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LotjaGi1g1v0667900.1

Overview

Field Value
Gene ID LotjaGi1g1v0667900
Transcript ID LotjaGi1g1v0667900.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description UDP-sulfoquinovose synthase; TAIR: AT4G33030.1 sulfoquinovosyldiacylglycerol 1; Swiss-Prot: sp|Q84KI6|SQD1_SPIOL UDP-sulfoquinovose synthase, chloroplastic; TrEMBL-Plants: tr|I3SP95|I3SP95_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0667900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:123069936..123074086) extracted from Lotus japonicus Gifu genome v1.2.

GATCGAACCTCCAACCTCATACTTATGAGACGAATTGAACTAACCACAACCAAAATAAAACATTCGTCCCTACCCTGTAT TTAGTTCTAATATTTCAAATCTCAGGTATTTTCCAGTTTTTTAGAAGTTTATAAATATGAATAAAAATTGGGCCGAAGAG ATACAATGGGAGTTGTACAAATTGGGCCAGCAACAAAGAGCTAAACCAGTAAAGAAAGAACAAAGAATAAACGGATATTC CCCTTCATCCCTTCTCATCATCCATCGTTGAAACCCAAGGATCATCACTGGCAGGGGTTTATCCGGAACCAGAACCAAAG GGTCAAGTCTGTTTGACTCTTCACTCTCCACTAACTGCTCCACTTTCGGTTTCTCCAAGGTAAACCACTCACTTACTAGT ACCATCTGTTGCAATTTACGTTGTTCTTAGCTTGAGTTGTTATGTCGGTTTCCATCTTCCTATGAAAAATGGGCATGGAT CAAATGATGTTCTGTGTCTTGAGGGCATGAAAATGGAACAACTTGGTTTTTCTTTTGTTTGTTTCTTTAAGTGGGTTTAG CTCTTTTTGTTGTTTCTAATTTACCCTGTTTAGTATCATGTTGATGCTTGCTTATGAAACTAAGAATATCTGCTTCAATT TGAAAATTGGGTCCGTGAATTGGAATTACTTGAAAGTGGAACTAAGTGCTCTATTGTTATTTGAAGGGCAATGCAAATGA ATGGCCTTTACTATGAGTATTCATTTTTAGCGAGACACTGATTTTTTTCGCAATGTTCGGGTAAATGGTGTTCAATGTTT TGAGGTCATGAAAGTGGTTAATTTGTTGATCTTCACAGTGATTATTTCCTGTCTTTCAAGTTAATAGTTATTATCATTGC TTTTCTTCCATTTCTCGAAGTTGGTCTAGTCCTCGTGTTGTTTTGTTTTGATGCTTGCTCTTGAAATTACCGGTCTTTAT GCTTGATTAGTTGCTTTTGTTCCACAAAGTTGGAAATTATGACCGTGAGTCCTTGTCTTATTATTACTTGCTGTGCGAAC TATGTATTTAAGATGGTTTGAAGTGAAATGCAAATGACAGGATTTTAATTCTTGTTTCAGGTAAGTTCAAAGTAGTTTGT GAAACTTGTGATTGAGATGGCTCAATTACTATCATCATCGTGCTCCTTGACTATATCTTCTAGAAATAAACCTTACTTAA AACCCCTTAACCAATGTTCAACACCATTTTCTGTAATGGTTGGTTGCAATAATTCCAGATCTCCACTTAGAAGGCTTTCC TTGCGAGACCAGAAGCCGAGAAAAAGTTTTTCTGCAGTACATGCTGCTGCAGTTTCAACTAGCCAGGATACCCCAGTTCA AACTAGCTCTGGCGACCCTTTTAAAGCAAAGCGAGTCATGGTCTTTGGTGGAGATGGCTATTGTGGTTGGGCAACTGCCC TCCACCTTTCTAACAAGGGTTATGAGGTTGCCATAGTTGACAACCTTGTTCGACGCCTTTTTGATCACCAGCTTGGACTA GATTCTCTAACACCAATTTCCTCCATCCAGAATCGCCTTCACCGCTGGAAAGCTCTTACCGGAAAAAGTATTGAGCTCTA CATTGGTGACATATGTGACTTTGAGTTCTTAGCTGAAACCTTCAAGTCATATGAACCCGATGCTGTTGTCCATTTTGCGG AACAGAGATCTGCTCCTTACTCTATGATAGATCGGTCAAGAGCTGTGTATACACAACAGAACAATGTTATTGGGACACTG AATGTGCTCTTTGCGATAAAAGAGTATAGGGAGCAGTGTCATCTAGTTAAGCTTGGGACCATGGGTGAATATGGGACTCC GAATATTGATATCGAGGAAGGTTATATTACCATTACTCACAATGGGAGGACAGATACTTTGCCATATCCCAAGCAAGCCA GCTCGTTCTATCATCTAAGTAAGGTACATGATTCGCATAACATAGCCTTCACTTGCAAAGCATGGGGGATTCGAGCGACT GATCTGAACCAAGGAGTGGTGTATGGGGTAATAACAGATGAAACTGCAATGCATGAAGAGCTGTATAACAGGTTTGATTA TGATGCAATATTTGGAACTGCATTGAACCGGTTCTGTGTCCAGGCTGCTGTTGGTCATCCACTCACTGTATATGGTAAAG GAGGCCAGGTAAAATACCCATCTATTTGTTTACTGTTTACTGATAAGTAGAAGACTAGCCGTTGATGATTCCCAAATGCG ATGTCAGGACAAAATAATTGGTTTATTTTGAATAAGGACATGTTAATATTGTGTGTTAGACGACAACTGAAGCAGAATCA TGGAATAGAACCAAGGAGCAATGATGAATTTTCTTAGAGGTGTCCCCACATTTTTCAATGATGAAGCTTTAACCATCGTC CCTATAAAATTGACACATTTTGTTTTTATTAGAGCCTATGATTTTTTTTTTCAGTTTTAGTCTTTCTAAAATAAAGAAGT CACGTGGTTTTAGTCCTTCACTAAACTGAATAAAGTTTTAACTGAAACTAAAATCAAACATAACAAATTTACAGGATTGA AAAATATTTGCAGCTCTTTATTATGTGATTTAGGATTATGACTTCTCTTCTTATTTTTAGGAATTTTATTCTTGACAAAA TGTAATCTTACACCTTTTATGGGATTTTTGGTGTTAGAAAACTTAGATTCTATTATGACTATGTATTTCATTAGGATTTA TCTAGAACTGTATTTAATTTAGGATTTCTATCATGGTTGGGTTTTAAATACACTTTATATACCATATGTAATAAAGTTTG CTGATTGAACATAATGTCCTTTTTTGGAGAGTAGTTGATTTGAGTTGGATGAGTAGTCTTTTGCCTAACTAAGTACTTTA TACTTATGTTTTCATCCTGGTTCACATTATAAAGTTACCAATATTGTTACTCCCCTTCTCCTGCAGAGCCATGCATGATT TTAGCTTATAGATTTCTATTGCATTAAGCGTCTAGGGATTTTGAATTCACTTCTCTGAGCATCCATTGCTGTTAAGATAT TATAATGCGGGAAGTAGTGAACAGATGAAAGTTAGCTATTTGAGAATTGTTGATAATAACTGATTAGCCTACCCACTGTT GTACTTTGTTAAATGTTGTTTTTATATCACTTCCATGTACACCTTGTTCCATGACGGTTCTAATAATAGCATAGTATGAT TCTTTTATTGCTCTAAATTCTTTTTGTTCTCTTCCTAACATTTAGTTGAACTGTTAATAAATTTATGAAATGCTCTGCTG CTAAATTTTTGTCTGATTTTTGAAATGCACATTTTTCAGACTAGGGGCTTTCTTGACATTAGAGATACCGTTCGATGTGT TGAACTTGCCATTGCAAACCCTGCAAACCCTGGGGAGTTCCGAGTCTTCAATCAATTCACTGAGCAGTTCAAAGTCAGTG AACTTGCCAACCTTGTTACAAAAGCTGGTGAGAAGCTAGGCCTTGATGTAAAAACTATGTCTGTGCCTAACCCAAGAGTG GAGTTAGAGGAGCATTACTACAACTGCAAGAACACTAAACTCATTGATCTGGGACTGAAACCACACTTTCTTTCGGATTC TCTCCTTGACTCGCTTCTCAACTTTACTGTTCAGTACAAAGATCGCGTTGACACGAAACAAATCATGCCTGGCGTTTCTT GGAGAAAAGTTGGGGTCAAAACAAAAACTGTTCCAGCCTAAGAAGGTGGGTTCATTGCTGCTGGTGTAACTTCATCAGGC ATGATGGCTCTTACTTGTGATTAGATTATGCTGCATTGATTTGAATATTTTAAATTGAGATATTGTAGGATTTGTATGCT ATCCAATCCAAGGAATGATGCATCTTTGTGAAACCTTCATACCTTAATGTAGATTAGAGTTTATTGTTTCAACCTTGAAA GTGCTTTTCCACAGCCATATCCGCAGCTAGAGTTAGGTACTGCTCTTGTGTTTTCTGTTTGAGCATTTGGAAGTATATGT ACACATACTGGTTTACTTATAACAGTACATCATATGTGTAAAACGTCGGGATACAAAACAAGTAAACAACTGCATATGGA CATAAGTGTATGAAAAATAACCGAGTCTCTATGTTTTTCAGTAGAGTAAAATTAAGTTTGATATAATTAAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0667900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCAATTACTATCATCATCGTGCTCCTTGACTATATCTTCTAGAAATAAACCTTACTTAAAACCCCTTAACCAATG TTCAACACCATTTTCTGTAATGGTTGGTTGCAATAATTCCAGATCTCCACTTAGAAGGCTTTCCTTGCGAGACCAGAAGC CGAGAAAAAGTTTTTCTGCAGTACATGCTGCTGCAGTTTCAACTAGCCAGGATACCCCAGTTCAAACTAGCTCTGGCGAC CCTTTTAAAGCAAAGCGAGTCATGGTCTTTGGTGGAGATGGCTATTGTGGTTGGGCAACTGCCCTCCACCTTTCTAACAA GGGTTATGAGGTTGCCATAGTTGACAACCTTGTTCGACGCCTTTTTGATCACCAGCTTGGACTAGATTCTCTAACACCAA TTTCCTCCATCCAGAATCGCCTTCACCGCTGGAAAGCTCTTACCGGAAAAAGTATTGAGCTCTACATTGGTGACATATGT GACTTTGAGTTCTTAGCTGAAACCTTCAAGTCATATGAACCCGATGCTGTTGTCCATTTTGCGGAACAGAGATCTGCTCC TTACTCTATGATAGATCGGTCAAGAGCTGTGTATACACAACAGAACAATGTTATTGGGACACTGAATGTGCTCTTTGCGA TAAAAGAGTATAGGGAGCAGTGTCATCTAGTTAAGCTTGGGACCATGGGTGAATATGGGACTCCGAATATTGATATCGAG GAAGGTTATATTACCATTACTCACAATGGGAGGACAGATACTTTGCCATATCCCAAGCAAGCCAGCTCGTTCTATCATCT AAGTAAGGTACATGATTCGCATAACATAGCCTTCACTTGCAAAGCATGGGGGATTCGAGCGACTGATCTGAACCAAGGAG TGGTGTATGGGGTAATAACAGATGAAACTGCAATGCATGAAGAGCTGTATAACAGGTTTGATTATGATGCAATATTTGGA ACTGCATTGAACCGGTTCTGTGTCCAGGCTGCTGTTGGTCATCCACTCACTGTATATGGTAAAGGAGGCCAGACTAGGGG CTTTCTTGACATTAGAGATACCGTTCGATGTGTTGAACTTGCCATTGCAAACCCTGCAAACCCTGGGGAGTTCCGAGTCT TCAATCAATTCACTGAGCAGTTCAAAGTCAGTGAACTTGCCAACCTTGTTACAAAAGCTGGTGAGAAGCTAGGCCTTGAT GTAAAAACTATGTCTGTGCCTAACCCAAGAGTGGAGTTAGAGGAGCATTACTACAACTGCAAGAACACTAAACTCATTGA TCTGGGACTGAAACCACACTTTCTTTCGGATTCTCTCCTTGACTCGCTTCTCAACTTTACTGTTCAGTACAAAGATCGCG TTGACACGAAACAAATCATGCCTGGCGTTTCTTGGAGAAAAGTTGGGGTCAAAACAAAAACTGTTCCAGCCTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0667900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAQLLSSSCSLTISSRNKPYLKPLNQCSTPFSVMVGCNNSRSPLRRLSLRDQKPRKSFSAVHAAAVSTSQDTPVQTSSGD PFKAKRVMVFGGDGYCGWATALHLSNKGYEVAIVDNLVRRLFDHQLGLDSLTPISSIQNRLHRWKALTGKSIELYIGDIC DFEFLAETFKSYEPDAVVHFAEQRSAPYSMIDRSRAVYTQQNNVIGTLNVLFAIKEYREQCHLVKLGTMGEYGTPNIDIE EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVITDETAMHEELYNRFDYDAIFG TALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCVELAIANPANPGEFRVFNQFTEQFKVSELANLVTKAGEKLGLD VKTMSVPNPRVELEEHYYNCKNTKLIDLGLKPHFLSDSLLDSLLNFTVQYKDRVDTKQIMPGVSWRKVGVKTKTVPA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43000:SF10
55 476 422 8.0E-234 –
PANTHER
PTHR43000
55 476 422 8.0E-234 –
SUPERFAMILY
SSF51735
85 455 371 2.59E-60
IPR036291
Gene3D
G3DSA:3.40.50.720
86 377 292 1.2E-174 –
CDD
cd05255
86 466 381 0.0 –
Pfam
PF01370
87 375 289 2.4E-24
IPR001509
Gene3D
G3DSA:3.90.25.10
293 454 162 1.2E-174 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0050662
Molecular function Coenzyme binding Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0667900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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