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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0669600 |
| Transcript ID | LotjaGi1g1v0669600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein FATTY ACID EXPORT 1, chloroplastic; TAIR: AT3G57280.1 Transmembrane proteins 14C; Swiss-Prot: sp|Q93V66|FAX1_ARATH Protein FATTY ACID EXPORT 1, chloroplastic; TrEMBL-Plants: tr|I3SPE9|I3SPE9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0669600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:123235621..123239399) extracted from Lotus japonicus Gifu genome v1.2.
TATTTTTTGAATAAAGTAATATTAATATTTTAGACAACACAAGTGGTCAAGAGGAGTTGGTGAGTGGAGGAGCCGACGAC GACGGGTCATTCCCGCAACGATCTTTCACATCTCTCAAATTCAACTTTACGGTGCGCCAAATCGAACGACTGTTGAATCT CCGATCCGATGAGATCAGGCATGGCGGCGGCGATCTCTCACCCTCACCTCTGCTGCCTTCATCGCAGCCCCTACCTCCGG AGTCGCTCCCTCACCTACACTCCCCTTCGCTCCAAGGTCTCAATTTTCCCCTAATTGCCTCAACTAGTGCTTTCTGAATT TGTTGCTTTTACTTCTACATGAACTCAAATCAAAATGCCTGTTCATACAATCCCTTTTTTTCATTAACATGATGTGGATT TTACTTATTTATAGCTTAAGGGTGTGTTTGAGTTAACAACTTAATTGAGCGCTTTGTCATAAGCACTTATTGAGAAGCTT GATTGATAAACTTTTTGAAACAAGATGAAATAGACTTATAAGTAGGTATAATTGCTTATTCGTAAGCTAATATGAAAATT AAAACACCTTGATTAAGTGCTTATCCCATAATTCGTCAGCTTATTGAAACAACATTAAATAACTTATAGGTAGGTGTACT TGCTCGTAAGTTATTATGAGCAGCTTATGACAATTTAAACAGCTTATTGGTAGGTTATAATCTATTTTTCATAAGTTTAT CCTGACACTTGCATGAGTGCTTACAACATCAAATAGGCTCAGGGTTGTCAATAGCGCGTTATAGTGATGTAGCGGCACAT AGTGGCCCTTGGCCGCTCCTAGTTGCTGCGTAGCGGTGCGGTTAAGTGTAGCGGCTGTTTTGGCCACTAAAGCGGAGGAA ATAGCAGGCATAGTGGCGCTATTTGGCCGGTATTTGATGGAACTGATATAAACCCACATAAAGTTCATGTAGGGCATTTT GGGGAGGTATTTCAAGGTTTTTGCTTCGGAAACATACTGAAAATAGTCTAGTTTAAGGAGGATGAGGAGGAAGTGATATA AAACTTTCATGTCTTTTGGCAGTTTGGTTTAGGATTTAGAGACTTAAACTTCTTGGTTACCTTGACTTTTGTTGGTACTA GTATGTTTTGTTTAAGACACCTATGACTTTTTTAATGTTAATTATGAGCGCCATGAATTTTGAGTATTTTTTTATCATTT ACATGTATCTAGTTATATTATATACAATATACAAAAATTCAGCATAGCGGCCATCTTGCTATGCACAATACTGCAATAGC ATTTTTGTGGTCAGCCGCTGTTCGAGATTGACAACACTGTTCCAAACACTACCTTATTCCCTTTTGATCGTTAATCTGTG CCTGGTGTGCTATCTCACTTTTCTTCTACTGTTCACTTGCTTGATGCTAAGCAGCGGTGCACTTCATATTTATCTTTTGA ATTTGGCATGTATAGCTGCTTGTAGGTAGGAATTTTTCTCCGCAGGTACTGGTAATGAATAAATGCTGTATCTGCATCTG ATTATAACGAGCATGAAGAACAGGGCGCTGAAAGTGTAGATGATGAAGTTGCCATTAATGACGTGATGAACACGAAATAG TTTGATTTTAGTATATTGGCATGTTTCTGTGCCGTTAAAGTCATGTCAAATTATATGCTTGCATATGTCACTTTTAGATT GCAATGCATAGTGCAAGACATGATAAACAGGCTTGCATGACAACATAATTAATGTGTTTTTGTTAAGTGAAAGTTTTCTA GAGAAATTATTTGATATTGATACTAAACAGGAAGCATATCTCATATAGTTATCAGTTGTTATGAGTCTGGAGAGGCAGGG CGCAGATACTGCTGGTTCTGACGCCAAAAATAGCCTGAGTTATGCAGCTGATATGACAAAATTGCATGTAGAAGAAAAAC AGGAGCCATATTCAAAAAAGGACAACCATGATGCTGAAAAAGCAGGGCTTGCAGAGGAAGGTGTTGCTCAACAACAGAAA AAAACTGCTAAAATTCATGATTTTTGTTTAGGCATTCCCTTCGGTAAGTGTTCCATGTTTAGATAATTTGCATGGTATGT GACTTTCCTGTTAAGTCATAATGCATTTCGCTTTTGGGTTGGTGGATTAAAGTTTGGTTCAATAGCATTTTTAATCTCTA TCTCTGTCAACATTAACAATCAAAAGTCAAAACCCTTTCCTCACAGGTGGGATTAGGTACATAGATCAAACAATGTTATA ATGTCTTACTATAAATCATGTCTAGTCATGATAGACCATTTTAACCTAAATACTTCAATAGTAAACACTTCTTAATGTTG TTAAATCTAGGTAAGGTGAGATTGAATCTAAGTGAAAGGGAAAAGGAAATGATTATTCTTTTTGTTCAAAGGATGTTGTA AATTATGTGAAAGATCTTTGAATAGCACAGTAATTCGATTTATCTTCAAAAAGGCTTTATGAAGGCAAGTGTTAGATTAT GGCTTATTAACCTTTCTACATCTATCTCGTGGTTTTAATATCAAATGTTAGGCTGAACAGGATATAGAAATTGTGGATGG CATTTTGATTGTAACATCAATAATAGGGAAATATGGTACTTTATTTCAGTATAAAAAATGATAATTTGTCCTACTAGGAA ATTTACCCTTTCTTTAAAGACTTGATCTGTAATCTTTTCTCCTGATTGTAGGTGGGTTTGTTTTAGCTGGAGGGATTATT GGATTCCTTTTTTCACGGAGTCCTGCAACACTGAGCAATGGTGTGCTCTATGGGGGTGCTTTACTATTCCTCAGCACGTT TAGCTTGAAGGTCTGGAAGCAAGGAAAATCAAGTTTACCATTTATTCTAGGACAAGCAGGTATATGATTTCATCAAAATT AAGACATATTGGTCTTCAAATTAAAAGGAAAGATACAATGCTGCAGCATGATGTTAATTGGATTTTGGATAATTGTTGTT TAATCTCTCAATTTGTTTCCTTAATTTGCAGCATTATCTGGGATCCTTATTTGGAAAAACTTTCAGAGCTACTCATTGGT ATTACATCTATTTTTACGAAGACTGTCCCTACATTGTGCCCCATTTCATTGCAATAGTTAATTAGTTATACTTACATGCT TTTCTGGATGCAGGCAAAGAAATTATTTCCAACTGGCTTCACTGCTATTATAAGGTATCTCAATCTGTGGCTTCTTACGT GTTAATTATTTTTGTTGGTGAAATATCTTATTCTTCTTTTAGCCTATTGGTTGCAAGATTGTCCTGACTTTGGTCTGACT GAATTTTATTTGCAGTTCTGCAATGCTCTGCTTTTATTTATATGTTCTTATCTCTGGAGGAAACCCCCCACCTAAGAAAT TGAAGCCTTCTGCCAGCGTTGCATGATGAGATAATCAAGGTCATGTTGGCCTATAGAATATGGAAGATGTAATTTTATAC TTTTCTGTGAATTTAAATAAGGTTTTAAGTTAATTTGGCCATGCCACTATGGTGAAAGTAGGTCATCAAAGAGGTGCCAA TGTGATTTTTGCATTAGATTATTCCTAGGCATTTATTGAATTTTATACTAGCTATGTGAAATTTAATGGAAAAGCTCATT TTGCTTGTTACAGCTACCTAGTTTCAATACTGCTGACTACATGGCGCATGTATTTAAATTTGAGGATATAATTTCGTTCC AAGAACACATGGTTTGTGACATTCATTTACTATGATAGTTCCAAATTTGAGTTTTTTGTTTTTTATCTTTTTATGCGGAA CACATTTTCATAATCATAT
CDS sequence (LotjaGi1g1v0669600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATCAGGCATGGCGGCGGCGATCTCTCACCCTCACCTCTGCTGCCTTCATCGCAGCCCCTACCTCCGGAGTCGCTC CCTCACCTACACTCCCCTTCGCTCCAAGTTATCAGTTGTTATGAGTCTGGAGAGGCAGGGCGCAGATACTGCTGGTTCTG ACGCCAAAAATAGCCTGAGTTATGCAGCTGATATGACAAAATTGCATGTAGAAGAAAAACAGGAGCCATATTCAAAAAAG GACAACCATGATGCTGAAAAAGCAGGGCTTGCAGAGGAAGGTGTTGCTCAACAACAGAAAAAAACTGCTAAAATTCATGA TTTTTGTTTAGGCATTCCCTTCGGTGGGTTTGTTTTAGCTGGAGGGATTATTGGATTCCTTTTTTCACGGAGTCCTGCAA CACTGAGCAATGGTGTGCTCTATGGGGGTGCTTTACTATTCCTCAGCACGTTTAGCTTGAAGGTCTGGAAGCAAGGAAAA TCAAGTTTACCATTTATTCTAGGACAAGCAGCATTATCTGGGATCCTTATTTGGAAAAACTTTCAGAGCTACTCATTGGC AAAGAAATTATTTCCAACTGGCTTCACTGCTATTATAAGTTCTGCAATGCTCTGCTTTTATTTATATGTTCTTATCTCTG GAGGAAACCCCCCACCTAAGAAATTGAAGCCTTCTGCCAGCGTTGCATGA
Protein sequence (LotjaGi1g1v0669600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRSGMAAAISHPHLCCLHRSPYLRSRSLTYTPLRSKLSVVMSLERQGADTAGSDAKNSLSYAADMTKLHVEEKQEPYSKK DNHDAEKAGLAEEGVAQQQKKTAKIHDFCLGIPFGGFVLAGGIIGFLFSRSPATLSNGVLYGGALLFLSTFSLKVWKQGK SSLPFILGQAALSGILIWKNFQSYSLAKKLFPTGFTAIISSAMLCFYLYVLISGGNPPPKKLKPSASVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 107 | 107 | - | – | |
| PANTHER | 33 | 226 | 194 | 2.4E-79 | ||
| PANTHER | 33 | 226 | 194 | 2.4E-79 | – | |
| Gene3D | 90 | 213 | 124 | 2.9E-11 | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 108 | 127 | 20 | - | – | |
| Pfam | 109 | 207 | 99 | 1.4E-15 | ||
| Phobius | 128 | 138 | 11 | - | – | |
| TMHMM | 134 | 156 | 23 | - | – | |
| Phobius | 139 | 156 | 18 | - | – | |
| Phobius | 157 | 162 | 6 | - | – | |
| TMHMM | 161 | 178 | 18 | - | – | |
| Phobius | 163 | 181 | 19 | - | – | |
| Phobius | 182 | 192 | 11 | - | – | |
| TMHMM | 193 | 215 | 23 | - | – | |
| Phobius | 193 | 212 | 20 | - | – | |
| Phobius | 213 | 229 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0669600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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