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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0670400 |
| Transcript ID | LotjaGi1g1v0670400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Triose-phosphate transporter family protein; TAIR: AT5G04160.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160; TrEMBL-Plants: tr|V7CZ39|V7CZ39_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0670400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:123407373..123412005) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGACACAAGGGAGCAAGGAGAGCCTGTTCATATGTTTTCTGGTGACCCTTTGGTACTCATCAAACATTGGTGTGAT CCTTCTCAACAAGTACCTTCTCTCCAATTATGGTTTCAAGTTTCCAATCTTCCTCACAATGTGTCACATGTCTGCCTGCG CTGTTCTCAGCTATGTCTCCATCGTTTTCTTCAAGATTGTGCCGCAACAGATGATCAAATCCAGGTCCCAGTTCCTAAAG ATTGCAACTTTGAGCGTAGTTTTTTGTGGGTCGGTGGTTGGTGGTAACATCTCCCTCAGGTACCTGGCGGTTTCGTTTAA CCAAGCGGTGGGGGCGACCACGCCGTTTTTTACGGCGGTTTTTGCTTATATGGCTACGCTTAAGAGGGAGGCTTGGGTTA CCTATGGTGCTCTTGTTCCTGTTGTTGCTGGGGTTGTGATTGCAAGTGGGGTATGTTTTTTTGTTGTTGTTGTTGTTGTT TGATTTGATCTAATTGTCTGTAATCTCAGTGTTTTTTATTGATTTATGTTTTATTGTAGTGAGTGGTCATGATATATAGA TATGTGTCTTGGTTGATTCATATTGATGTGTGAATGATGTTTGTGACATTTTACATTGATATATGGTTTTGATTAACATG TGATGTTGCATCAAGTCACCAATGCCAATCCAGATCTGGATTACTGTTGAACAAATTAGTTGGTGGTTGTTTGTGCGGTT CAGCTGATCTGTGATTGTTTGAGTATATGTTTGGATACCTTATGGCACTGATGCTAACCGGCATTAACACTCATTTCGAG TCAAAAAGTGAATATAACTCTTCTTATGGATTGGATAAATGTGTTTTTACGTTAACTCTGTTGGTATCCAAATACACATA AGTTATTTGTTTTTCTTATGATCCCATATATGAGTATAGCCTCCTTCGAAGTGAATGAGATCTCAACTTTTCAAGAACTG CAAATATGTGACAATTCTTGTTTATTTTTATTACCAGCATGAAATGGATGAAGGTCCTCTGTTGTCTTCTTCCTCTTCTT CCTTCTTCCTTTTGAGCTATGCACTCTGGGGTTTATTAACTCATATCAGACAGCCAGATTTTTGTGTACTTTTTTAATCA AGCAGCATTGAATTCTGAATTCACTTAACTAGTTATGGTATTTCATCTAATTCTACGATATACATTTAATTCTAGGATGT GTCATTTTTTTAATTTTCATACGTATGATGGGTATCCAAATGGGGTTCATAGTACCACCCCTTAAACTTGTCATGAACCA GGCTCTTTTTAGCTGTCTACTTTTCTACTATGGTGGCATTCTGTGCATTTCTCCACACCATGTTATGATTAGATGATTTG TTATATGACTGGCCAAGGAATAGTAGTTCTTTTGGACCTGCATGGTGCATATTTCCTTCCTATGTTCCATCTGTTAATTC AATTTTCTTCTGTGGAGCTCTAAGATTTTCTTGGTGATGGCAGGGTGAACCAGGCTTTCACTTGTTTGGATTCCTTATGT GCCTTAGTGCAACCGCTGCAAGAGCATTCAAGTCTGTTCTTCAAGGCATTTTACTTTCTTCTGAAGGGTAAAGTATTTTT TCACTGTCTATAATTTTTTACTTCTTTTTGTCATTTAACTTAAAAAACTATCCCATTTGTGATTTGTGAGAATGGTGGAA ATCTTTTCAAATTACACTTTCATGCAAACTACACTTTTAGGAGCCATAGATCATTTTGAGGAAAAAAAAATATCTTTTTA CTACTTTTGTAATTAAGCATATTGATATAACTAATTACTTGATGCATGCTAGATAGGTTAGCAGAACAGTCCTTACCCGA AGAAGATGATTTTCCATTTTTTTAACTCACCATTGTTCTTATACAATTAAAAAAGAAACATTTAAAATTTTATTGGGAAT TGATCCTCTACGTGAGATTTTCACATACAAGGTATGTGGAAATTTTGTTTCTATCTCTCTTCATGAATTCATAAATGTTT GTAAAGCCCTATTTAAGAAGAGAGATACATACCAATAATTTGCATGGCCTTGTTGAGTGAAAATTTCACAGCGGGTCTTT TCCCAATTTCTGATATCCTGAAGTTTTTCATAACTTTTTATGCATTCTACTTACTTACATTAAAATTCATTTGGTAAGTT TCCTATTTGTTTCAAGTAATACTGCAGAGCAGTAATTAACAGGGTTTCAAATTGTTGTTGCGGTTGCCGTTGCATCGCAG AATTGCGGACAAATGCGGATTGATGCAGCCGCAATTGTGGTCGCAATGTTGATGTGAGGACTCCAATACCTGTTATGTTG CGGCCACAATTGCGGTTGCAGAGCGCTATTTGAAACCCTGGTAATGAATGCCCTTCTTCATCACACTACATCCAAACAGT CGGCATCTTGATGAGATGTGGACTTTAGGAGGTGATTATGTGGAAACACATATTTCAAGAGGCAGAAATAGTACTTAACT TGAGTGAAGGCAGTTAAAACATGACAATACTTCTAAAAGGTCAATTTCTTCATCGTCATTGAAATCTTGGATGGTTTTTG TTCCATCATCTATACCTCTTCGGTAGTCTTCAATTTACAACCTGACAAATAATTACTTTTTGCTACATGTTCTGGGTTGC ATGTTACTTTTCAGTTCCTGACCAATGGAAGTTCCTATGCTATTTGGATTTCGGTAAATAATTTGTATTTAACCATACAT AATAGGAAAATTTGTGAAGGAGATGTACTTAGTATTCAGTACTACGGGAGTACAAATGAATTTATGCAATTTTTTTGAAA GGATTAATTCTTAACTTTCTGTTAAACACGCACGTGTCCGGATTCTGCTTATTTTTTCATTTATCTATGAATTATTTGTT TACAAGCACAAAAGTTTGGTTGGGTTTTGCTCATAAGACTATCTGTTCTTTCCCCTTATAACTTTGAAACTCTGCCTGAA TTGTTTGTACTTACTTACAATACAACTTGAAATATTATCATATTCGTCTTGTCTTTGCAATAAGTATAGGATATTTTTAT GTTCGTCGAAATTATCTATAATGCTATAATTATGACCAGAACTTTAGGGTTCCTCCCTCTTCATGATCTCTTGTACTTAG TAAACCAAAGTGAGTGAGCTTTTTTTAATGCCACAAACGGATTATAATGTTGCATTCACTTCAACTTGACAGGGAAAAGT TGAACTCCATGAATTTGCTCCTGTATATGTCTCCAATTGCGGTCCTAGTTTTGTTACCTGCAGCGCTTATCATGGAGCCT ACTGTTGTAGATGTCACATTGACGCTTGCAAAAGACCATAAATCCATGTGGATACTTCTTTTGCTGAACTCAGTCACAGC ATATGCAGCAAACTTAACCAACTTCTTGGTGACTAAACATACAAGTGCTCTCACACTCCAGGTTTGCCTCTTTTTGTCTC TTGTTGCTCACTATTTTGCGAGAACTTATTTAGCTAAAAAGAACATTAAAAACTTAAACCCAAAGACTTTTAATTATTAG AACACTGCATTATTGTAGGATATTTTGAAAACTTTATTCACATAATTTTGTTTAATGTTTTCCTATCACACAAAAATTTC AAATCATACATGTTTGCTCTTCCACAGTTTTTGCAACCCACAACTTCATATGCTAGTATTTGTTGAAGGAGCAAAAACAG TACTTGATGCTAAAAAATAAAAGACTAGCCTGTAGATAACAAATACATTCTTTCTGGTTTAGTTTTCTTCTGGAAAAAAA AGCTAACTTCATCCTGCCTAACTTCCTTAGACAGTTTTATTGATGTTGACCCGATAATCGATAATCCATCTAGTCCTTTT AGATATTTGATTTTGTGCAAGTTGCTTCCTTGGGTTTTAATAGCTTATAGCATCTTTGGATCAACTTATTTGTGTAGCAT TCAGAAGCTACTTATAGCAGTGCTATTAAATATCCGCCATGGTGGGTTTTTGTGAAAACGCCATACAAAAGTCATGGTGT GGCGGAAATGGTGTGGCGGCTCATGGCGAGCACCATGACTATTGCAGATTGCGGCGCCATGGCGGACAGAGCCAGATTTG TTTGGGGGTAAAAAAGAAAAAGTCAGGCCCATGGTTTTTTTGGGCCCATTTTGGGGTTTCAGCCCAAAAAAAACACTAAT TTAACAATACAAACCCTAACTCTCCTCTCATTCTCACCAAACGTCTCTTACCTCTTACATAAGCTTCTCCCCTTGATTTT GGCTTTAGAATCAAGTGTAGAAGAATTTCCAAACATGCACTTAATCAGACATAAAATCACGTTAACCATTGCAGGTTACT AATTGCGAGTCAAAATAATGGTGGACAGAAGCGACTCCCCTTAACTTTTGATTATATATCCACTATGATTTTGGCTTCAC CATGGTTTTCTACCGTTAACTAAACATGCACTTAGCGTGTTATTTTATGCAATTCACACACTGATTTCCCTGTGAAATTA TGTTAGGTATTAGGCAATGCAAAGGGTGCTGTAGCTGTTGTTATCTCAATACTCATATTCAGAAACCCAGTCACTTTTGT TGGTATGGCTGGCTACACAGTTACCGTGTTGGGAGTTGCTGCATATGGAGAAACTAAAAGGAGGTTTAGATGA
CDS sequence (LotjaGi1g1v0670400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGACACAAGGGAGCAAGGAGAGCCTGTTCATATGTTTTCTGGTGACCCTTTGGTACTCATCAAACATTGGTGTGAT CCTTCTCAACAAGTACCTTCTCTCCAATTATGGTTTCAAGTTTCCAATCTTCCTCACAATGTGTCACATGTCTGCCTGCG CTGTTCTCAGCTATGTCTCCATCGTTTTCTTCAAGATTGTGCCGCAACAGATGATCAAATCCAGGTCCCAGTTCCTAAAG ATTGCAACTTTGAGCGTAGTTTTTTGTGGGTCGGTGGTTGGTGGTAACATCTCCCTCAGGTACCTGGCGGTTTCGTTTAA CCAAGCGGTGGGGGCGACCACGCCGTTTTTTACGGCGGTTTTTGCTTATATGGCTACGCTTAAGAGGGAGGCTTGGGTTA CCTATGGTGCTCTTGTTCCTGTTGTTGCTGGGGTTGTGATTGCAAGTGGGGGTGAACCAGGCTTTCACTTGTTTGGATTC CTTATGTGCCTTAGTGCAACCGCTGCAAGAGCATTCAAGTCTGTTCTTCAAGGCATTTTACTTTCTTCTGAAGGGGAAAA GTTGAACTCCATGAATTTGCTCCTGTATATGTCTCCAATTGCGGTCCTAGTTTTGTTACCTGCAGCGCTTATCATGGAGC CTACTGTTGTAGATGTCACATTGACGCTTGCAAAAGACCATAAATCCATGTGGATACTTCTTTTGCTGAACTCAGTCACA GCATATGCAGCAAACTTAACCAACTTCTTGGTGACTAAACATACAAGTGCTCTCACACTCCAGGTATTAGGCAATGCAAA GGGTGCTGTAGCTGTTGTTATCTCAATACTCATATTCAGAAACCCAGTCACTTTTGTTGGTATGGCTGGCTACACAGTTA CCGTGTTGGGAGTTGCTGCATATGGAGAAACTAAAAGGAGGTTTAGATGA
Protein sequence (LotjaGi1g1v0670400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVTQGSKESLFICFLVTLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVLSYVSIVFFKIVPQQMIKSRSQFLK IATLSVVFCGSVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYMATLKREAWVTYGALVPVVAGVVIASGGEPGFHLFGF LMCLSATAARAFKSVLQGILLSSEGEKLNSMNLLLYMSPIAVLVLLPAALIMEPTVVDVTLTLAKDHKSMWILLLLNSVT AYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVTFVGMAGYTVTVLGVAAYGETKRRFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 6 | 308 | 303 | 4.6E-182 | – | |
| PANTHER | 6 | 308 | 303 | 4.6E-182 | – | |
| Phobius | 9 | 29 | 21 | - | – | |
| TMHMM | 9 | 28 | 20 | - | – | |
| Pfam | 12 | 301 | 290 | 2.6E-46 | ||
| Phobius | 30 | 40 | 11 | - | – | |
| Phobius | 41 | 66 | 26 | - | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 67 | 77 | 11 | - | – | |
| Phobius | 78 | 99 | 22 | - | – | |
| TMHMM | 78 | 97 | 20 | - | – | |
| Phobius | 100 | 104 | 5 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 105 | 125 | 21 | - | – | |
| Phobius | 126 | 131 | 6 | - | – | |
| TMHMM | 131 | 150 | 20 | - | – | |
| Phobius | 132 | 149 | 18 | - | – | |
| Phobius | 150 | 154 | 5 | - | – | |
| Phobius | 155 | 172 | 18 | - | – | |
| TMHMM | 155 | 172 | 18 | - | – | |
| Phobius | 173 | 192 | 20 | - | – | |
| Phobius | 193 | 211 | 19 | - | – | |
| TMHMM | 193 | 215 | 23 | - | – | |
| SUPERFAMILY | 198 | 300 | 103 | 2.09E-6 | – | |
| Phobius | 212 | 230 | 19 | - | – | |
| TMHMM | 230 | 252 | 23 | - | – | |
| Phobius | 231 | 251 | 21 | - | – | |
| Phobius | 252 | 257 | 6 | - | – | |
| TMHMM | 257 | 279 | 23 | - | – | |
| Phobius | 258 | 279 | 22 | - | – | |
| Phobius | 280 | 284 | 5 | - | – | |
| TMHMM | 283 | 302 | 20 | - | – | |
| Phobius | 285 | 302 | 18 | - | – | |
| Phobius | 303 | 309 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0670400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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