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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0671700 |
| Transcript ID | LotjaGi1g1v0671700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | phospholipase-like protein (PEARLI 4) family protein; TAIR: AT2G20960.3 phospholipase-like protein (PEARLI 4) family protein; Swiss-Prot: sp|Q9M2I0|MCC25_ARATH MATH domain and coiled-coil domain-containing protein At3g58360; TrEMBL-Plants: tr|G7L9N1|G7L9N1_MEDTR Plant phospholipase-like protein; Found in the gene: LotjaGi1g1v0671700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:123575011..123577738) extracted from Lotus japonicus Gifu genome v1.2.
CACACACTGTATGTATGTGTGTAATGGATAAATAGAATCTTTTGATCACACTCATGTTCCTTCTGAAGACACACCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTTCTCTGATACACAAGCCTTTCTTCTTCTTCTTCTT CTGTAGCTACATTCTTGCCCTTGTTTTGTTTGTCCATCCTCTGTAGACTAAAGTAAGGGCACTACAATGCTGCCACCAAG GAGAAAGAGAACAGTGAACCAAAGGCATAGAAAGGAAGAAGAAACACCAAACAATAAAGGGAAGAAGAAGAGGAAGCAGG TGATTGCTGCTTCCTCCTCTGGCAAACAGGTAACCCATGCTGCCATCCACTCTTTCTTGTTCATGAACTCTGTTAACACT ACCATGATTTTGATTCTAGCATGCAAGAACTATGTGAATAGTGAATACCATGATTTTTCCTTTTTAAAGAATGAACATTG CTTAAAGGAGATACCTTTATGAAATTGGAGTTAAAAAGATATGAACTTGGATGGAAAATCATAGTGTCTATCTACCTGTC ATTTTTACCCTTCTATCTCACATTCAAATGTTGATGTTGGGAGAGAGCTTTCATAGCAGGGTCCAGAAATCAAAGGTTTC TTTCTGTCATATATTGTTCAAGTTCATGATTGTGCTAGCTAGCAAGTTTTAAGATTTTCTAATTGAATTAGATAAATTGA AAGGAATCATTTTTGCCATACCCTTGATATTCTTCCTGTATTGTGTTAGGGATTGATTAGATACAAGTTTGACTACCATA GATTTTTTCCCCTACATACCACTACTACTAGTGTTAAGAAGAAACTTTTTTTTCCTCACTTGTTGGCATCAATCAAAATG CTGCTGAACTTATTAAACCTTTCATCTTGCTCTCTTTAGAAATTTGGAAATGAAAAAGAGTGCAATGATCTGAAAAGGAA TTTTGCTTTCTTCAGTAGGATTCTGCATTTTGTTTATATCTAAGGTGCATCTTGTTCATGTATGATGTTGTTCAGTCAGA GTCTTGGGAGTGCCCTGGCTTTGCTGGAAAGCGTTTGAATTCCAATAAGATCACTGGTCGTGCCCGTGCCACCTTGAGAT CCTCGAAGAAGCTTACAGAAACTGGAAAAACATCTGTTTCAAAATGTCCACAGCCTCCAATATCAATTTGTTCTGCCATC CAACAGCCTGATGATCCAGTTGACACTGTATGAATTAAATTAAATGCACTTCTTCTGTGTGTATTTCTGATAATATTGCT CTTTTCCTTTTTGAGTGCATTTCCGCGACAATTTCTCACAATCTATGATTTATACTGATTAAAGAGCGCAGATATAAATG GAATCATTAACTTTACTTTTATGAAATTTGGGCCAGGCTATTCAAGGAGTTCAAGTAGGTTCTGTTGTACAGGATGCTCA TGAGGCTGAGGACATTATTGAAAAGGTGGTTCCTTTGGCAAAGGTTCCTGTTGTAGAGGAAGCAGCACATGAGGCTGAAG ACATTCTTGAAAAGGTGGTTCCTTTGGAAAAGGTTCCTGTTGTAGAGGAAGCACATGAGGCTGAAGGCAATCTTGAGAAG GTTCCTTTGGCAAAGGACACTCATCGGTCTCCATCGCCATCTTCCAGCGGCAACCTAAATCTAACTGAAATTGTTAAGAT GAGGGATGAATTTGATGAAGATGATGAAGTTAATTCTGTTGGACAGAGCTCACCTATGGACACAGTTCTAGGATACCAAG TGAAGCTCAGTTCCATGCCAATGTTAAGAAAAATTCTCGACAAGCATGGAGATATTGCTGAGAATTGTTCGATATTGACA ATGAAATACCGTTCAAAGTTGTTGGAGATGATATGTGACATTGTCTCAGAATTGCAGGAAAAAGACTTTTGGAAAATCAA AGATAATGACCTGAAAAACATGTTTGCTATTGTAGATGAAGTTAAAAGCTTGAAGGTAGACATTGAGTGGCTTCAGCTGA GACTGGTAGAGATACGTGAGGCAAGACATACTCTTAAACAGGTTAAAGATAGCAATAGAAGAACCATTGATGCTGCTGAA AGAGAACTGGGAGAATTTGAAGCACAGAAGAAGGAAATTGAAGCAAAGCTTCATTCACTATGTGGTCAAGAGACTAGTTA CAAGGACACTCTGGCAAGAGCAAAGAACGAGTCTATCAGGATAAATGCAACAATCAAAGATGCCAGATCTAAAGTCACAC AGTTTCATAATTGCTCATTGGTGGATGATTTGCTTTAGTTTTGCTATTTCATCTCCCTTTCCCCCTTTTACATAGTAGCA GTGGCGGAGCTTGAGCTGAAATTTTGGATGGGGAAAATTTAGAATGTGGTGGAGCTGGAAAGGTCTCATTCCCAGTCGTC AAGTTGGAAATTTTGGGGCTGTTAGGCAGTTGGAAATCGGCGACATGTATCAAGAGTGTCGGGGCAGGGTATCTGCAGTT GCTATTCCAGCCTTTTCTTGCATGGCAGAATGCATGTTTGTATTATTTATTCATGGAAGATCTCTGTGCTTTTGTACTGT GTCTGGAAGAAATTTTAATATTTAGCATTCCGTACAATCTATATAATTAAGCTTCTGACATCTTTTCCATTTTTAAGGTT GGGAGTCTGAATCCTAGTAATGCCACAAATGCTTCATTTTGTTAATTTCATCATGGTCTTATATTATGAATCTCTGATCT GATGCCTG
CDS sequence (LotjaGi1g1v0671700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGCCACCAAGGAGAAAGAGAACAGTGAACCAAAGGCATAGAAAGGAAGAAGAAACACCAAACAATAAAGGGAAGAA GAAGAGGAAGCAGGTGATTGCTGCTTCCTCCTCTGGCAAACAGTCAGAGTCTTGGGAGTGCCCTGGCTTTGCTGGAAAGC GTTTGAATTCCAATAAGATCACTGGTCGTGCCCGTGCCACCTTGAGATCCTCGAAGAAGCTTACAGAAACTGGAAAAACA TCTGTTTCAAAATGTCCACAGCCTCCAATATCAATTTGTTCTGCCATCCAACAGCCTGATGATCCAGTTGACACTGCTAT TCAAGGAGTTCAAGTAGGTTCTGTTGTACAGGATGCTCATGAGGCTGAGGACATTATTGAAAAGGTGGTTCCTTTGGCAA AGGTTCCTGTTGTAGAGGAAGCAGCACATGAGGCTGAAGACATTCTTGAAAAGGTGGTTCCTTTGGAAAAGGTTCCTGTT GTAGAGGAAGCACATGAGGCTGAAGGCAATCTTGAGAAGGTTCCTTTGGCAAAGGACACTCATCGGTCTCCATCGCCATC TTCCAGCGGCAACCTAAATCTAACTGAAATTGTTAAGATGAGGGATGAATTTGATGAAGATGATGAAGTTAATTCTGTTG GACAGAGCTCACCTATGGACACAGTTCTAGGATACCAAGTGAAGCTCAGTTCCATGCCAATGTTAAGAAAAATTCTCGAC AAGCATGGAGATATTGCTGAGAATTGTTCGATATTGACAATGAAATACCGTTCAAAGTTGTTGGAGATGATATGTGACAT TGTCTCAGAATTGCAGGAAAAAGACTTTTGGAAAATCAAAGATAATGACCTGAAAAACATGTTTGCTATTGTAGATGAAG TTAAAAGCTTGAAGGTAGACATTGAGTGGCTTCAGCTGAGACTGGTAGAGATACGTGAGGCAAGACATACTCTTAAACAG GTTAAAGATAGCAATAGAAGAACCATTGATGCTGCTGAAAGAGAACTGGGAGAATTTGAAGCACAGAAGAAGGAAATTGA AGCAAAGCTTCATTCACTATGTGGTCAAGAGACTAGTTACAAGGACACTCTGGCAAGAGCAAAGAACGAGTCTATCAGGA TAAATGCAACAATCAAAGATGCCAGATCTAAAGTCACACAGTTTCATAATTGCTCATTGGTGGATGATTTGCTTTAG
Protein sequence (LotjaGi1g1v0671700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPPRRKRTVNQRHRKEEETPNNKGKKKRKQVIAASSSGKQSESWECPGFAGKRLNSNKITGRARATLRSSKKLTETGKT SVSKCPQPPISICSAIQQPDDPVDTAIQGVQVGSVVQDAHEAEDIIEKVVPLAKVPVVEEAAHEAEDILEKVVPLEKVPV VEEAHEAEGNLEKVPLAKDTHRSPSPSSSGNLNLTEIVKMRDEFDEDDEVNSVGQSSPMDTVLGYQVKLSSMPMLRKILD KHGDIAENCSILTMKYRSKLLEMICDIVSELQEKDFWKIKDNDLKNMFAIVDEVKSLKVDIEWLQLRLVEIREARHTLKQ VKDSNRRTIDAAERELGEFEAQKKEIEAKLHSLCGQETSYKDTLARAKNESIRINATIKDARSKVTQFHNCSLVDDLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 53 | 53 | - | – | |
| MobiDBLite | 12 | 26 | 15 | - | – | |
| PANTHER | 12 | 398 | 387 | 2.2E-58 | – | |
| MobiDBLite | 166 | 194 | 29 | - | – | |
| Pfam | 186 | 394 | 209 | 9.1E-26 | ||
| Coils | 322 | 349 | 28 | - | – | |
| Coils | 364 | 384 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0671700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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