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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0682800 |
| Transcript ID | LotjaGi1g1v0682800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cactin; TAIR: AT1G03910.1 cactus-binding carboxy-terminal, cactin; Swiss-Prot: sp|F4I2J8|CATIN_ARATH Cactin; TrEMBL-Plants: tr|I1NAG1|I1NAG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0682800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125008337..125015849) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAAAAAAAAAATTTATCGTGAAAAAAATATATATTTTCCTAATATTTTTTTTTGAAAGAAACTAAAATTTTAAATTT AACGTTTATTGCATTGAATCAATCGTAATATTTAGGATTTCTCAATTTCTCAACTAAGAAACCATATTCCCAATTTTCCA TCCCCAAACCCTGCGAATTTTCGAACAACATCGCTCAAGAGTGAAGACTCTCCGGCGGTCGCCATTGCAGCACCTGCGTT CCTGACCGAAGCGCCTTCTCCTCCGCGTCGCCGGCAGATTGTCACCGCCGGTAAGTTTATTGAGTTGTTAGCTTGAGCTA CTATGATGTAATTGTGTTTGGGTGTCCATATATAATTCCAAGTGAGATTTTGTTCTGTTTTAGTTTGATTTACAGTAGAT TGATGGGTTTTGATGTGGTTTAGCTGAGTAGTTTCGAGAGATTGGAAGAAACCCTAGAAAACTTTCATGATCAAAATCTG ATTTCTGAGTTTTTTTTTTTTGTAAAGACCCGATTATCCGAACCGACAAAGCAGTAGTTTTTTTCGTTTGGTTATAGTTA TAGTAGTATATAATGTATTTCTATCCTAGATTACAGAGGTTTTGAAATACCAATGCGACAAAGCCTTCCTTGAATTTCCT TCTGAATCTGAAATTTTTTATTCCTTTCGTAGTGTAAGGTTTACGATGGAAGGGGATTCTAATTTCTGTTTTTTTAATAG AGATACGATGGGTGGCAGTAGTAGAAAAGGTAAAAAACGAAGAGCAGATGACTCTGACACCGACTCCTCTGACTCTGACA ACCACCGTAGAAGTAGTCGGTCACGGCGGGACGCAGATGATGCCAGTAGGAAGAAGAAGTCATCGAGGGATGTCACGGAA GAAGAAATAACACAGTACTTGTCCAAAAAGGCCCAGAAAAAGGTTTCAACTTGCTTCTACATCCCTTATTTCATGATTTG ATTTGGTTTCATGTTTAGAATTTTTATTCACTTGTTCTTTATTTATGTCCAGGCAATGAAAGTCGCTAAAAAAATCAAGA CCACTACGGTGTCGGGTTACTCCAATGACTCAAATCCATTTGGTGACTCTAATCTCAATGAGAAGTAGGTTTAATCCTCC CTATATTTTTTTTCTCATTACTTTTCCTGTTTCATCATTAAATTAAACTTGTTTCAGATCCTTCACTATAAGAATAATAA AGGATCTGTAGGTTTGAAATAATCGCCCAGATGCAAATTATATGTAATTGATACACCGACATTATGATCTGTAGGTTTGT TTGGCGCAAGAAGATTGAGCGTGATGTTTCTCAAGGTGTGCCTCTTGATGCGTTTTCTATGAAAGCAGAGAAAGAGAGAC AAAGAGATAGGATGGTATGCGTATGCATTTACTGTGTGCATTTTATTTATCGGTATAAGTTTAGGCTTATATTAAATTTA AGAGATTCTAATTGGAATAGTTAATGCTTTTCTTTTTTATTCGAGCTAGGCATATAATAATTTATTTCTCAGATAAGCAG GAGTAGATAGCAATATAAACACTAGGCCCTTGCGTGTGAACACTATGATGAACTTCTACTGTTCCTGGTGGTTGTTCCAG AGGATGGAGTAGGTTTAGTGTAGTAGCCTTTAGTGGGGCCGAACTTGCATAATCTGGTAGTTGAAGTGCTGCACTAAATT TAAGAGATTGATTGTTCCATAGGAATATCAGCTTCATCATATAACCTTCTATCATTAGGAATATGCTTAGCTTCTTAAAC GTTCCTCCTAAACATCATAGGGAAGGGTTTGATGATGGTTACATCTCTGCTGTAATTTATATTAAATCATTACAACGGTC ACTGAAAAGATGTTTCTAAGAAGAATTTGGCGTGTGATATTATATGATTCGGTCTTTCTTTTGAAGGAAATCAGAGTTAT GGCCTGAAGATATACCGAAAAGATATATCCACTTCAAAGGATAGGATTTATAGAGTTCTTATTTTGATGGCTAACCATTG GTCTTCAATATTTATATCTTGATGATATTGCTCTCCTCTTGGTAAAATTCATTTTAAGTATAAGCTTCTCTAAATAAATA ATGTGTCTAGCAGGCTGTCCTAACTTTTCCTTTGAATAACTGAGGGATCTTAATATCTTCTCAAATAGATGGGCTTGAGG ATGAATATTTTATAGAATTATTTCTTAAAATTTATTCACAGAATAAACATATAAAAACATGTCTGATGAATTCTATTTTG AGAGTAAGTTTTAGAAGCTTGAGGATGCTCCGGCAGGCATGGTGGAGGTGGTGGTTATAGTGATTTGAAGTTGAGCAGAG AATGCACAAAAACAAATTAAAGAAATAAAAGTAATTAGAATGTATTTTTCTAATAACAGATTATGAAGTACAAGTTTTCA GAACAATAGGAAATTAGGTAATTAGAATGTATTTCCCTATTTTATTTGAGCTGCTTCTTCCATTTCTATGGTACTTGCTG GGCACTTTATCTTTACTGTCCGGACTTAACTTACTACGTTTCTTGCCTCTGGTTAGTCTGTTGTGCACAATGGACAGTCT TCTTAGATACGATTTTCATTGCTCATTTATATTATCAAGAACTACCCTGTAAATGATAAAAATAATCTGTCCTCATACTT CTTAAAAATGTTTATAAGTTGTACTGGGTGAAATCTGACATACATTAGAGTTAAATTAATCTGACGTCTTTGTTTTTACC TGGAGAGCTTATTCCTGATTTATTATTATTTATTGAGGATGGTTGAAAATATGGTTCTGTTGAGTTTTGTTAAACTGTAA GGGTTTATACTAATTCAGCAATGCATAATGCTTATTTAAGTGAACTTCTGTTGGAATCTAGGCTTTTCATGTTTGTTCTG TGTTCTCGCAAGTTTGATCCTGCGATTTGTTAATGATGACCAAAAAGCTAGACATTCCCACTGCTTACCTTTTCAATATT CACCATCATAATACAGGCGGAAATTGAAAAAGTGAAAAAGAGAAGAGAAGAAAGGGCACTTGAGAAAGCACAACATGAGG AAGAAATGGTAAGTCCTTTCATGTAAATTTTTATAGTCCATAGCTATTGCGATAATATTAGTTATATTGTATTAGTAATT TTCATTAGTTTAGGCTTTGTACTTGGGGTACTATTTTATACATGACATAATATTAGTGTAAGTAGGAGTGTACACCAGTG TCTGGTATTATTAAGCCTTACTAGTTAAATATGTTCTCTGGTGTCTCCTTTACATCTAATGCTTTAATTCTGATATTTAT CATTTTAATCCGTTGGAGGAATTTTTTTTACCTAGCCACTGTAAAATTGTGGCTTTTTTCTAATATGGCATACCAATGAC TCCCCTTGTATCAGTATTCACTATTTAGTACTGTCTTTTAAGAGGGCTCCTAGAATTTCAATTCACTCAGGATTTTGTGC CCCACATATAATGGGGATACATAAGAGTAAGCCAAGGCTTGATATAGGTGTTAGATTTTTGATAGCAAAAACTTTGTTAT CTTTTTTGGGATTTGACACATTCTTTCTACCAGGCATTGCTAGCCAGAGAACGTGCTCGAGCTGAGTTCCAAGACTGGGA GAAAAAGGAAGAGGAGGTACTGGCCTTGAGTTCCTTTTCATTTGTTGTTATTTAATATAATATAATATAATACTGTCAGT CTGATGACTTTGACAATTTAATTTGCAGTTTCATTTTGATCAAAGCAAAGTTAGGTCAGAGATTAGATTGCGTGAAGGGC GTGCGAGGCCAATCGATGTCCTAACCAAGCACCTCAATGGCTCTGATGATTTGGATATAGAAATCAATGAACCATATATG GTCTTCAAGGTAAGTACTTGACTTTTTTTTGTTCTTTTCATTTTATTCCTCTTATCTCTTCAACTATTGTACACATGCTC TGATTACAGATTTCCAGCTTTAAATGATAATATTATTGGACAAATTACATATTGATTTGATACTTGCTTGCTGCAGGGTT TGACTGTGAAAGAAATGAATGAGCTTCGTGATGACATCAAAATGCATCTGGATCTTGACAGGGCAACACCGACCCATGTA AAATATTGGGAGGTATTATCCTGTTTACATTGTCTGGTTTTTGCTTTGTATTAATGTTCAGATTACTTGATCAATATCTT AAACCTCACAAGTCACAACTACACATTCATGATAATTTCAACATGAAATTTGAAGTAAACTGGAGCCTAGTAAACTAACT GAGTTTCGTGATCTTGTCCTTCTCTTGTATTATTTAACTCATATTGTCCTTTTGGTTGGTGGCTTCTTCAAAGCTAAAGA CTTACTGTTCAATGTCTTCATGCAGGCTCTCCTTGTGGTGTGTGATTGGGAGCTAGGTGAAGCTCGAAAAAAAGATGCAC TTGATCGAGCTAAGGTGCGTGGTGAAGAACCTCCTGCTGAGCTGCTTGCTGAAGAAAGGGGTCTGCATTCCAGTGTTGAG CCAGATGTGAAGAGGCTTTTGCAGGGGAAGACACTTGCAGAGTTGGAGGCCTTACAGCTTCATATTGAGTCAGAGATGCG TACTGGTACAGCAAAGGTGGTTGAGTACTGGGAAGCCATTTTAAAATATCTCGACATATACAAGGCCAAGGTATTCTCCA TCACATTCTTCTCATGTATGTCGGTTACATTCCTTTAAACAATGGTTGTTTGACTGTATTGTTAAATTTCTGAAATACAG GCTTGTTTAAAAGAAATTCATGCTAAAATGTTGCGTAAGCATTTGGAACGCCTTGAGCAGCCATCAGAGGATGAAGATAA GTTGGAGAATGCTCTTGTTCCAATACCTGAGGAGGGAGATGCTGAGGATGATGTTGAAGGTATAAATTTTGTTGTTGTGG TTTAGTTGTCCATGAAGCAAGTTTTTACTGGCTCAAATTTCATGTTGAACTTTGCTTGATATTTCTTTTTCTTGGTAGTC CGATCTGCAGATGAATCGTTTTCACCAGAGCCCATTAGAGAGAATCAAGAAGCTGAAGATGAGGCTGGATCATTTTCACC CGAACTGTTGCATGGTGATGATAATGAAGAAGCTATTGACCCTGAAGAGGACAGGGCTATACTGGTACTCTTTTTAAGCA TGATTATTAATAGTGAACTCACACTGAAGTTACAAGTATATAGATTATTACTAGTATTTTAGACCGTGCAGTAAAAATAA TTTTTAAAGAAACTTAAGTATATTATAAGAAGTTTAAATAATTAAAAAGGAATTCAAATTTTGTAGAGCACTCTAAGTTA TATTATAGAGTTGATAGCATACCTATGTTGGCACATTTATAGGAGCGGAAACGTTTGGTTGTACTAGAAGAGCAGCAAAG ACGAATTCGGGAAACAATGGCATCAAAACCAGCTCCATCTGAAGATCATTTTGAGATGAAGGCTATAAAAGCTATGGGAG CTATGGAAGATGGAGATGCAGTGTTTGGATCTGGTGCTGAAGTTAACCTCGATTCACAGGTATCATGTCTTGCACACATA TATAGCTTATCACTCTTTGTGGAATAGCATCAGCATGTTGCTCTCCATGATTCTTACAATGTTGAATTTTTCATGGATAG ATAAATACAGTGTTAGGATCTAATTATTAGGGATTTAGATTTATTTTATTTTTATCTTTTCAGTTTTATAGTCTATCTTA GGAGATCTTTTATATTAGGAGGTTATCTTTTATTTTGGTTAGTTTATCTTCTTTATTTCTTAGGGGTTAAGTTTATCTTC TTAGGATTAATTTATTATACCTTCCTTAGGTTAGAGTCGTGGATTAAATTATTGAGTTGTGTGACTTGCCCTAGGAGTTA AGCTTCTTATTTATCCTTTTTTTATTTTTATCTTAATAAAACTGAAAAAATTAAAAATAAAATAAATCCCTAAGAATTAG ATCCTAACATATAGCATGAATGTTCTGGATTTTTGGAAGTACTAAGTTGTGGATGGATCATAGAAGAGAGTTTTATCAGA GCTGTTTAAATGTTGTCTTATTGTATCATTTGGTTACTTCTCTTCACTTTTAAAGTTGACACTAAAGGTAGTGAATACAC TTGGTATAATTTGGTAGTTTAAGGAGTAATAAAAATTGGTTATCTATATTCTCCTCATCTTTTAAAGTTCCTGATGTGAT TCATAAATGTTGGAGCAGGTCTATTGGTGGCATGACAAATACAGGCCTAGGAAGCCGAAGTACTTCAACCGTGTTCACAC TGGATATGAGTGGAACAAATATAATCAGACTCACTATGACCATGACAACCCACCCCCAAAGATTGTGCAAGGTTACAAAT TCAACATTTTTTATCCTGATCTTGTTGATAAGATAAAAGCCCCAACCTACTCCATTGACAAGGATGGCAGCAATGGAGAG ACTTGCATCATAAGATTCCATGCAGGGCCACCATATGAGGACATAGTAAGTTTGTTGTTTTTGATGTTTTGAGAGATTTT GAATTTCCAATTACTTTACTTATTTTCTTGTGTTTCCATGACAGGCTTTCCGCATTGTTAACAAGGAATGGGAGTATTCT CATAAGAAAGGTTTTAAGTGCACATTTGAACGTGGCATTCTGCACGTCTACTTCAATTTCAAACGCCACCGCTACCGCCG ATAGTTTCATATCAGGCAATGTATGTGCTTATTTGACCATTATAGAAATGTTTGTGCTTATTCAAGTTCAGATCCTTCAG ACGTCTATATGAAAGGAGGTGCAATTGAGCATGGGATATATAGCAGTTCAGCTCCATTCATACTCTTAATTTTCTTTGTC TTGTGAGTTCAATTGTGCTAATCTTAGGGAGCAAATCAAGTTGACAGATTGCACTTAGCTCTACCGGAATTTTACTTGGT AGCTCATAATTAAACTGCAAGTGGATTGAGTAAATTTAGCTTCTCCGAAGTGAAAGTTCAAATTTTGACGGTAGAGTAAA TACCACACTAATTTTTAGTGATTGTAATCATATACTTGCACATATGTAGTAAAGTATGTTTTTAGATCTCAACCATTAGT TTTTTTTTTTTTTTCAGTCAACCTTTTGGGTGACTTATTTTACCCTCTAAACTGAGTCTCTCATTTGGGAAGAAGCATAT TTGGCATAATCAGCAAATTCAGTGCTGCATTACCAACACTAGCTAAGCTTTTTGTGCTGCCATGATTGCGCCTTATCCCA CTGTGAGGAAGCAGTGGAGAAGCTTGAGAAAATTAATGAAAGCATTATCGGATCAAATGACATTACTTTTGACTTGTCCC ACTATTTTAAAGTGATCTCTTTTCTTATTTTACCACCAGTAAATAAGTATCTTGGCTAAAGTAGCTGTTTGTTAAGATTA TGCCATTAGTTGTAATATCATATTATACTAATGAAACTATTCCTTATTTGTACATAATATTCGTGCTATGTTCTCAGCTA TAAAAGAATATTATCCTTAATTTAAAATCATATTTGAATGACAATAGAAGTTTTGTTTTACTTTTTAAAGCAA
CDS sequence (LotjaGi1g1v0682800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGCAGTAGTAGAAAAGGTAAAAAACGAAGAGCAGATGACTCTGACACCGACTCCTCTGACTCTGACAACCACCG TAGAAGTAGTCGGTCACGGCGGGACGCAGATGATGCCAGTAGGAAGAAGAAGTCATCGAGGGATGTCACGGAAGAAGAAA TAACACAGTACTTGTCCAAAAAGGCCCAGAAAAAGGCAATGAAAGTCGCTAAAAAAATCAAGACCACTACGGTGTCGGGT TACTCCAATGACTCAAATCCATTTGGTGACTCTAATCTCAATGAGAAGTTTGTTTGGCGCAAGAAGATTGAGCGTGATGT TTCTCAAGGTGTGCCTCTTGATGCGTTTTCTATGAAAGCAGAGAAAGAGAGACAAAGAGATAGGATGGCGGAAATTGAAA AAGTGAAAAAGAGAAGAGAAGAAAGGGCACTTGAGAAAGCACAACATGAGGAAGAAATGGCATTGCTAGCCAGAGAACGT GCTCGAGCTGAGTTCCAAGACTGGGAGAAAAAGGAAGAGGAGTTTCATTTTGATCAAAGCAAAGTTAGGTCAGAGATTAG ATTGCGTGAAGGGCGTGCGAGGCCAATCGATGTCCTAACCAAGCACCTCAATGGCTCTGATGATTTGGATATAGAAATCA ATGAACCATATATGGTCTTCAAGGGTTTGACTGTGAAAGAAATGAATGAGCTTCGTGATGACATCAAAATGCATCTGGAT CTTGACAGGGCAACACCGACCCATGTAAAATATTGGGAGGCTCTCCTTGTGGTGTGTGATTGGGAGCTAGGTGAAGCTCG AAAAAAAGATGCACTTGATCGAGCTAAGGTGCGTGGTGAAGAACCTCCTGCTGAGCTGCTTGCTGAAGAAAGGGGTCTGC ATTCCAGTGTTGAGCCAGATGTGAAGAGGCTTTTGCAGGGGAAGACACTTGCAGAGTTGGAGGCCTTACAGCTTCATATT GAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAAGCCATTTTAAAATATCTCGACATATACAAGGC CAAGGCTTGTTTAAAAGAAATTCATGCTAAAATGTTGCGTAAGCATTTGGAACGCCTTGAGCAGCCATCAGAGGATGAAG ATAAGTTGGAGAATGCTCTTGTTCCAATACCTGAGGAGGGAGATGCTGAGGATGATGTTGAAGTCCGATCTGCAGATGAA TCGTTTTCACCAGAGCCCATTAGAGAGAATCAAGAAGCTGAAGATGAGGCTGGATCATTTTCACCCGAACTGTTGCATGG TGATGATAATGAAGAAGCTATTGACCCTGAAGAGGACAGGGCTATACTGGAGCGGAAACGTTTGGTTGTACTAGAAGAGC AGCAAAGACGAATTCGGGAAACAATGGCATCAAAACCAGCTCCATCTGAAGATCATTTTGAGATGAAGGCTATAAAAGCT ATGGGAGCTATGGAAGATGGAGATGCAGTGTTTGGATCTGGTGCTGAAGTTAACCTCGATTCACAGGTCTATTGGTGGCA TGACAAATACAGGCCTAGGAAGCCGAAGTACTTCAACCGTGTTCACACTGGATATGAGTGGAACAAATATAATCAGACTC ACTATGACCATGACAACCCACCCCCAAAGATTGTGCAAGGTTACAAATTCAACATTTTTTATCCTGATCTTGTTGATAAG ATAAAAGCCCCAACCTACTCCATTGACAAGGATGGCAGCAATGGAGAGACTTGCATCATAAGATTCCATGCAGGGCCACC ATATGAGGACATAGCTTTCCGCATTGTTAACAAGGAATGGGAGTATTCTCATAAGAAAGGTTTTAAGTGCACATTTGAAC GTGGCATTCTGCACGTCTACTTCAATTTCAAACGCCACCGCTACCGCCGATAG
Protein sequence (LotjaGi1g1v0682800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGSSRKGKKRRADDSDTDSSDSDNHRRSSRSRRDADDASRKKKSSRDVTEEEITQYLSKKAQKKAMKVAKKIKTTTVSG YSNDSNPFGDSNLNEKFVWRKKIERDVSQGVPLDAFSMKAEKERQRDRMAEIEKVKKRREERALEKAQHEEEMALLARER ARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMNELRDDIKMHLD LDRATPTHVKYWEALLVVCDWELGEARKKDALDRAKVRGEEPPAELLAEERGLHSSVEPDVKRLLQGKTLAELEALQLHI ESEMRTGTAKVVEYWEAILKYLDIYKAKACLKEIHAKMLRKHLERLEQPSEDEDKLENALVPIPEEGDAEDDVEVRSADE SFSPEPIRENQEAEDEAGSFSPELLHGDDNEEAIDPEEDRAILERKRLVVLEEQQRRIRETMASKPAPSEDHFEMKAIKA MGAMEDGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDK IKAPTYSIDKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 92 | 92 | - | – | |
| PANTHER | 7 | 630 | 624 | 0.0 | – | |
| PANTHER | 7 | 630 | 624 | 0.0 | – | |
| MobiDBLite | 7 | 59 | 53 | - | – | |
| MobiDBLite | 75 | 92 | 18 | - | – | |
| Coils | 122 | 166 | 45 | - | – | |
| Pfam | 158 | 355 | 198 | 2.8E-57 | ||
| MobiDBLite | 367 | 433 | 67 | - | – | |
| MobiDBLite | 367 | 381 | 15 | - | – | |
| MobiDBLite | 396 | 429 | 34 | - | – | |
| SMART | 506 | 630 | 125 | 3.8E-83 | – | |
| Pfam | 506 | 630 | 125 | 5.6E-61 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0682800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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