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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0675500 |
| Transcript ID | LotjaGi1g1v0675500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutaredoxin family protein, putative; TAIR: AT5G03870.1 Glutaredoxin family protein; Swiss-Prot: sp|Q9FLE8|Y5986_ARATH Uncharacterized protein At5g39865; TrEMBL-Plants: tr|A0A0B2P3J5|A0A0B2P3J5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0675500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:124265891..124267964) extracted from Lotus japonicus Gifu genome v1.2.
GGCTAAATATTTTTGCTTTTTTCTCTTTGGACTACATACAAAGCCCGTTACTAAAGTCTTGTTTTATGAACCTTGCCTTT CTATCCTGACCCAAGAAACGGCCCAAAATAAGTGCGAGGGGATTCGAATTTTCCGACCGTTGAGGCCCGTTTCAGACATG GTAACGGTTGGAAAAAACTTCCAATAGCCGTTGCGTTGGCACAACCTTAAAACTAACAAAACATGTCATTCTAGAATCTA GACAGAGACAGAGAGAGAGGGAGAGAGTCAAAACTTCCACTCATCACCATCTATGGGCTGCGTCTCCTCTAAACTCATCA GGAAAGACATCAAGCAAGAGCATGTCATCATCGACAATTGCGGTGGCGGCGGCCGTTACTTAAGCCATGTGGTTTCTCTA ACTTCCTCTACCTATGGAGCACTCAAGTTGGACAAGGACAATGACCAACCAGTCATTGCTGCAAAGCCACGCGAAGAACC AGAAGCTATCACCACCATCAACGCTTGGGAACTCATGGAGGGTCTTGAAGATGGAGTGCCCATTTCAAATCAGCCTAAGA AAAGTCCAAAGTCTTCTTCACCTTTTCTTCGTGGGTTCATGAACTCAGACACCAGGAGCCCCTTGAAGTTCTTGAATCAA CTGGGGTCCCCCAAGACCGTGAAGAAGTCCACTGGGAAGGAGAACAAGGTTCAAGTCAATGGAGTCAGAACTGGTGGTGT GAGACGCTTGGATTATAGTAATAGTCCCAAGGGAATTCTCAAACCAAGCAATTTGTCACCCAATGCAAGTAAGAATTCGG GTATTCCAGCGAAAGGGTCTCCGATTTGTGCCAGAAGAAAGAGTTTTGGTGGGAATGAGAAAGACACTCTGCAATGTTCC TCGCGGAGGAAGAGTCAGAGTCCTCTGTTTGATCCAGAGCTTGTTGCATCATATGAAAAGGAACTCTCTGAAGAGGAAGA ACAGGTCAAGAGAATGGTTTGGGCTACTCCAAAAACCAGAAGAGCAAGGAAATCGCTGGATTCACTGTCCTTAATTCAGA TGTTTGAGAAAAAATGTCCACCGGGAGGGGAAAATTCTGTGGTGATTTACACTACAACTTTGCGAGGAATCAGGAAGACT TTCGAGGATTGCAACAAAGTGAGGGCAATCATTGAATCTTACTGTGTGCAAATGCGTGAGCGTGATGTGTCAATGGATTC AGGGTTTAAGGAGGAGTTGAGGAAGCTGATGGGGGCGGAGCAAGTGAAAGTTCCGGTTGTTTTTGTGAAGGGAAGGTTGG TTGGAGGAGTTGATGAAGTTGTGAAGTTGGAAGATGAAGAGAAATTGGGGGTTCTGTTGGAGGGGATTCCAAAGGCAGTG GGTGGGTGTGAAGGTTGTGGTGGTGTGAGGTTTGTGATGTGTGTGGAATGTAATGGAAGTTGCAAGGTTTTGGATGAGGA TAAGAAGAAGACAGTCAAGTGTGGGAAGTGTAATGAGAATGGAATCATGCAATGTCCTATCTGTTGTTGAGGTTTGTGTG TGTTGGTTTGGATTTGATTTTGGGGTGGTTTCTGTTCTTAATTTGTAGGACGAGACAGAAAAAGCATGGTGTTTGATGTT TATTTCTAGCTAGGGGTAGGGTTCTAAAGCTTGTTTTAGTTCCCTTTATGTTGTTGATTCTTTTACTCTCTTGCATTTGG GACACTAGTTGTTGTTCCTCCACTAATCTAATTTAATTTTACACGCATGGATTGGATTCTTTTACTCTCTTTCCATTCAG TCAGTCCAAAGAAAATTTTCTCGTAGGAAATCTTTAGCATAATATTGGCTTTTGCAAATTGGAATGTGCATATTTTCACC TTAATTTGTTGCCGGTGGAGGTTGATCTAGGAGATGTGGTGTAAGAAAGAAACTGATCAAATTATGATTCACATACATGA TACATGAGGCTGCTGTGAGTGCTGCTTTGAATTCTCTTTGGTGCTTGCTTTGAAGGAAGTATAGAGAATTTGAAATGGTT ATTACATCATCAAGAATTCAGATCTCTTTCCACAGCTTAGAAGAGAACCGTCAACACAATCTTTGGGAGAGGCA
CDS sequence (LotjaGi1g1v0675500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTGCGTCTCCTCTAAACTCATCAGGAAAGACATCAAGCAAGAGCATGTCATCATCGACAATTGCGGTGGCGGCGG CCGTTACTTAAGCCATGTGGTTTCTCTAACTTCCTCTACCTATGGAGCACTCAAGTTGGACAAGGACAATGACCAACCAG TCATTGCTGCAAAGCCACGCGAAGAACCAGAAGCTATCACCACCATCAACGCTTGGGAACTCATGGAGGGTCTTGAAGAT GGAGTGCCCATTTCAAATCAGCCTAAGAAAAGTCCAAAGTCTTCTTCACCTTTTCTTCGTGGGTTCATGAACTCAGACAC CAGGAGCCCCTTGAAGTTCTTGAATCAACTGGGGTCCCCCAAGACCGTGAAGAAGTCCACTGGGAAGGAGAACAAGGTTC AAGTCAATGGAGTCAGAACTGGTGGTGTGAGACGCTTGGATTATAGTAATAGTCCCAAGGGAATTCTCAAACCAAGCAAT TTGTCACCCAATGCAAGTAAGAATTCGGGTATTCCAGCGAAAGGGTCTCCGATTTGTGCCAGAAGAAAGAGTTTTGGTGG GAATGAGAAAGACACTCTGCAATGTTCCTCGCGGAGGAAGAGTCAGAGTCCTCTGTTTGATCCAGAGCTTGTTGCATCAT ATGAAAAGGAACTCTCTGAAGAGGAAGAACAGGTCAAGAGAATGGTTTGGGCTACTCCAAAAACCAGAAGAGCAAGGAAA TCGCTGGATTCACTGTCCTTAATTCAGATGTTTGAGAAAAAATGTCCACCGGGAGGGGAAAATTCTGTGGTGATTTACAC TACAACTTTGCGAGGAATCAGGAAGACTTTCGAGGATTGCAACAAAGTGAGGGCAATCATTGAATCTTACTGTGTGCAAA TGCGTGAGCGTGATGTGTCAATGGATTCAGGGTTTAAGGAGGAGTTGAGGAAGCTGATGGGGGCGGAGCAAGTGAAAGTT CCGGTTGTTTTTGTGAAGGGAAGGTTGGTTGGAGGAGTTGATGAAGTTGTGAAGTTGGAAGATGAAGAGAAATTGGGGGT TCTGTTGGAGGGGATTCCAAAGGCAGTGGGTGGGTGTGAAGGTTGTGGTGGTGTGAGGTTTGTGATGTGTGTGGAATGTA ATGGAAGTTGCAAGGTTTTGGATGAGGATAAGAAGAAGACAGTCAAGTGTGGGAAGTGTAATGAGAATGGAATCATGCAA TGTCCTATCTGTTGTTGA
Protein sequence (LotjaGi1g1v0675500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCVSSKLIRKDIKQEHVIIDNCGGGGRYLSHVVSLTSSTYGALKLDKDNDQPVIAAKPREEPEAITTINAWELMEGLED GVPISNQPKKSPKSSSPFLRGFMNSDTRSPLKFLNQLGSPKTVKKSTGKENKVQVNGVRTGGVRRLDYSNSPKGILKPSN LSPNASKNSGIPAKGSPICARRKSFGGNEKDTLQCSSRRKSQSPLFDPELVASYEKELSEEEEQVKRMVWATPKTRRARK SLDSLSLIQMFEKKCPPGGENSVVIYTTTLRGIRKTFEDCNKVRAIIESYCVQMRERDVSMDSGFKEELRKLMGAEQVKV PVVFVKGRLVGGVDEVVKLEDEEKLGVLLEGIPKAVGGCEGCGGVRFVMCVECNGSCKVLDEDKKKTVKCGKCNENGIMQ CPICC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 405 | 405 | 4.0E-162 | – | |
| PANTHER | 1 | 405 | 405 | 4.0E-162 | – | |
| MobiDBLite | 81 | 201 | 121 | - | – | |
| MobiDBLite | 87 | 134 | 48 | - | – | |
| MobiDBLite | 153 | 171 | 19 | - | – | |
| Coils | 211 | 231 | 21 | - | – | |
| ProSiteProfiles | 251 | 356 | 106 | 18.119 | ||
| SUPERFAMILY | 256 | 350 | 95 | 1.24E-21 | ||
| Gene3D | 259 | 353 | 95 | 4.3E-17 | ||
| CDD | 262 | 401 | 140 | 3.26586E-56 | – | |
| Pfam | 263 | 330 | 68 | 1.5E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
| Molecular function | Protein disulfide oxidoreductase activity | Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds. | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi1g1v0675500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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