCAAGCGGACCAGGCGAACCGGGCGGAC CGGTGAGACAGGTTTCCTGTCAAGATATTCAGCTGGTAAGCTGGGAACTCTGTCCCTCTTTCTCTCTTTTATAAAAGTTT GATGTATTATGTGAATACTTGATGAGTTCTTTTATTTGTTCACATTTCTTCATTGTTGCTCTGGAATATAATTAATTTTT GTTGACTGCGTAACCAAACATTATAATTATCTTCATTTTAAAATTTGTTGTCTTTGTAAAAACTAATGGGATATCATTAA GGTGTACTGGTTTTGGATTTCGGATATATGTATAATTTGCATGGATTGATAACATAGTAGTCAATCGCGGATTGCGGCTT GTCGCGGATGACCCCCAAAAATGAAATCCCATTTAAGGGAAGGCTGCTATTGGCCGCGAATAGCGGGATTTCGGGGCCAC GATCTCATCGCGGCAGGGGTCCGCTACGCGACACAAGCTATTGCTCTGACTAGGCTATTTAGGGTTTAAGTACTTTTGGA TGTTGATTGAACAAGGTTTTTATTTTTAATTAATAGTTGGGAAGACCTGACTGTCTAGTTGGGTAATTAGTATGACTTGT TAGACTTTGGCTAAGGATTACTATGCTCTTTGATTTGTCAGAACATCATTTTGAATTTAAATCTTCACCGTTTAGTTGTT ATGCCCCCCCACCCTAATTATCTTCACTGCTACCTCTACTGTTCATTTCGTATACACAAGAGATTGCTTACCACAATTTT TTCTGGTTTACTCGCCTCACTGCAGGTGCAAAATCTCATAGAACGATGTTTACAACTGTATATGAGTCGGCAAGAAGTTG TGGACAAATTAGTATGTCAAGCAAAAATAGAGCCCAGTTTCACTGAACTAGGTAATAATTTTTTTTTGTTATCTGACAGA TTTTTTTTTCCCACTTTTATTTTAGTGCTCCTTCAATTGGCCGTGTACCCTACGTGATCTAAAATTGTTGAATTTTAGTT TATTTACATTTATAATATTTTTCATTTCATTCTAGATGTTATGTTCTGCTTTTATATCTGTGGTTGTCAAACTTACTGTT CTGAACAAGACATGGCTTCCTGAAGTATAATTAAGGTCTGAATTTGGAGCGTAATTATAGTAGAGCCTGTCAGGAATCCT TTTAGATGTGCATATTTTGACTGTATGAATGTATGATTATAGTAAAGAATTGGCGGAATGAAAATGGTTTAGTTTGTGTC CTCCTCAACCTCAACCCTTACTGAATAAAAAGAAAAAAGATAATGAGGAATTAATATCTTTTTTTCTTCTTATGGTTGGA ATTGTGAGCATCACTTTTAAGGGGGCCTCTTACTCTCTTTTCCCTTACATATGTTGTGGGATGGGATCATTTTTATCATA TCTCTTATTTTCTGACATGTTTACTTATTAGCATATATATATATATATATTTGTTTTGATAAGCCTACTTATTAGCATAT TAGCATACTCCCATTATTGCCTTTGACATGGTTGGTTCATTTCTTACTGTAGTTAATTTATGTTTGTATTTATTCTATGG TTTAATATTTTGACTTCCCAGACAAAGAAAATAGTTCACTTTTCAATAAGATAAACCAAAACTTGAAATCTTTGTAATGG TACTTCATGTGATTACTTGTTTAGCTGCTGCTGCAACTAGCAGTTTCATTTTATGTGCCTTTGTTCATCGAACAGTGTTT TTCCATTTCTTTTCTTATAGAAACCATAGTATTTTTTATACTTACGAAGTGCGTAATCATGGTTTCTGTGGAAATTGCTA CTTATTACTGCTTATTGGCATTGAAGTAAAAAACCAACAGTCCTTGCACCCATCTCTCGGTGTTCTCTATTTCTAAGTCT TTTTCCCCCTCATTTTTTCAGTTTGGCAAAAGCTTGAGGAAGAAAATGAAGAATTCTTCCGAGCTTATTATACAAGATTG ATGTTAAAGCAGCAAATAGTGGAATTCAACAGATTGCTGGATCAACAGTTGCATTTAATGCACTCAAACTCACTATCTGC CTCTAATGGGTCACATAACCCTGCAGTTGCATCACTACCTGCCTCTAATGGATCACATATCTCTGCGGTTTCATCACTGT CCAACTCTAATGGGTCACATATCCCCACAAGTAAGTTTGTTACTTTGTTACCTCCATGACTATTGTTATCATCACGTTGT GCTAGATTTTTTTCAGTAGTATTAACTATCAAGTCCATGGGGGGGGGGGGGGTTTCATATCAAGGGCTGTTAATGGTCTC CTTAGGTCCTTTCTCGCACTTAGACTCACCACCCTATTATTTTTCCAATGCACGATGTCCTTGGTTGTTGTATTTAAGGC ATGATAAATATCTAAATGGGTTAATAAGTTCAATTAGTGCATTCAAACTCACTACCTGCTGCTAATGGGTCACATATCCA TGCAGTTTCATCACTACCTGCCTCTAATGGGTCACATATCCCTGCAGTTTCATCACTGCCCAACTCTAATGGGTCACATA TCCCCACAAGTAAGTTTGTTACTTCTTTACCTCCCTGAATATTGTTAGTATCTCATTGGGCTAGATTTTATCAGTGATAT CAAGTCTGTGGGAGAGGGTTTTTCTTATCAAGGGCAATTCATGGGCTCATTAGGTCCCTTTCTTACACTTTGACTCAAAC CCCATTATTTTTCTAATGCACAATGTCGTAGTTGTTGTATTTAAGGCATGATAAAAATCTAATGGGTTAAAAAATTGAAA TTAATGCACCCAAACTTACTACTTGCTTCTAATGAGTCACATATCCTTGCAGTTGCATCACTACCTGCTTCTAATGGTTC ACAAATCCCTGCAGTTTCATCACTGCCCAACTCCAATGGGTCACATATCACTGCAGTTTCATCACTGCCCATCTCTAATG GATCACATATCCCCAGAAGTAAGTTTGTTACTTTGTTATTTCCATGAATATTGTTACTATCATGTTGGGCTAGATTTTTT TCAGTGTATTAAGTCTATGGGAGTGTTTTTCTCATCAATGTTCTGGTTGTTGTTTTCATGGCATGATAAATATCTAATGG GATGAAAAATTGCATTTAGTGCACTCAAATTCACTACGTGCCTCTAATGGGTCATATATTCCTGCAGTTCCCTCACTGCT CAACTCTAATGGGTCACATATCACTGCAGTTTCATCACTGCCCAACTCTAATGGGTCACATATCCCCACAAGTAAGTTTC TTACTTTTTACCTCCATGAATATTGCTACCATCATGTTGTGCTAGATTCTTTTCAGTAGTATCAAGTCTATGGGAGGGTT TTTCTTATCAAGGGCAAGAATCGAACTGTTGTTGCAAGGTCTATGTTTTTCATAGATTGTCCATGAATATTGCTACCATC ATGTTTTTCTTATCATAATTAGAGTATCGTGCTATGACTAATGCTATGTGTTAACTGTTGTGGTTAAAACATTTGCTTCA AGAGTTGAGTTTTGTGAGATAGGGCCTATGGAGCTTGCTTGTTATAATCAGTCAGCTTTGTATCTTCTCAAATCAATTTT CCATGAGAGGACCAAACATATTGAGGTCAATTTCCATTTCATCGGAGAGAAGATCCTCTTAGGCGTAATTAAGACTCCCT ATGTGTATACTAAGGATCAGCTCGCAGATATGTTAACTAAGTCTTTACGGGTCCTAGGATAATATATATATATATATCTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAACAAGCAGGATACATCTGATATATATGCTCCAGCTT TAGGGGGAGTGTTGAATATTTGTTATTTATATTAGCATAATCCTATAAAACTAAGGATTGAGTTTGTTAATTTTTTTTCT CTATTTTATATTTGTATTATCCCATCAAAATAGGGGTAGAATTAGATTTGATTTAGGAATTATCTCTTTGTTCTATCTAT AAATTGTACAAATCATATTGATGATATAGAGAGAAAATATTTCTCCGGTTTCAGTAATAACAATAGTTTCTTTCAATTTT AATCCTGGGTTCCTAACATTTCTCTCCTTGAACATGGTGGGGTAGATTGAAAGGCTTCGGTTATACAAACTTTATGACCC GTTTCTGCCTATATTCTTGTAACTTCTGTGATGGCATTTTAGAGAAATCAAATGTAGATTTTTCTGTTCCAAAGACATAA TAATAACAAGATTTAGTGATTGAGGAGATAAACATATGAAAAAAGTTCTCGGATTTATTATTCTAAGCTTGTTATTGAAT GTTCGATTTCAATTATTTTTGTTCTTTGGCATTCAATATCACTATATTTTACAGGACATGAGAACCCCACATGCTACTCT GCTGAGCGACCCCAACCAGATTTGATGTCAGAAAATATGCAGCATAGTGTTAATTCCAGATTATCTAATACGTTTAATAA TGGCGGGCCATCACTCCATACTCGTATGCATACTGTGGTTGATATGTCTTCTCATGGCATTGGGATTAATGGCTCTCCAA GCATGCTTTCTGCTCAGAACTCAAACTTGGGTATGATGCAAGGAATCAATGGGGGCATGATCAAATTAGAACCTGGATAT TCAGATTGTTCCTACATGTTTAGTACTGGGGGAAATGTCCCGACTCGCCCAAACACCGCTGATGCTTCAGTTACATCATT CACTAATGTTGCGCCCAACGCACATGCTGTGAATGATGCAGTTCTGGAAACAGACTCTTCATTTGGATTTTTGGGACAGA TTCCTAGAAATTTTAGCCTTTCAGATCTAACTGCTGATTTTTCTTTGAGTTCTGGTATGTTCTCTCATGTTTCTGTGGGG GTGTGTGTGTGTGCATACTTGCTCACCCATATTGTTAGTGATCAGTGCTTATTTTCTGATGTTAAATCAAATGTCGGTCA AAGTTATGGTTTGTGTTGATTGTTTGTCTATCTACATTTTAGGCTATTACATAAAAGTGTTTCTAGACTCTATTAATCAT TAGCACTAATAGTTCAGTTTCTTATTTGACAGATATACTGGACAGCTATTCTAGGTCACCATTTCTACCCACTGATAATA ACTTCCTTGAGAAAGTAGAGCAAGGTAGGACACAATCTTGCTACCCTATAGTCTGTTGATTTATGCTGGAATGCTGACAC TCCTGTTGTCTTTGTGCTAATATAGATAACAATAGGCTGGACTCCATATCAGAAGGCCTAAGTCATGAAGACTTTGGGAG TGAATAGATGATACTCATTATTTGGTAATCATCAACCTTGAGATATGTTCTTTACTTTAATTCTTAGGGGTCAAATTAAG CTAGAACTTTCATAAATTACAAAGCTCTAAGCATGAATACTCCATTTTGGAGATGTTGTATCCTATTTTCCCTACCTAGG CCCGTCCATGCTACATATATAATCATATTCTATATATTTATAGATTACCCATGCCCTCGCAGTGTAGAGTTCAATTAAAT AAAGATATGGTTTTTAATTTTATTGCATGCATACTTATTTACAAAAAAATAACCGTTTTAATTGTTTATGTTACTTGCAG GTTGAACAAAGTGCTTATCATGGAAACTCTGTACATAAGAATTTTAGAGGTTTTGAAATCTTAATGCTAGGATGAACGTA TACTTCGGTGTGTAGAGTTCACACACCTCCTGCAATGGTGGATAATAAAATTTGGGATGCTTGTGTAGAAGGGAAAAGAA CCTTGCAAATAAATAGTTAACCTTTTCTCTCTTGGCCTTTTGGAATTTTGCCCTGTAGACTGATTTCACTTATTCTGCAT TGTGTTGATGCTAGAATTGTGTGTTTAGTTGCTTTTCTTGAGATTTTGGCTGCATAAAATACTGGTT
CDS sequence (LotjaGi1g1v0666200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAGCGGACCAGGCGAACCGGGCGGACCGGTGAGACAGGTTTCCTGTCAAGATATTCAGCTGGTGCAAAATCTCAT AGAACGATGTTTACAACTGTATATGAGTCGGCAAGAAGTTGTGGACAAATTAGTATGTCAAGCAAAAATAGAGCCCAGTT TCACTGAACTAGTTTGGCAAAAGCTTGAGGAAGAAAATGAAGAATTCTTCCGAGCTTATTATACAAGATTGATGTTAAAG CAGCAAATAGTGGAATTCAACAGATTGCTGGATCAACAGTTGCATTTAATGCACTCAAACTCACTATCTGCCTCTAATGG GTCACATAACCCTGCAGTTGCATCACTACCTGCCTCTAATGGATCACATATCTCTGCGGTTTCATCACTGTCCAACTCTA ATGGGTCACATATCCCCACAATTTCATCACTGCCCAACTCCAATGGGTCACATATCACTGCAGTTTCATCACTGCCCATC TCTAATGGATCACATATCCCCAGAATTCCCTCACTGCTCAACTCTAATGGGTCACATATCACTGCAGTTTCATCACTGCC CAACTCTAATGGGTCACATATCCCCACAAGACATGAGAACCCCACATGCTACTCTGCTGAGCGACCCCAACCAGATTTGA TGTCAGAAAATATGCAGCATAGTGTTAATTCCAGATTATCTAATACGTTTAATAATGGCGGGCCATCACTCCATACTCGT ATGCATACTGTGGTTGATATGTCTTCTCATGGCATTGGGATTAATGGCTCTCCAAGCATGCTTTCTGCTCAGAACTCAAA CTTGGGTATGATGCAAGGAATCAATGGGGGCATGATCAAATTAGAACCTGGATATTCAGATTGTTCCTACATGTTTAGTA CTGGGGGAAATGTCCCGACTCGCCCAAACACCGCTGATGCTTCAGTTACATCATTCACTAATGTTGCGCCCAACGCACAT GCTGTGAATGATGCAGTTCTGGAAACAGACTCTTCATTTGGATTTTTGGGACAGATTCCTAGAAATTTTAGCCTTTCAGA TCTAACTGCTGATTTTTCTTTGAGTTCTGATATACTGGACAGCTATTCTAGGTCACCATTTCTACCCACTGATAATAACT TCCTTGAGAAAGTAGAGCAAGATAACAATAGGCTGGACTCCATATCAGAAGGCCTAAGTCATGAAGACTTTGGGAGTGAA TAG
Protein sequence (LotjaGi1g1v0666200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSGPGEPGGPVRQVSCQDIQLVQNLIERCLQLYMSRQEVVDKLVCQAKIEPSFTELVWQKLEEENEEFFRAYYTRLMLK QQIVEFNRLLDQQLHLMHSNSLSASNGSHNPAVASLPASNGSHISAVSSLSNSNGSHIPTISSLPNSNGSHITAVSSLPI SNGSHIPRIPSLLNSNGSHITAVSSLPNSNGSHIPTRHENPTCYSAERPQPDLMSENMQHSVNSRLSNTFNNGGPSLHTR MHTVVDMSSHGIGINGSPSMLSAQNSNLGMMQGINGGMIKLEPGYSDCSYMFSTGGNVPTRPNTADASVTSFTNVAPNAH AVNDAVLETDSSFGFLGQIPRNFSLSDLTADFSLSSDILDSYSRSPFLPTDNNFLEKVEQDNNRLDSISEGLSHEDFGSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 164 | 157 | 2.0E-108 | – | |
| PANTHER | 8 | 164 | 157 | 2.0E-108 | ||
| TIGRFAM | 20 | 76 | 57 | 1.8E-25 | ||
| Pfam | 23 | 75 | 53 | 1.9E-25 | ||
| PANTHER | 178 | 377 | 200 | 2.0E-108 | – | |
| PANTHER | 178 | 377 | 200 | 2.0E-108 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0666200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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