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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0669300 |
| Transcript ID | LotjaGi1g1v0669300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycosyltransferase-like kobito 1; TAIR: AT3G08550.1 elongation defective 1 protein / ELD1 protein; Swiss-Prot: sp|Q9C9Z9|ELD1_ARATH Glycosyltransferase-like KOBITO 1; TrEMBL-Plants: tr|Q2HRF3|Q2HRF3_MEDTR Elongation defective 1 protein/ELD1 protein; Found in the gene: LotjaGi1g1v0669300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:123201974..123210010) extracted from Lotus japonicus Gifu genome v1.2.
CTCACTTCATCCTAACTATGAGGTCAAGAGTTACCCTTGAAAATAAAACACATTCATCAGTCACTCAAAAATTACAACTA CGCATTTTTACAAAAATAGGCAGGGAGCCTCCAACCTCGTGTCAGTAATTACATAATCACATGTGTTCCATAACCCAATC CAACCTCGATTTCACAGAACCCAATATATATATATATATATATATATATCAATTTATTAAAGGAAAAGAAAAACAAAAAA ACAGCCAAAACTTGAAATCTATGAACTGAAAATACCAACGACAAAACGGCTCCATTGCATTCTTCTGTTCTCAACTCGTT TTCTTTTCAGTTTCGAGTCTTCTTCTTCATCTTCTTCTTCATCTTCATCCTCTTCAATATATATATATATATACAACATC GATCATCACCAATCTCTCTGTTCCATTGATTCATTTCATGCACCTTCTTCATCTCTCACATGGCGGGTGCACACTTACGC CACCACCACAATAGCTCTCCTTCTTCCCGCCTCCACCACCTCCTCATCCTCCTCCTCCTCACCCTCGCCTCCTTCGCCTT CCTCCTCCAATGGCGCGGCGGCGTCACCGACGACCCCCTCACCCGCTGGTCACCCGATCACCACCAGTTCCCCGGAATGT CCCTCTCCAACCAACAGCAACAACCACAACAACAACAACAACAACAACACCATTCCCATCCCGATTGCGCTTCCCTCATC GCTAACTCCCACTCTCCTTCCTTCCCCTACTTCCGTGACTGGAAACCTGATTACTCCTCCGATCTTGTTCTCTCCCCCAA GGTAACGTTCCGATCTGCGTCTCCGATTCTTAAACCCTTGCGTGATTCAGTTTTCAAATTGCAATGTTATGGATTCATGG TTGCCCCCCTTTTTTGTTGGAGTCAATTGGGAATTGTGATTTCACTGATTTTGGATTACCCCTTTTGATTATTCTATTGA TTTGTGTTGAAATTTTGAAACGTTTTGTTCTTTTTCTGATAGATATGTATTACCACGAGTACTTCAGCTGGATTGGAGCA GACTCTGCCATGGATCTTCTATCATAAGGTCATGGGAGTCTCTAGTTTCTTCCTTTTTGTGGAGGGGAAGGCTGCATCGC CTAACGTGTCGCGAGTTTTAGAAAGCATTCCGGTGAGTCCAACTCCAATCCATTCCGGTGAATTCGCAGTTGATCAAGTT TGTTTTATCTATGCCAAGTTTTGATCATGGATTAAAAACTTTCAGGGGGTAAAAGTTATATATAGAACAAGAGAATTAGA AGAACAGCAAGCTAAAAGGTAATTCTTTTCAATTTGATCTTTTTTTTTTCTTCTTTTAAATAGACAGCCTTTTTTGTTGA TTTGATTGAGCTGGTGACTGTTTACAATTGTGACAGTGTCTTTAACTATGATGATTGACACAAACCTGTAGAATATGGAT TTGAAATCTTTCTGTAATTTCAATGAGAAAATTTACTTAAGTATATTGAGGACTATTCAAAATATATTGCAATGCTAACA TGCTCTTCTGTATTTTAAGTTTGACACACGTTCTGGATCTGGCTTGGTTTACTGTTCAAAATTCAAATTATGTCTGCTTT GTTACTACAGATCTTTGGCAGCGATTTGAGTTCAAACTTTCCAACAAATAACCTGTGTATTTGGAATAGTTATAATGTTA ACTAAGTGCCTATTAGGAATTAGACATGATGAAATTCAAAATAAATGCGATAAATTGCGAGTCTGATAAGGTGTTACTGT CATAAAAAGGTGTGGAGGTGCTTAAGATATTATTCACCGAAAACTTCATTATTTTTTCTTATTTGATATGGAAGCCAACG TTAAACAATTGAACCTTTGCTTTATAGCTTAAACTAGGCTGGTCGAATAATTCTTTGACATTAGGCCAAGGCTTGGTTGA GCAAGCAGCCTAATGTTTTATTCTTGTTAGTTACCATACACTGTCTTGTAATCATCACCTGGACATAAGACTGTTTTTAT GAATGTTTCTAGTTTATCCATACATTAAGTTTTCTTTCTTTTCATAAACACCCATTGATCTTTGCTATTTCTACCCTGTC AGTAATTCACATATTAATAAAAAAAATATATGGAGGTAAGCTTTGGGCCCTTGGTGCAGTGATAAGTTTGCTGCTTTGTG ACCTGGTGGGCATGGGTTCTAGTTGCGAAAACAGCCTCACATTGGTGGTTGCCAAGTATTATGAATTGCTCTATTTTATT TAGAATATTAAATTGTGCTATAACCTATGCATCTAAGATCATGTACCACCCACCTCCATAACCTGAAGTGTTGGTTTAAG TAGTTTTTTTTCAATATTCTCAAATACTGAGTTTTTGGATTTTAAAATTGTATGCTAAACTTTGTAGCCTCCCGGCCCTC CCCGTATTGTTCTAAGTGTTTGATAGAATGTTAATACCTTATTTGCTTTTTTCTCTTTCTTTTATATACCAGCCGAATAT GGAATGAGACTTGGTTGGCGAGCTTCTTCTACAAACCATGCAACTATGAATTGTTTGTGAAGCAATCTTTGAACATGGAA ATGGCTATTGTCATGGCTAGGGTAAGGCTTATGAATTTATGATTTTTTTTATTGGAATACTTTATATGCATATCTTCATC ATGTGTTTTATCATTTTAAGAACATAAGTATTCTCTTTACAATATCTTTTTACTCAGGATTCTGGCATGGATTGGATCTT ACATCTGGACACTGATGAACTTATACATCCAGCAGGAACACAAGAGTACTCTTTGAGACAGTTGCTATCTGATGTGCCTG GAGATGTTGATATGGTTATTTTTCCAAATTATGTGAGTGCAAGAGTCTTATTTGCATCCTGAAGTTAATACCATTCGATA TAGTTAGTTCAAGAAGTTTTATTCTTCTAGAGTTTGCTATTCGTTGTTATTTTGACTTAATATTAAATATTATTTGTTTC AGGAGAGCAGTGTTGAGCGCGATGATATCAAGGATCCTTTCAGTGAGGTATTTGCTTGGATAGGTTTTCTTAGTTTTCAA ACAGCTGATTCAGTTAATGTTGTCTGGAGATAGTTGTAGATTTAGGTCCTATTGGCCGTTAGCTGTTTGTTGTCTTTGTT GAGCCGTATTTTTTTGTGGAAAATAAAATATTCATTGAAATGAATTACTAACATTTCTTTTAAAACTTTCTCTTCAAGAA ATAAGCTTATCGATATTTTTGTACACCATTTTATATAGACATGCAAAAGCAGACACATGCAGAGTCATTCATCTTATAAG AGAGTTCTGTATATTTCTTACGACGAACCTTTGACCGACTCAGATGCATCAATTAGTATTTACACTTCCTTCATTACAAG GAGCCCTTTTACTGTGTCTATTGAAGAGAGAAGAAGTAGAGATTAGTCTTGTAGAATTGTGTATTCAGTCATTTAGAAAT AAACATTAAATTTTAATGTGGTTGTTGTAAGTTTTTTTTTGAAAAATTTAATTTATACTTTAATCAAAAGTGAAAATAAT CTATTGGGGTTAATGCCATTGTTTCAGATCCAGGTTTTTACTATCAGCATGTTTGGATTTTCATATATCACCTAGAATCG ATTCTGCATGCTAGAAGCTAAGAAGAGTTGCTTCTCACTTTATACTTATTTCATAACCAATTGTCTTTTTGGGAAACTTG TTACTATTCATAGTTCCAAGCATGCTATATGTTGTGTGGGTTTTCTGTTGCTGGGTTCAACTTTTTACCTTTATGAAACC TAGTATATTTGTTGATAGTTTTAAGTTGCAATGGTGTCATAGGTTTCAATGTTCAAGAAGAACTTCGACCACCTTCCAAA GGAGGTATACTTTGGAAATTACAGAGAAGCAACTCGTGGCAATCCAAACTATTTTCTTACTTATGGAAATGGGAAATCAG CTGCTAGGGTTCAAGATCATCTCCGTCCTAATGGTGCACACAGATGGCACAACTATATGAAGACACCAAAGTATGTTGAT TCTCCGTGTCTTAATTAATGAGCATGCATATGATAACACACATGCATATATGTTTATTTATAACCAACATTGATTTATAG TTCAGAGGAGATATTACTGAATCTACATGTATTTTGAGTTTAATAGTACGACCGCTTAACCTGCTGAGAGTCTAACCATC AGAAGTTCAGAACTGCTGATCTTATATTAACTATTCTTTCCAATCTGCAAGAAAGTTATGCTATCTTGATCAGGCCGCCA TTATTCTTATGTGTTGACTTTTTCTGTTTTGATTATTTTCTCACGTAATTAGCTGCTTCTTGGTGTCATTTAATTGTAAA ATGTTGAAAAAGTCCCACATTGACCAGATCTATGGTCAAATAAGTCTGTATATTAGGTAGAGCAATCCTCACCCCTAGGC TAGCTTTTGGGCTAGAGTTAGGTCTAACCCAAATTCTAATATGGTATTAGAGTCTATCCTGGATTTGTTTAGTGTGTCAC TTGTAAAATGGAAGACCCGCAAATGTCCAGTCCTGCGACCTTTACGCTCCAGATGTCCAGTCCTGAGCTTGAGGGTGTTG TTGAGAAGTCGCAGTGTCTCACATTGACTAGAGATATGGCCAAATAAGTCCATATATTGGGTAGAGCAATCCTCAGTCCT CACTACCAAGCTAGCTTTTGCCGTAGAGTTAGGCCTAACTCAAATTCTAATACAAACCATTCAAATAAAATGTATAAAGC CATAATGTTAACAGTGAATAATGTATTGTTTTTGTCCATTGACTCCATTCAATGATCTGTATGCCAAATATTTTAACAGT GAGATCAAGTTGGAAGAAGTTGCTGTTCTGCATTACACTTATACCAAATTTTCTGATTTGACTTCAAGACGTGATCGTTG TGGCTGCAAGCCGACAAAAGACGATGTTAAAAGATGCTTCATGTTGGATTTTGACAGACAAGTAAGTTTTTATCGTCTTT TGCATGCTCTCTTTGCTTCTAGTTCTAACTATTACTAGTTTCATCCATAGTGATGATTAATGTGTTTTATCTGTGATTGC ATTCTTCTATTCCAAAGATTTTGTACATCTACGGGTTTGACATTTGATGTGTGTTTAAGGCCTTGTGCCCACTTTACCTG GTTAAATCAGAGCAGAAGTCTTGTTTTGTTTTGTTATTTTCTGTGATGGTTATATGACCATCCTCAGAATTTTCTGTCCT TTCTTACATTTATAATTAGTAGTTTCCTTGTTTACTAGTAGTTGAGTTCTCATACACCCTTCCTTCTTTTTATTTTCTTG ATAGCTAAGCTAGCCTAAAGAAAGATTCAAGTGGGATTTTTACATTCGAGTTTATTTTTGTTTTTTACTTTCTATCATGT TAGAAGGTGAAGCTGTGCGTGTGTACATTTTGGTGTTTTTTCTGACAACTCTGTTCTATGTCTGACAGGCATTCATAATT GCTTCAACTGCGACCGAGGAAGAAATGCGTCAGTGGTGAGTTCAGGAATATGAAAATAAATATTTAATTTTTTTCTACAA GTAATGATCTTTGTATTCATTTTTTCCTTTTTTTTTGTTTTTTTTTTTGGGGGCGGGGGCAGTTTAACATTTTGTTGAAT ATATGTTAGTAATAGATAGTGTAGTTGGCACTTGGCACGATAAACAGAAGAAGGCTACAATTTGGAATTGTCTGAATTCA TAGGTGTAATTTAGTCATGAGCCGCGAGGGGAATGAATTGAAATCTATACAGATCACTGCTTGTTATTGGGTGATTCGTT GGCAGATTCTTGAGTAAGAATTTGTTGGATATAGCAACAAAAAAAACAGATAAGTTATGTTGGAACTAGGTGTTACTCAC TGGATGTATATGAGATACTTATATGGATAAAATATTTTACACTTATAACAAATTTTTTCATGAAATAATGAACATTAGAT ACTATATGATGCAATGTGATATTTATCAAAATGCTATGATTGAAGTTATAAGATTAATCATATATGTGGCTCTTACTCTG CTAAAATTATTTTCTGGTTTTGAACATAATAATACCTCTTCTTGTATGTTTAGTCCACAGCATGGCAAACATGCATGTTC CATTTGGCTTGAGACCTGAAATTATTTTGCTTCTTAAATGGTTTCTTTTTGTTTCATTTAGGTATCGGGAACGCATTGTA TGGGGTGACAAAGCACTTAACATGAAGCTTATGAGGAAAGGAATTTTGTCTCGCATTTATGCTCCCATGGTATGTTCACT TGCCTAAATTTGCTTTCTGGTTTCTCTCCAAGCAATTTATTTAGTTTTCATCAGCACAGTTATGAGAAAACATTGTAAAC TTTACCACCAAAAAATTATCTTTGCAGGTCATTATTCAAAGTTTGAGGGAATCTGGTGTTTTTAGCTCAGTGATTGCAAA AGCTGCTCAAACAACAATATCAAAAGAAAACTTTTTACAATCTGTTGAGAGTAGCAATTCAACCCGGAACGCCAGATCAG AAAAGATCTCTCATAGAAAAATCGATGCTGGTGGATTATCCGAAACAACTGCAAGAAGGATCTTGGAAGTGATAGATGAT TCAATGCCCTCTGCAATCCCTCCATTATCGCCGCCTAGCCACGACCACGCTGACCTCATTACGTCTTAGTTTTTGATTGA CTCCTTGTCATGGCCAGAAATTATTTTTGAAGATAGTTCTGATACCCATTGAACTGTGGTGAATATCAAACAATACAATG ATAGAAGCAACTCTTACTGTCATGACGGGCATTCCAATTTTTGGATTCATGGGGTTTTCCGATCATTTACCCAAGCGCCA CTTATGTAAATTTCAGGTATAGATTGCAGGCTTAGTGTAGGAATCATAGTAGAGCAGATTTTGCTAGGATGTTCATGATT CTTTTTTCTTCTTCCTTATCTTTAATCTTCTTTTGATACCTTTCTTCCCAACCTATTTTTAGAGACTTTGGGGCATATTG GCGGCGATTGTAATGGAAAATAGTGGCCTATTGTATTTTTTTCATACACATTGAGAGATGATATTATACAGATTGAGATT TTCTCCCTTGGTTTGAAGGAGAATTGGAGAAATGATTTATACAACGAAAATGGTATTTTGCTGACAGTGGAAATGATTTG AGCGCCCTTTATCCGAAGGGAAGTGAAAGAGTTTTTGTTATTGGTCAAGTAGCCCACTTCTTTTGGAAAATGATTTGATG AATGCCTGTCATGGGTTAATTACCCATGGGAACCTTCAACCTTTAAGCTCCATGTCTGCAAGGTTCATATTATCAAGGAA GCTTTTGAATAATCCATTCTATCATGGGTTCAAAAACATAACTAAAGCTTTCCTGAAACTGTTATTTAACATAAACTGAA AGTGGCGTGGCAACATTTTTTAGAGCCAGATCCATGGAAGAAAAAATGCTTGATTGTGACAATGGAAACCAGAAATGATC TTGGCTACGACGACTCTGGTTTCTTTTACATGTTTTTTAGTTTTTTGACACTATTTTGTCTTTTTACATGCTTTCTTCTC TGGTTCCTAATGAGTCTGGAAACATGGGTGTTACTTCCAAAATATCAAATTCGGAAGGTTAAAGTAAATATCGTTTGCTG GTCGATTCCAAGGATCTCAGGGAACAGTAGAATCATGGTATATTGATCGGGAAGGTCTCTCTGAATTGGTTGAGTGCCCA AGGTCTCCTCAAGAAACAGCTTTGAACGGAGGGAATGCATTCGGAGGAGCTAAGGACCTCGAACGGGATTCAAGTGAGGA AACTCTAGCATTAAGGTGAGTTTTTGTGTAGGTCAAGGTGAGCAAGACTGATCGAGACGCGAGAAGGAACTCAAAGCCCA TGGCCACAACTAGAATCTTTTGCGTCTAGAACCCACGATCTCTTGGATTTGGAAGCTTTACGCACTAAATACCATACACC CACGATGGAGGTGGTTACCATAACGTGGGAGAAGATAGATCAAGTTGAGAAGGGAACCGAGTTCGAGATAGGAGCTTGAG AAAAGACAAGTCACGCCGAGGAAACAACTCAAATTAG
CDS sequence (LotjaGi1g1v0669300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGTGCACACTTACGCCACCACCACAATAGCTCTCCTTCTTCCCGCCTCCACCACCTCCTCATCCTCCTCCTCCT CACCCTCGCCTCCTTCGCCTTCCTCCTCCAATGGCGCGGCGGCGTCACCGACGACCCCCTCACCCGCTGGTCACCCGATC ACCACCAGTTCCCCGGAATGTCCCTCTCCAACCAACAGCAACAACCACAACAACAACAACAACAACAACACCATTCCCAT CCCGATTGCGCTTCCCTCATCGCTAACTCCCACTCTCCTTCCTTCCCCTACTTCCGTGACTGGAAACCTGATTACTCCTC CGATCTTGTTCTCTCCCCCAAGATATGTATTACCACGAGTACTTCAGCTGGATTGGAGCAGACTCTGCCATGGATCTTCT ATCATAAGGTCATGGGAGTCTCTAGTTTCTTCCTTTTTGTGGAGGGGAAGGCTGCATCGCCTAACGTGTCGCGAGTTTTA GAAAGCATTCCGGGGGTAAAAGTTATATATAGAACAAGAGAATTAGAAGAACAGCAAGCTAAAAGCCGAATATGGAATGA GACTTGGTTGGCGAGCTTCTTCTACAAACCATGCAACTATGAATTGTTTGTGAAGCAATCTTTGAACATGGAAATGGCTA TTGTCATGGCTAGGGATTCTGGCATGGATTGGATCTTACATCTGGACACTGATGAACTTATACATCCAGCAGGAACACAA GAGTACTCTTTGAGACAGTTGCTATCTGATGTGCCTGGAGATGTTGATATGGTTATTTTTCCAAATTATGAGAGCAGTGT TGAGCGCGATGATATCAAGGATCCTTTCAGTGAGGTTTCAATGTTCAAGAAGAACTTCGACCACCTTCCAAAGGAGGTAT ACTTTGGAAATTACAGAGAAGCAACTCGTGGCAATCCAAACTATTTTCTTACTTATGGAAATGGGAAATCAGCTGCTAGG GTTCAAGATCATCTCCGTCCTAATGGTGCACACAGATGGCACAACTATATGAAGACACCAAATGAGATCAAGTTGGAAGA AGTTGCTGTTCTGCATTACACTTATACCAAATTTTCTGATTTGACTTCAAGACGTGATCGTTGTGGCTGCAAGCCGACAA AAGACGATGTTAAAAGATGCTTCATGTTGGATTTTGACAGACAAGCATTCATAATTGCTTCAACTGCGACCGAGGAAGAA ATGCGTCAGTGGTATCGGGAACGCATTGTATGGGGTGACAAAGCACTTAACATGAAGCTTATGAGGAAAGGAATTTTGTC TCGCATTTATGCTCCCATGGTCATTATTCAAAGTTTGAGGGAATCTGGTGTTTTTAGCTCAGTGATTGCAAAAGCTGCTC AAACAACAATATCAAAAGAAAACTTTTTACAATCTGTTGAGAGTAGCAATTCAACCCGGAACGCCAGATCAGAAAAGATC TCTCATAGAAAAATCGATGCTGGTGGATTATCCGAAACAACTGCAAGAAGGATCTTGGAAGTGATAGATGATTCAATGCC CTCTGCAATCCCTCCATTATCGCCGCCTAGCCACGACCACGCTGACCTCATTACGTCTTAG
Protein sequence (LotjaGi1g1v0669300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGAHLRHHHNSSPSSRLHHLLILLLLTLASFAFLLQWRGGVTDDPLTRWSPDHHQFPGMSLSNQQQQPQQQQQQQHHSH PDCASLIANSHSPSFPYFRDWKPDYSSDLVLSPKICITTSTSAGLEQTLPWIFYHKVMGVSSFFLFVEGKAASPNVSRVL ESIPGVKVIYRTRELEEQQAKSRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMARDSGMDWILHLDTDELIHPAGTQ EYSLRQLLSDVPGDVDMVIFPNYESSVERDDIKDPFSEVSMFKKNFDHLPKEVYFGNYREATRGNPNYFLTYGNGKSAAR VQDHLRPNGAHRWHNYMKTPNEIKLEEVAVLHYTYTKFSDLTSRRDRCGCKPTKDDVKRCFMLDFDRQAFIIASTATEEE MRQWYRERIVWGDKALNMKLMRKGILSRIYAPMVIIQSLRESGVFSSVIAKAAQTTISKENFLQSVESSNSTRNARSEKI SHRKIDAGGLSETTARRILEVIDDSMPSAIPPLSPPSHDHADLITS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_EUK | 1 | 33 | 33 | - | – | |
| PANTHER | 6 | 523 | 518 | 1.9E-302 | – | |
| PANTHER | 6 | 523 | 518 | 1.9E-302 | – | |
| TMHMM | 21 | 38 | 18 | - | – | |
| Phobius | 21 | 38 | 18 | - | – | |
| Phobius | 39 | 526 | 488 | - | – | |
| MobiDBLite | 54 | 83 | 30 | - | – | |
| MobiDBLite | 57 | 83 | 27 | - | – | |
| Pfam | 128 | 362 | 235 | 8.6E-5 | ||
| MobiDBLite | 466 | 486 | 21 | - | – | |
| MobiDBLite | 506 | 526 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0669300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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