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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0686900 |
| Transcript ID | LotjaGi1g1v0686900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ACT domain-containing family protein; TAIR: AT2G36840.1 ACT-like superfamily protein; Swiss-Prot: sp|Q9SJM1|ACR10_ARATH ACT domain-containing protein ACR10; TrEMBL-Plants: tr|A0A0B2QFD1|A0A0B2QFD1_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0686900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125396107..125399588) extracted from Lotus japonicus Gifu genome v1.2.
TGTTGGGTTGTGACATGTCATTGTCTCCTCAAGTGTGGGCAAAAGATATCCATTAACCATGGTTGGATACATTAGCATAC ATAGTTGACACTTTATGTTAAGGGAGTTCCCATTCCCATTACAAGTTAACTAGTTTAGTGGAGTGACATTTTCATACACT CACAAACAACAAGCCCAAACCCATCACTGTAATTTCATTTTTCATCTCTCTTACTCTCTCTTCTTCTCCATTTATTGCAG CCTACCTAGAAATCCGAAACTGAAAGATGCGGTTATTAAAGATTAAAACTTTGACAACGATTCAGTATCAGGAATCGGAA AATATTGAATCTTTGCACACAGTATTTGTAGTACCACAGTAAAAACAAGTTTTACACACCAAACAAACAAAACAACCCTT CTGAATCAAAACCACTGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACATGGGTATATTGCAGGATGAT GTGGTGATTATCAGGCCACCAGAGAAAGAAGGTGAAGCAACTGTGATAACAGTGAATTGTCCCGACAAGACTGGTCTAGG TTGTGATTTGTGTCGCATAATACTGTTTTTTGGTCTTAGCATTGTCCGAGGAGGTAAGAAGCAAATTTTTTGAGGTGGGA TTGGTTCAAAATCTAATCTTTCTCTTTTGTTTTTGTTATTCATGTGAATTTGTGATGTTGTGTGGTGTGTTTTGGGGTTG TTGAGAGTTTGAGACTGATTTGTTTGTTTGTTTGTTTTTCATGTGATGATTGAAGATGTGTCTACTGATGGGATATGGTG CTACATAGTTTTTTGGGTGGTGGGGAAGCAGAAGACAAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGGGGCATGTCCTA CTTGTTCTTCAGCTTCTGGAATTTCTTATTACTGCTCTGACTTGCAGCCTCCCAAGCCCCCTGATGTGTTCCTTTTGAAA TTCTGTTGCCATGATCGTAGTGGCCTTTTACATGGTAATTTGGATTCAAACTACTGATCAACATGTTTGTACTTTTCATT TTGGAATTTGTTTGATTGTTGTCAAAATCATGGTAGAAGGAAAAGGAACTGATAGTCTTACAATGGCAATTGATGTCGTC ATCTATAGCACTTTAGAATTCTAAAGTTTGATTGTGTATTTCTTATGGATTCTCTATTTACCTTGAATTGTCATTCTTTT TAGGTATGTTGATATATCTGGATAAAGCTTTTTGTGTGTTTGATTGTGTTGACAAAATAAACTGAATGTGTTTATGATTG TGATTTGTGACAGATGTCACCGAGGTTCTTTTTGAGCTAGAGCTTACCATAAAGAAAGTGAAGGTGTCTACTACACCTGA TGGCAAAGTGGTGGATCTGTTTTTCGTCACGGATACCAGGTTGTCCATTTCTATGTAAATACATTTTTTGAACAAGCTTT TGTTGTAATTAGGTGCCCTATACTTGCTAGTTCATTTCAACCAAAAGTTCTTTATCTATTCACTAAGGATGTGGGTTTGG TGAGTTGGATTCCTATGTTTTCTTTTAACAGTTACAAAAAGAGGAACTAGAATGGGACTGGTAAGGTAGCTGGAAACAGT TGATAGATATAAGTATAACTTCAGTTTTGAAATTTTGTGCTGAACTTCTATAATCCTGATAGCTATTCTTTCCTATTCTA ATAGAATCAATTTTCATTTGCTCAGGGAAATGTGCTAATAATGTTTTATATAACTGACATTTTCCATTAGACGATTTTGA AATTGGAGACTGATTTTCTGATGAATGCCAAGAACATTTGATGACAATTCAATCTGCATTTACTAAACTAACAGCTCACT GCTGAATCTTGTATAATCAGGGAACTTCTACATACAAAGAAGAGAAAGGATGACACAATTGAGCAGTTAACAGCCGTTTT GGATGATCCCTTAATCACCATTGACATTCAATTGATTGGCCCTGAAACTACTGCTTGTTCTCAAGCATCTTCATTTCTTC CAAATGCAATCACAGAGAATGTCTTTGAATTGGAAAGTTGGACTTCCACATCAAATTCTGTTTCGATTGAGATGGACAAC ATGCTGAGTGCTGCTCACACGCTTGTCCAAATCGTGTGCCGCAATCACAAAGGTCTTATTTATGACATCATGAGAACTAT GAAGGACTACAATGTTCAGGTATAGTGTTGTCAGTAGAATTTATAGATAAGTCTATAAACTTTATACACTATTAAATGTG TAGTTTTTTTGGATGTGCTGTTACTTGATCCTTCTTGTAAAATTTCATCTTCCTTTTAGCATGGGCCGGTTTGTCTCATT CCAAGTAACTTGAAACAATAGCATGCCTATACTTTCTTATAACATGTTTGGATCAGCTTACTTTTCCTCAGGATCAATTC TAACACGCATAAGCTTTTCCCCAGAATTGATTTTACCTTTAAAATCAATTGTGGATGGTTTTCCATAAATGCACTTGGTC ATCTTATTTGGCATCCTAAATGACCAAACTTGTCATTTAAACAGATTTCGTATGGGAGATTAGCAACAAAACCTACAGGA AAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGGAAAAAGATAGTTGACCCCAGCAAGCAGATGTCTTTGTCATC GCGCCTTCGGATGGAACTACTTCATCCGCTCAAAGTGGCTGTTATTAGCAAGGGACCTGATACAGAGCTTCTGGTTGCAA ACCCTGTGGAGTTGTCCGGCAAAGGAAGGCCTCTTGTTTTTTATGACATTACTCTTGCTCTCAAAATGCTTGGCCTTGTC GTCTTCTCGGTACTTTCTGATCTTTTCTACTTTACTTCCTACGTATTGCATGTTTGGAAACTTTTCTACAATTGATTCTA AAAGGCAGAATCAATTATGGAGCGAAGTTTCTATAAGTAGCTTTTAGGTACCAAAATTGATTCTGTGTTATTAGAGGTAT GCATTCTGATTAATTGTTTCAACAGGCTGAAGTTGGAAGACATATGATTGGAGATCGCGAGTGGGAAGTTTATAGAGTCT TGCTTGATGAAGGAGGGGAAGGTTTATCTGTTCCAAGGGACAAGATTGAGCAAGGAGTTTGGAACATGTTGATGGGTTGG GAGTAGTAGCAAGCAATACATGGTTGGTGGCATTGTTCTTTTGGATGAACCTGTGCCAGTGTACAGTTAACATGATTATC ATATAGTTTTTAGATTTAACTAATGTAATTATGATCTTTAATTAGCAATGTTTCTACTTTATACTCCCTCCGTTCCTTTT TATTTGTCTTTCTAGCACAATTTTTTTTGTTTCCTTTTATTTGTCATTTGGTGATTTAAGGTTACATTGTACCAATTATA CCCCTAACACAATCTCATTTATTCCATTCAAAGTTTAGTAGTGGAAATTTGAATTTAATGAGCTTCCTGAAAACTGTGTT GTCTTTCTTGCTTCAAAATTTCATTGTCCAATCTGATTTTAG
CDS sequence (LotjaGi1g1v0686900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTATATTGCAGGATGATGTGGTGATTATCAGGCCACCAGAGAAAGAAGGTGAAGCAACTGTGATAACAGTGAATTG TCCCGACAAGACTGGTCTAGGTTGTGATTTGTGTCGCATAATACTGTTTTTTGGTCTTAGCATTGTCCGAGGAGATGTGT CTACTGATGGGATATGGTGCTACATAGTTTTTTGGGTGGTGGGGAAGCAGAAGACAAGGTGGAGTTTGTTGAAGAAGAGG CTAATTGGGGCATGTCCTACTTGTTCTTCAGCTTCTGGAATTTCTTATTACTGCTCTGACTTGCAGCCTCCCAAGCCCCC TGATGTGTTCCTTTTGAAATTCTGTTGCCATGATCGTAGTGGCCTTTTACATGATGTCACCGAGGTTCTTTTTGAGCTAG AGCTTACCATAAAGAAAGTGAAGGTGTCTACTACACCTGATGGCAAAGTGGTGGATCTGTTTTTCGTCACGGATACCAGG GAACTTCTACATACAAAGAAGAGAAAGGATGACACAATTGAGCAGTTAACAGCCGTTTTGGATGATCCCTTAATCACCAT TGACATTCAATTGATTGGCCCTGAAACTACTGCTTGTTCTCAAGCATCTTCATTTCTTCCAAATGCAATCACAGAGAATG TCTTTGAATTGGAAAGTTGGACTTCCACATCAAATTCTGTTTCGATTGAGATGGACAACATGCTGAGTGCTGCTCACACG CTTGTCCAAATCGTGTGCCGCAATCACAAAGGTCTTATTTATGACATCATGAGAACTATGAAGGACTACAATGTTCAGAT TTCGTATGGGAGATTAGCAACAAAACCTACAGGAAAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGGAAAAAGA TAGTTGACCCCAGCAAGCAGATGTCTTTGTCATCGCGCCTTCGGATGGAACTACTTCATCCGCTCAAAGTGGCTGTTATT AGCAAGGGACCTGATACAGAGCTTCTGGTTGCAAACCCTGTGGAGTTGTCCGGCAAAGGAAGGCCTCTTGTTTTTTATGA CATTACTCTTGCTCTCAAAATGCTTGGCCTTGTCGTCTTCTCGGCTGAAGTTGGAAGACATATGATTGGAGATCGCGAGT GGGAAGTTTATAGAGTCTTGCTTGATGAAGGAGGGGAAGGTTTATCTGTTCCAAGGGACAAGATTGAGCAAGGAGTTTGG AACATGTTGATGGGTTGGGAGTAG
Protein sequence (LotjaGi1g1v0686900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGILQDDVVIIRPPEKEGEATVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGIWCYIVFWVVGKQKTRWSLLKKR LIGACPTCSSASGISYYCSDLQPPKPPDVFLLKFCCHDRSGLLHDVTEVLFELELTIKKVKVSTTPDGKVVDLFFVTDTR ELLHTKKRKDDTIEQLTAVLDDPLITIDIQLIGPETTACSQASSFLPNAITENVFELESWTSTSNSVSIEMDNMLSAAHT LVQIVCRNHKGLIYDIMRTMKDYNVQISYGRLATKPTGKCEIDLFIMQADGKKIVDPSKQMSLSSRLRMELLHPLKVAVI SKGPDTELLVANPVELSGKGRPLVFYDITLALKMLGLVVFSAEVGRHMIGDREWEVYRVLLDEGGEGLSVPRDKIEQGVW NMLMGWE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 407 | 406 | 7.3E-243 | – | |
| PANTHER | 2 | 407 | 406 | 7.3E-243 | ||
| SUPERFAMILY | 18 | 81 | 64 | 4.2E-8 | – | |
| Gene3D | 105 | 190 | 86 | 1.9E-6 | – | |
| SUPERFAMILY | 107 | 181 | 75 | 1.02E-9 | – | |
| ProSiteProfiles | 111 | 194 | 84 | 12.995 | ||
| Pfam | 112 | 167 | 56 | 2.6E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0686900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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