Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0667700 |
| Transcript ID | LotjaGi1g1v0667700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Triacylglycerol lipase SDP1; TAIR: AT5G04040.1 Patatin-like phospholipase family protein; Swiss-Prot: sp|Q9LZA6|SDP1_ARATH Triacylglycerol lipase SDP1; TrEMBL-Plants: tr|V7CVC0|V7CVC0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0667700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:123057434..123062173) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAACAAAAAGAAACCCTTCACACGTTTTGGTAGCTTGTTCTTTCAAACTGTTTCATTCCCTCACGCTTCCGTAACT AGCTTGTTATTTACAACATTTACTGTCTGCTATGCTATGCATCATTTGCCTTTTCAAACCATTCTCCGGTCGCACGCACA CACACACACACTATCTCATCAGAAACTTCCAAACCAGCCAGTTGCAATCTTTATTCATTCGGTTTCCTTATCCTCTTCAT CCAACGAACCATAATCATGTTAATACAATTTGGATATGTTTCGTTGTTTCCACGTCATGCTTTTCGTGACTAGGCTCCGC GTCACCTCAAGGTAGCAGACTAGCAGCATCTTTATCTCCTCCTCGTTCCACATCCCAATGCCCCACTTCCTCCCTCCCAT TCATTCTCACTTTCAGAAGGAAATTTTGTTGCTTCGATTTTTGTTCCAGAATCGACCAATTTCATTTCTAGGGTTCCTTC AAAATTGTTTCTTTCTTACAAATTCCAGGTGGGCATCTCTCATTTCTTCTTGGCTCCCTTCAACTTGGAACAAAAATAAT CACTTTTTCAGCTTCCAAACCAACCATTGAAGACACTTTTTTAGTTCTGTTGTTTTGATTTAGTTTATAGAAGCTTTGGA GTTCAAATCCTAGTAGTGTAAATGCATATTTGTAAATCTTTCTACAATTGATTCTGAAATCCAAATCAATTTTGGGGAGA AGATTCTGTTAGTTGAATTGCTTTTATATTCTACAACTCATTCTGAGGATAAAAAAGTTGATTCACACATAATAGATATA GATCATTTCCATTGCTTGAAAAATACAGCTCTTTGATACTGCCCTTGAAAATACAACTCTCTTGTAGATTGTTTAATCCT AGAGTTTGTAGTTTTGCCCTGTGAGAAAAGGGTTAGATTGTGTCAAGGTAGAATGGATCATATTAGTAATGAGGCTAGTG TTGACCGTTTTCCAATTGGCCCATCAGACATTCTTGGACGCACAATTGCTTTCAGGGTTCTATTCTGCAAGTCCATGTCT CATTTGAGGCATCAGCTGTTTCATGTCTTGTTGGTTCTGTTCTATAGGTCTAGGGGGATTTTGTCATCCTTTTTATCATG GTTTCATCCGAGGAACCCACAGGGGATATTGGCAATGATGACTATAGTTGCTTTCTTGTTGAAACGGTACACGAATGTAA AGGTGAGGGCTGAGATGGCTTATAGGAGGAAATTCTGGAGAAACATGATGAGATCTGCTTTGACCTATGAGGAGTGGGCT CATGGAGCTAAGATGCTTGATAAAGAGACACCAAAGATGAATGAGTCTGACCTTTATGACGTGGAATTGGTGAGGAACAA GCTTCAAGAGCTTCGGCATCGTCGACAAGAGGGATCTCTTAGAGATATTATGTTTTGTATGCGTGCTGATCTTGTTAGAA ATCTAGGTAATATGTGTAACCCTGAACTGCACAAGGGTAGGCTTCAAGTCCCCAGGTTAATCAAGGAGTACATTGATGAA GTGTCAACCCAATTGAGGATGGTCTGTGACTCTGATTCACAGGAGCTATTACTGGAAGAAAAGCTTGCTTTCATGCATGA AACTAGACATGCATTTGGGAGGACAGCTTTGCTGTTAAGTGGGGGTGCTTCTCTTGGAGCTTCTCATGTAGGCGTGGTTA AAACACTGGTAGAACATAAACTCTTGCCTAGGGTAATTGCTGGTTCAAGTGTGGGATCCATAATGTGTGCTGTTGTTGCT ACTAGGTCTTGGCCTGAGCTTCAGAGTTTCTTTGAAGACTCATGGCACTCAATGCAATTTTTCGATCAAATGGGAGGGAT TTTCACAGTTGTGAAGAGGGTCGCAACACGTGGTGCTGTTCATGAGATCAGACAGTTGCAAATTATGTTGAGGCATCTGA CAAACAACCTTACATTTCAAGAAGCTTATGACATGACAGGTAGAGTTCTTGGGATTACAGTTTGCTCCCCAAGGAAGCAT GAACCTCCGAGATGTCTTAATTACTTGACCTCACCCCATGTGGTTATATGGAGTGCAGTCACCGCTTCTTGCGCCTTTCC TGGCCTTTTTGAAGCTCAGGAATTGATGGCAAAGAATAGAAGTGGAGAGATTGTTCCTTACCATCCCCCTTTTAATCTGG GTCCTGAGGAAGGCTCCACACCAGCTCGTCGGTGGAGGGATGGTAGCTTGGAAATTGATTTGCCTATGATGCAGTTGAAA GAGCTATTCAATGTCAATCATTTTATAGTCAGCCAGGCCAATCCTCATATTGCACCATTATTGAGATTGAAAGAATTTAT ACGAAATTATGGAGGCAATTTCGCTGCCAAGGTACATACATATTCTGTTTATTGGCATTGCATACATTTGTTTCTTTAAT TTTTTTAACTTCTACAAAGCTCATTACCTCATGTAGAGCCTCTTATCTTCCCTTAGTCTTCAATTGATGTGTCTAATAGT TCCTCACTGTTTGACTAACTATATGAAGTTTTACATGTTCATTTGTATGTTCTTATATTTGCTTATGTTTTAGATATTCA ATGCTTTTTACTCATGGATTTGATTCGGGCTTGTTTTGTATGTGTGCTTGTGTCTCTGAAATATCATGCACCATGTACTT ATTATTTGTTGGACAAAACCCTGTGGAGTTTTATTGCCTCAACAACTCCACTCACTGACAACTTTTGGGGAGGACTTGTG CCTGTTATGTTTGGATGTCAAGAAGAGATCACTGCCATCCTATGTGCATATCACTCAACGTCATCTCATATTTGTAAAAT GTTTAATCTGCTATGCAGATGTAGTAGCTTAGTGTCATTGCCTTGTTTTGAATTCCAGTGACAATCTATGTTAATGGCAA AAGCTAAGTGTTAGACTTGAGACAGTTGTAAAATAGGTATAATTAAATGTGGTTTTTGGTTATGCAGCTTGCTCAACTTG TAGAGATGGAGGTGAAACATCGATGTAATCAGATACTGGAACTTGGCTTTCCTCTAGGTGGACTTGCGAAGCTGTTTGCT CAAGAATGGGAAGGTGATGTGACTGTTGTTATTCCTGCAACCCTTGCTCAGGTGTGCCTAAAGAACATTTAAATATCAGT TAAGTATTTGTTTTAATTAAAAACATAACTTCAACCAGATATAAATTCGAAGGCATGGTAGTGCTTAATATCAAAAGGCT TTGCTTATAAAACTTGTTAATGTTCCAATGTTTTTGGAAACACAGTGGAATATTGTGGAAAGTTTTCTATATTTATATTT TTCCAACAAGTTTTGGAATTTATATATGTTTCACTTTCTAAGGATGATTCAGCGGATTATTGATTAACTAACTAGTGTAT ATTGTGACCTGTCTCCTGCTTCAGTACACAAAAATTATACAGAACCCTTCATATGGGGAGCTTCAAAAGGCAGCCAACCA AGGGAGAAGATGCACCTGGGAGAAGCTTTCAGCCATAAAAGCAAACTGTGAAATTGAGCTTGCTCTTGATGAATGTGTGA CGATTCTCAATCATATGAGAAGACTAAAAAGGAATGCTGAGAGAGCTGCTTCTACTTCTCATGGTTTGTCCAGCACTTAC AAATTCAGTGCTTCTAGAAGAATTCCCTCATGGAATTGCATTGCAAGAGAGAATTCCTCAGGCTCCCTTGAAGACCTTAC AGAAGCTGTTTCCTCATTGCATCAAGGCATCGGCAGTTCCAATGGAGCCAATGGGAAAACTTGGAAGAGCCCCCGTGGCA TGCATGAGGGGGGTGACAGTGACTCTGAAAGTGTTGATCTGACTCCTTGGACCAGATCTGGTGGACCTCTGATGAGAACT GCTTCAGCAAATGTTTTCACTGACTTTCTCCAAAACTTGGAGGCTGATAATGAACTACATAGAGGCTCAGTGGCTCATCT TAACTCTCATGCAAATATGTTCACAGACTCTGAGCAGAGGGAAATTGGCAACAGGGTTGTTACTGGGTCTAGTATTCTGG TAACTGAAGGTGATCTTTTGCAGCCTGAAAGGATCCATAATGGGATTGTGTTTAATGTTGTCAAGAAAGAAGGATTAAGA CCTTCAAATAGGAGTCATGATTTTGGAAATTACAGTAATGAAGTTGCTGAATGTGTCCAGATTGACTGTCCAGAGAAGGA GATGGATGCTGCTAGCTCAGCTTCTGAACATGAAGATGATGAATCCACACCAGCTAGGCTCCTCACTGAAACACCAGACT ATAATTCCATGGACAATGCTGGCTCAGATGATAGTTAGTTTTAAAGATAATTTTTTCCAGTGGTTTTTTTTAAATATTTT GTTGTATTGATTTCCCCATTGTAAATAGTAAGAAATCTGGTCTTGGAGGGTCTCTATTCTTGATTTGATTGCCATAATCC ACCATTTGGTTTACTCATAAATGTAATTAAACAGAGAAAGGGAGTTTACACTTCCACGACCATTTGATGTCTTGGCTGCC CCTTCTGCAGATGAATGAAATTGATATGGTGTTCATGATAGTGAACATGATTTGATCAAATGAAGTGTATTGTTAATAAG AGAGGATTGGTTTCTTTCTTTCTTTTTAGGGTAAGAGGAGGATCAGTGTATGCTTGGAAATAAAATATATTTTTCACATT GGAGTGAGAAGTGACTATGGAGAAAGCTGCTCCTAATAGCTTTTGTGAAGGGTTCTTGTAGAATATTTAAACGTGAAACA AAACATGCTATTGGTTTTTG
CDS sequence (LotjaGi1g1v0667700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCATATTAGTAATGAGGCTAGTGTTGACCGTTTTCCAATTGGCCCATCAGACATTCTTGGACGCACAATTGCTTT CAGGGTTCTATTCTGCAAGTCCATGTCTCATTTGAGGCATCAGCTGTTTCATGTCTTGTTGGTTCTGTTCTATAGGTCTA GGGGGATTTTGTCATCCTTTTTATCATGGTTTCATCCGAGGAACCCACAGGGGATATTGGCAATGATGACTATAGTTGCT TTCTTGTTGAAACGGTACACGAATGTAAAGGTGAGGGCTGAGATGGCTTATAGGAGGAAATTCTGGAGAAACATGATGAG ATCTGCTTTGACCTATGAGGAGTGGGCTCATGGAGCTAAGATGCTTGATAAAGAGACACCAAAGATGAATGAGTCTGACC TTTATGACGTGGAATTGGTGAGGAACAAGCTTCAAGAGCTTCGGCATCGTCGACAAGAGGGATCTCTTAGAGATATTATG TTTTGTATGCGTGCTGATCTTGTTAGAAATCTAGGTAATATGTGTAACCCTGAACTGCACAAGGGTAGGCTTCAAGTCCC CAGGTTAATCAAGGAGTACATTGATGAAGTGTCAACCCAATTGAGGATGGTCTGTGACTCTGATTCACAGGAGCTATTAC TGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACATGCATTTGGGAGGACAGCTTTGCTGTTAAGTGGGGGTGCTTCT CTTGGAGCTTCTCATGTAGGCGTGGTTAAAACACTGGTAGAACATAAACTCTTGCCTAGGGTAATTGCTGGTTCAAGTGT GGGATCCATAATGTGTGCTGTTGTTGCTACTAGGTCTTGGCCTGAGCTTCAGAGTTTCTTTGAAGACTCATGGCACTCAA TGCAATTTTTCGATCAAATGGGAGGGATTTTCACAGTTGTGAAGAGGGTCGCAACACGTGGTGCTGTTCATGAGATCAGA CAGTTGCAAATTATGTTGAGGCATCTGACAAACAACCTTACATTTCAAGAAGCTTATGACATGACAGGTAGAGTTCTTGG GATTACAGTTTGCTCCCCAAGGAAGCATGAACCTCCGAGATGTCTTAATTACTTGACCTCACCCCATGTGGTTATATGGA GTGCAGTCACCGCTTCTTGCGCCTTTCCTGGCCTTTTTGAAGCTCAGGAATTGATGGCAAAGAATAGAAGTGGAGAGATT GTTCCTTACCATCCCCCTTTTAATCTGGGTCCTGAGGAAGGCTCCACACCAGCTCGTCGGTGGAGGGATGGTAGCTTGGA AATTGATTTGCCTATGATGCAGTTGAAAGAGCTATTCAATGTCAATCATTTTATAGTCAGCCAGGCCAATCCTCATATTG CACCATTATTGAGATTGAAAGAATTTATACGAAATTATGGAGGCAATTTCGCTGCCAAGCTTGCTCAACTTGTAGAGATG GAGGTGAAACATCGATGTAATCAGATACTGGAACTTGGCTTTCCTCTAGGTGGACTTGCGAAGCTGTTTGCTCAAGAATG GGAAGGTGATGTGACTGTTGTTATTCCTGCAACCCTTGCTCAGTACACAAAAATTATACAGAACCCTTCATATGGGGAGC TTCAAAAGGCAGCCAACCAAGGGAGAAGATGCACCTGGGAGAAGCTTTCAGCCATAAAAGCAAACTGTGAAATTGAGCTT GCTCTTGATGAATGTGTGACGATTCTCAATCATATGAGAAGACTAAAAAGGAATGCTGAGAGAGCTGCTTCTACTTCTCA TGGTTTGTCCAGCACTTACAAATTCAGTGCTTCTAGAAGAATTCCCTCATGGAATTGCATTGCAAGAGAGAATTCCTCAG GCTCCCTTGAAGACCTTACAGAAGCTGTTTCCTCATTGCATCAAGGCATCGGCAGTTCCAATGGAGCCAATGGGAAAACT TGGAAGAGCCCCCGTGGCATGCATGAGGGGGGTGACAGTGACTCTGAAAGTGTTGATCTGACTCCTTGGACCAGATCTGG TGGACCTCTGATGAGAACTGCTTCAGCAAATGTTTTCACTGACTTTCTCCAAAACTTGGAGGCTGATAATGAACTACATA GAGGCTCAGTGGCTCATCTTAACTCTCATGCAAATATGTTCACAGACTCTGAGCAGAGGGAAATTGGCAACAGGGTTGTT ACTGGGTCTAGTATTCTGGTAACTGAAGGTGATCTTTTGCAGCCTGAAAGGATCCATAATGGGATTGTGTTTAATGTTGT CAAGAAAGAAGGATTAAGACCTTCAAATAGGAGTCATGATTTTGGAAATTACAGTAATGAAGTTGCTGAATGTGTCCAGA TTGACTGTCCAGAGAAGGAGATGGATGCTGCTAGCTCAGCTTCTGAACATGAAGATGATGAATCCACACCAGCTAGGCTC CTCACTGAAACACCAGACTATAATTCCATGGACAATGCTGGCTCAGATGATAGTTAG
Protein sequence (LotjaGi1g1v0667700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDHISNEASVDRFPIGPSDILGRTIAFRVLFCKSMSHLRHQLFHVLLVLFYRSRGILSSFLSWFHPRNPQGILAMMTIVA FLLKRYTNVKVRAEMAYRRKFWRNMMRSALTYEEWAHGAKMLDKETPKMNESDLYDVELVRNKLQELRHRRQEGSLRDIM FCMRADLVRNLGNMCNPELHKGRLQVPRLIKEYIDEVSTQLRMVCDSDSQELLLEEKLAFMHETRHAFGRTALLLSGGAS LGASHVGVVKTLVEHKLLPRVIAGSSVGSIMCAVVATRSWPELQSFFEDSWHSMQFFDQMGGIFTVVKRVATRGAVHEIR QLQIMLRHLTNNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRSGEI VPYHPPFNLGPEEGSTPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFIRNYGGNFAAKLAQLVEM EVKHRCNQILELGFPLGGLAKLFAQEWEGDVTVVIPATLAQYTKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCEIEL ALDECVTILNHMRRLKRNAERAASTSHGLSSTYKFSASRRIPSWNCIARENSSGSLEDLTEAVSSLHQGIGSSNGANGKT WKSPRGMHEGGDSDSESVDLTPWTRSGGPLMRTASANVFTDFLQNLEADNELHRGSVAHLNSHANMFTDSEQREIGNRVV TGSSILVTEGDLLQPERIHNGIVFNVVKKEGLRPSNRSHDFGNYSNEVAECVQIDCPEKEMDAASSASEHEDDESTPARL LTETPDYNSMDNAGSDDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 41 | 41 | - | – | |
| PANTHER | 1 | 702 | 702 | 0.0 | – | |
| PANTHER | 1 | 702 | 702 | 0.0 | – | |
| Phobius | 42 | 64 | 23 | - | – | |
| Phobius | 65 | 69 | 5 | - | – | |
| Phobius | 70 | 87 | 18 | - | – | |
| Phobius | 88 | 818 | 731 | - | – | |
| Pfam | 96 | 226 | 131 | 4.6E-29 | ||
| CDD | 163 | 570 | 408 | 0.0 | – | |
| Gene3D | 217 | 308 | 92 | 4.9E-14 | – | |
| SUPERFAMILY | 229 | 575 | 347 | 1.07E-46 | ||
| Pfam | 233 | 424 | 192 | 2.7E-14 | ||
| ProSiteProfiles | 233 | 436 | 204 | 39.574 | ||
| Gene3D | 309 | 488 | 180 | 2.4E-7 | – | |
| MobiDBLite | 628 | 660 | 33 | - | – | |
| MobiDBLite | 777 | 818 | 42 | - | – | |
| MobiDBLite | 777 | 799 | 23 | - | – | |
| MobiDBLite | 801 | 818 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Triglyceride lipase activity | Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate. | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of LotjaGi1g1v0667700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…