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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0666400 |
| Transcript ID | LotjaGi1g1v0666400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Strictosidine synthase family protein; TAIR: AT3G57030.1 Calcium-dependent phosphotriesterase superfamily protein; Swiss-Prot: sp|Q4V3D9|SSL10_ARATH Protein STRICTOSIDINE SYNTHASE-LIKE 10; TrEMBL-Plants: tr|A0A1J7HYN4|A0A1J7HYN4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0666400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:122888740..122893596) extracted from Lotus japonicus Gifu genome v1.2.
GATTTGGGTCGAGACTTTTGACATTTTCATCATCCAAAACACATCTCCACGTCAACACCTCACATGGTCAAAACTAACAC ATAAAATATACTTTTTGAGAGAGAAAAAAAAAACTCTTTCTTCTCTCAAATGGAAGGGGGAAAATTCTTCTCTACCTCTC CATCAAACCGTATATGAGTTGTTGTCTCTTCTCATGCGCAAACCAAACACCCATTAAGAAAAAGACAACACATGTTTCAC AAGTAAAGCACAAGAACCATAGCACACAAACTTGCACTAGTGGCATCATCATCATCATCATCATCATCATTCCCAGTTCC ACTTTTGGCTTAGCTTAGCTATGAGCTCAAGGCTCATCGTTGTTGCAGCGGTACTTGCTCTCTTGGCCATCCTCTTCACC TTCTTCAACCCTCAAACCCTGTTCGCGCCGCCACCTGTTCCTGGCTCCAAGGACCACCTCCACGCTGCTCAGGTGCTCCA TGTCACCGGAGCCGTCGGGCCGGAGAGCCTTGTTTTTGACAGCCGCGGTGAAGGGCCGTATACCGGCGTCGCCGATGGAC GGATTCTGAAGTGGGAAGGGGAGGAGCGAGGTTGGACTGAATTTGCTGTCACCAGTTCCAACAGGTAACTAACTAGTAAC AAACTACCCAGTTGGTGTTTTTACTTTTTGACAATGAATGATTAATGTGACACTTCAAAAATGGACTTATAGATAAGATT TTTATGAATGTTAGAGATTAATTGGGAGATTAGGTCCATGTTATTGTATCAGTGAGGCTTCAAATGGATCATTGGTTGGT AGAGATTTTATTTGGATGCATGAGTTTCTGTGGGGTGGGTGGGGTTGTGTTCTTATCATTTTGAATTGGATGAGGATTTT GAGCATGGTTGGATTTAAATCATTGAAAATGAGTTGTCTTTACTCTTTTTGGTTATTGTAGGGATTTCTTGAGCTTAAGG AGTCATTAATGTATAGTTGCTTAGTTTGTTTCACATGCCTTTTGAGACAATGTAGAGTAGAGATGAATGATGCTGTATAG TACCAGTAAGAAGTGTAAGATTCATGTGGATTAATGACCAATCAGAAATAGGTTTGACGGAATCATGTGGGCGGTGGCTG AAATTGCTATCGATCATGTATTGCCACCTAGATTCTTGCAGTTTCGTGGTTGTAGATTTTTTAATCTTTAGCATTTCCGA GTAGAGATAGAGATTGCTGGCACATTACTGCGGTGATGGATGCAAGAGTCAGGGGCAATTGTTCCCTTGAAAAAGATCAT TCACACCAGTAACTGTTATTGTGTGATTAACTCAGAAATATGCAGTTTATGAAGTAGAAAGGGCTGCACAATGTGTTGTA GCAACAACATGATTTTGCCAACTAAGTGTGTGTTTGGATACAGGTTAAACCTAAAGTGAAAGTACTTTTTCCTCAATTCA TAGAAAGAGTTTTGTTCACTTTTTGTCTAGAAGTAAGTTTTAACATTCGTTTGCACCAGTGCTAAGTGCTAATGGGTATT CAAAGTTCAAACATACCCTAATTCCAACCAAATGGGGCACAGGGATTAGGATTCTTATTTAAGCAGCATTATTTAATTTC TAAACCTTCTGATCCTCAATTTCACGAGAATGGATTTTCTAAAGACTAAACCTTACCATGTTAAAATTTGTGTTTGTCTT TCTATAAATTTTCACAAATTTTGATTGGGTCTCGTCCACTTCATCTGTAAAAAGCGAAATAGATGCAAAATTTTAACATG GCAGAGGTTATATGAAACTTAAAATAAGAGGATCCACTCCTGTGGCTTTTGGATCATGGTGGGTGTAAGGGCTTATTCTA TTTGGCATGTGGAAAGGTTAAAAAAATAGTATAAGGTAAACATTTGCCCATGTATTCTCTGTATTTAGTTCCAAATGGCC ACAACAATTTTTGAGCATGCAAGCATGGATGTCTAACTTTCTGTATCTGTTCACATATCAGTACACTTGCAGATTTTGCA AATGTTTGGGCCAGTTCTGATGAATGATAGTGAACAGTTTATAGTTTTTTTCCCATTTGAATTTTAGTTTAAATGGGTGT TTTTATTCAGGGGAAGTGTACAGCAAGGGCATATGCAGACGATTTTTTATTAAATCTCATATCATAAGACCCAACTCATA CTGATAGCTGTTATGATTATCTCATGAATCTAATTAGTTTAGTTGCATGATTTTCTAGGACAGACTGCGTGCGTCCATTT GCGCCAGAGCTGGAGCATGTTTGTGGGAGGCCATTAGGACTGAAGTTTGATAAGAAAAGCGGAGATCTATACATTGCTGA TGCCTACCTTGGCCTAAAAGTAGTAGGACCTGCCGGGGGTTTGGCCACCCAAGTGGTGACAGAAGCTGAAGGTCAGCCCT TTCACTTCACCAATGACATGGACATCAGTGAAGATGAAGATGTGATTTACTTCACTGATTCTAGCACAATCTTTCAGAGA AGGTTAGTTCATTACAAAAGGATACCTTCCTTATGTTGTCAAGCGTGTCTGCATCTTGTTAATAAATTGTCCTTATAACA GACTATGTCTTGTTTGGAATAGCTTATTTGAGTTTATCTTATAGCATAAGCACTTACACAAGTCTTTGGGAGAGCTTTTG TAAGTAGTTTATTACCTACCTATAGGCTGCTCAGATAAACTTATGAAAAAGTGCTTATATTTTGAGCTTATTTTATATAA TTTTCTCAAACTACCTTATGAATAAGCCCTTATTTCCATAAGGGTTTAGGGTTTAATTAAGCTGTTTACCCTAAGAATAC ATTGTCCTTCAGTGTATAAAATGAAATTGAAAAATAATTCTTGCATCTTGTTAACTCAAGTATTTCCCTGTTAAGATCAT AATTTTGGAAGGTTCAACCATGTGGTGCAGAGGGAAATTTCTCACAAATTATCAATTACTTGTTCAAGTCAAATCATAAC TGAGATGTAGCTTGTTTGAATTGTTGGCGAGTACACAATCCAAAGCACAGTAACTCCAGAAGCTACATTTTGTAGCTTCT CCGTAGAAGTGATTATGAAACTTTCTACCACAGAACCAAACATGCTTATACTGTGTTTGCTGTTCTGCATGATAATCTTT TTGTCATTTGTATCTGACTATCTGGTAACACTATGAGGACTAACTTCTAGAAGATGCCTATAAAACTAACATAAGTACTA TCAGAAGATTTTCTATTTGCAGAGAATTTTTAATCTAAAAGTCGGTCACTTTTGATTGCAGGCAGTTTATGCTCGTACTC CTTAGCAAAGATAAGACTGGCCGGTTAATGAAATATAACAAGCTAACGAAAGAAGTAACTGTCCTATTACGCGACCTTGC TTTTCCCAATGGTGTTGCTTTAAGCAGAGATGGTTCATTTCTTCTGGTAGCAGAAACCACTACTTGCAAGATCCTGAGGC TTTGGCTTGGTGGACCTAATGCTGGCCAAGTGGATACTTTTGCTGTTCTTCCAGGTTTTCCAGACAATGTAAGAAGAAAT TCCAAAGGGCAGTTCTGGGTAGCTTTGCATGCGAAAGCAACTCCTTTCGCGAAATGGATTTCTTCATTTCCATGGCTGGG TAATGCATTGCCGAAGGTTGGATTTAACTTCAAGCAGTTGCACACATCATTTGCTGGGTGGAAGCCTCATGCCACTGCTA TAAAGCTAAGTGATAAAGGAGAGATATTAGAAGTCTTGGAAGATTGTGAAGGAAAGACCTTAAAGTTCATCAGTGAAGTG GAAGAAAGAGATGGGAAACTTTGGATTGCATCAGTGTTAATGCCTTTTATTGGCATTTATAAGGTATGAGAGTGTGTATT TGAGTTACCTTTTCAAATTAAATAAGATGTAGTCATTTATATATGCCGATTATGTAGATTATGAATTGCATTGAGTGACT GATGAGGCTAGTTGCTCATTTACATGGACTCTGTTCATTCTCATAAAATATTTTGTCAGGCAGAACTATTCATAGTGTGT GCAGGATTGGTAAAACAACAGCAAGAACCTTTTTAATTAGTCCATGGGCAGGGTTATTATATGTATCGAATTACATTTTA ATATCACGAATGTATTGACGTATTCCTAGTAAATTTCCTTCTTGTGCACCACCATATGTGTGATGCAACTCAATGTGCTT TGACTTTCCAAGAAAAAACTGGGTTCTTGGACATTACTATTGCAGATTAATTATCAGTTTATCACCTAAAGTAGGAGTAG GATCTTCAACCTTTTTCTGAAAAACATCCTTAAAATATTCATTTCTATTCAAAAATCTATACCATTCCACTTGTGTTGTT CAAGTCGAGAACATCTATATCATGGTAGCTAGCTCTCCCAGGAGTACATAACAAGAAAATGCTTAATTACCTGCAAAACT TTACTAGGCTGTTGCAAAATCTCGTTGGCTGTCAAAACATGTTTTGAAAAAAAAAAGAAAGTGCTACCGATGGTCAATGT TGTTGGTTATTTGCTGGGAAGTAATTTTTTTAGCGGGATTAATTACCACTGACGACCAAGGCTGAGGGTAACTTGGCGGG CATAAAAAACTTTGGCCATCCGTTTCTGGCGGTACAGTCGGCAACTTGGTGGTCTTTTGAAATTTGTCGTGTGTTATAGA AGGCTTTGACCGTTGGTAGACTATAATTATTTTGAAAAAAACTCGTCGGTAACCTCTAAAGAGGTCTTGACTACTACTGA ACCTTTTACTCACGCTTCCTTCAACTTCTTCTTTTCCTAATGTTTGTATAAATTATGAATAACGATAGTTTGGTCACAAA AATACTCCTTTTGTTGCTGATAACATTGTCACCTTTATGGATGAAACTTTCATGAAG
CDS sequence (LotjaGi1g1v0666400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCTCAAGGCTCATCGTTGTTGCAGCGGTACTTGCTCTCTTGGCCATCCTCTTCACCTTCTTCAACCCTCAAACCCT GTTCGCGCCGCCACCTGTTCCTGGCTCCAAGGACCACCTCCACGCTGCTCAGGTGCTCCATGTCACCGGAGCCGTCGGGC CGGAGAGCCTTGTTTTTGACAGCCGCGGTGAAGGGCCGTATACCGGCGTCGCCGATGGACGGATTCTGAAGTGGGAAGGG GAGGAGCGAGGTTGGACTGAATTTGCTGTCACCAGTTCCAACAGGACAGACTGCGTGCGTCCATTTGCGCCAGAGCTGGA GCATGTTTGTGGGAGGCCATTAGGACTGAAGTTTGATAAGAAAAGCGGAGATCTATACATTGCTGATGCCTACCTTGGCC TAAAAGTAGTAGGACCTGCCGGGGGTTTGGCCACCCAAGTGGTGACAGAAGCTGAAGGTCAGCCCTTTCACTTCACCAAT GACATGGACATCAGTGAAGATGAAGATGTGATTTACTTCACTGATTCTAGCACAATCTTTCAGAGAAGGCAGTTTATGCT CGTACTCCTTAGCAAAGATAAGACTGGCCGGTTAATGAAATATAACAAGCTAACGAAAGAAGTAACTGTCCTATTACGCG ACCTTGCTTTTCCCAATGGTGTTGCTTTAAGCAGAGATGGTTCATTTCTTCTGGTAGCAGAAACCACTACTTGCAAGATC CTGAGGCTTTGGCTTGGTGGACCTAATGCTGGCCAAGTGGATACTTTTGCTGTTCTTCCAGGTTTTCCAGACAATGTAAG AAGAAATTCCAAAGGGCAGTTCTGGGTAGCTTTGCATGCGAAAGCAACTCCTTTCGCGAAATGGATTTCTTCATTTCCAT GGCTGGGTAATGCATTGCCGAAGGTTGGATTTAACTTCAAGCAGTTGCACACATCATTTGCTGGGTGGAAGCCTCATGCC ACTGCTATAAAGCTAAGTGATAAAGGAGAGATATTAGAAGTCTTGGAAGATTGTGAAGGAAAGACCTTAAAGTTCATCAG TGAAGTGGAAGAAAGAGATGGGAAACTTTGGATTGCATCAGTGTTAATGCCTTTTATTGGCATTTATAAGGTATGA
Protein sequence (LotjaGi1g1v0666400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSRLIVVAAVLALLAILFTFFNPQTLFAPPPVPGSKDHLHAAQVLHVTGAVGPESLVFDSRGEGPYTGVADGRILKWEG EERGWTEFAVTSSNRTDCVRPFAPELEHVCGRPLGLKFDKKSGDLYIADAYLGLKVVGPAGGLATQVVTEAEGQPFHFTN DMDISEDEDVIYFTDSSTIFQRRQFMLVLLSKDKTGRLMKYNKLTKEVTVLLRDLAFPNGVALSRDGSFLLVAETTTCKI LRLWLGGPNAGQVDTFAVLPGFPDNVRRNSKGQFWVALHAKATPFAKWISSFPWLGNALPKVGFNFKQLHTSFAGWKPHA TAIKLSDKGEILEVLEDCEGKTLKFISEVEERDGKLWIASVLMPFIGIYKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 4 | 370 | 367 | 6.9E-197 | – | |
| PANTHER | 4 | 370 | 367 | 6.9E-197 | – | |
| Phobius | 5 | 20 | 16 | - | – | |
| TMHMM | 5 | 22 | 18 | - | – | |
| SUPERFAMILY | 17 | 369 | 353 | 2.83E-49 | – | |
| Phobius | 21 | 28 | 8 | - | – | |
| Phobius | 29 | 371 | 343 | - | – | |
| Gene3D | 37 | 371 | 335 | 1.4E-124 | ||
| Pfam | 160 | 247 | 88 | 9.8E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Strictosidine synthase activity | Catalysis of the reaction: 3alpha(S)-strictosidine + H(2)O = secologanin + tryptamine. |
Expression pattern of LotjaGi1g1v0666400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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