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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0688300 |
| Transcript ID | LotjaGi1g1v0688300.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT2G36880.1 methionine adenosyltransferase 3; Swiss-Prot: sp|Q6SYB9|METK2_TOBAC S-adenosylmethionine synthase 2; TrEMBL-Plants: tr|I3SQ78|I3SQ78_LOTJA S-adenosylmethionine synthase; Found in the gene: LotjaGi1g1v0688300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125557051..125558445) extracted from Lotus japonicus Gifu genome v1.2.
TTAGCTAAATCATCATGGAAGGTAACATTTTAGGTACTTATAACAGTAATATCAGGTCAATCTAAACATGTAGTTGCAAT CAAATAAAAAATATACGTCGCTTGATTAACTCTATGATACTTGTAATAAATAAAGACTTGTAGGCTCATGATAGCTTCTT TGTGCAAGAAAATCTAACAAATATTTTCTTCTCCTGCCTCCTTTTTGAATAACAGAGATGGATACCTTCCTCTTCACCTC AGAATCTGTAAATGAAGGTCACCCCGACAAGCTGTGCGACCAGGTTTCCGATGCCATCCTAGATGCATGCTTGGAGCAAG ACCCAGAGAGTAAGGTTGCTTGTGAGACCTGTACAAAAACTAACATGGTTATGGTCTTCGGTGAGATCACAACCAAGGCA AATGTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGGATTGGGTTTGTGTCAGCTGATGTTGGTCTTGATGCTGA CAACTGCAAAGTTCTGGTCAACATTGAACAACAGAGTCCTGACATTGCTCAAGGAGTTCACGGTCATATGACCAAGAAAC CAGAGGAAATTGGTGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGACGAAACACCTGAGCTAATGCCACTCACT CATGTGCTTGCCACTAAGCTTGGTGCAAAGCTCACTGAAGTTAGAAAGAACAAGACATGCCCATGGCTGAGGCCTGATGG CAAAACCCAAGTGACTGTTGAGTACCGGAACGACAATGGAGCCATGATCCCCCTCCGGGTGCACACAGTTCTCATCTCAA CTCAGCATGATGAAACTGTCACAAATGAACAGATTGCTGCAGATTTGAAAGAGCATGTGATCAAACCTGTCATCCCAGCA AAATACCTTGATGACAATACTATCTTCCACCTCAACCCCTCTGGCAGATTTGTGATCGGTGGACCCCATGGAGATGCAGG ACTCACTGGCCGGAAGATCATCATTGACACCTATGGTGGTTGGGGCGCTCACGGTGGTGGCGCCTTCTCCGGCAAGGACC CAACCAAGGTCGACAGAAGTGGCGCGTACGTTGTTAGGCAGGCAGCGAAGAGTGTGGTAGCTTCAGGGCTTGCTCGGCGT TGCATTGTGCAGGTTTCTTATGCAATTGGAGTCCCAGAGCCACTTTCTGTATTTGTAGACACATACAAAACAGGGAAGAT TCCAGACAATGAAATCTTGGCTCTGATTAAGGAGAGTTTTGACTTCAGGCCAGGAATGATTGCCATCAATCTTGACCTCA TGAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGCCATTTTGGACGTGATGATGCTGATTTTACTTGGGAG ACCGTGAAGGTGCTCAAGCCAAAAGCTTGAGTTAA
CDS sequence (LotjaGi1g1v0688300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGATGGATACCTTCCTCTTCACCTCAGAATCTGTAAATGAAGGTCACCCCGACAAGCTGTGCGACCAGGTTTC CGATGCCATCCTAGATGCATGCTTGGAGCAAGACCCAGAGAGTAAGGTTGCTTGTGAGACCTGTACAAAAACTAACATGG TTATGGTCTTCGGTGAGATCACAACCAAGGCAAATGTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGGATTGGG TTTGTGTCAGCTGATGTTGGTCTTGATGCTGACAACTGCAAAGTTCTGGTCAACATTGAACAACAGAGTCCTGACATTGC TCAAGGAGTTCACGGTCATATGACCAAGAAACCAGAGGAAATTGGTGCTGGTGACCAAGGCCACATGTTTGGCTATGCCA CAGACGAAACACCTGAGCTAATGCCACTCACTCATGTGCTTGCCACTAAGCTTGGTGCAAAGCTCACTGAAGTTAGAAAG AACAAGACATGCCCATGGCTGAGGCCTGATGGCAAAACCCAAGTGACTGTTGAGTACCGGAACGACAATGGAGCCATGAT CCCCCTCCGGGTGCACACAGTTCTCATCTCAACTCAGCATGATGAAACTGTCACAAATGAACAGATTGCTGCAGATTTGA AAGAGCATGTGATCAAACCTGTCATCCCAGCAAAATACCTTGATGACAATACTATCTTCCACCTCAACCCCTCTGGCAGA TTTGTGATCGGTGGACCCCATGGAGATGCAGGACTCACTGGCCGGAAGATCATCATTGACACCTATGGTGGTTGGGGCGC TCACGGTGGTGGCGCCTTCTCCGGCAAGGACCCAACCAAGGTCGACAGAAGTGGCGCGTACGTTGTTAGGCAGGCAGCGA AGAGTGTGGTAGCTTCAGGGCTTGCTCGGCGTTGCATTGTGCAGGTTTCTTATGCAATTGGAGTCCCAGAGCCACTTTCT GTATTTGTAGACACATACAAAACAGGGAAGATTCCAGACAATGAAATCTTGGCTCTGATTAAGGAGAGTTTTGACTTCAG GCCAGGAATGATTGCCATCAATCTTGACCTCATGAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGCCATT TTGGACGTGATGATGCTGATTTTACTTGGGAGACCGTGAAGGTGCTCAAGCCAAAAGCTTGA
Protein sequence (LotjaGi1g1v0688300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEMDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVNYEKIVRDTCRGIG FVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHMTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRK NKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPAKYLDDNTIFHLNPSGR FVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSVVASGLARRCIVQVSYAIGVPEPLS VFVDTYKTGKIPDNEILALIKESFDFRPGMIAINLDLMRGGNFRYQKTAAYGHFGRDDADFTWETVKVLKPKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 393 | 393 | 1.5E-163 | ||
| PANTHER | 4 | 393 | 390 | 1.1E-272 | – | |
| PANTHER | 4 | 393 | 390 | 1.1E-272 | ||
| Hamap | 5 | 393 | 389 | 49.649 | ||
| SUPERFAMILY | 6 | 112 | 107 | 1.1E-46 | ||
| Pfam | 7 | 104 | 98 | 2.5E-42 | ||
| TIGRFAM | 8 | 390 | 383 | 3.4E-166 | ||
| Gene3D | 8 | 243 | 236 | 1.2E-171 | – | |
| CDD | 8 | 387 | 380 | 0.0 | – | |
| Gene3D | 14 | 280 | 267 | 1.2E-171 | – | |
| Gene3D | 105 | 386 | 282 | 1.2E-171 | – | |
| SUPERFAMILY | 118 | 242 | 125 | 2.21E-53 | ||
| Pfam | 120 | 241 | 122 | 1.4E-47 | ||
| ProSitePatterns | 122 | 132 | 11 | - | ||
| Pfam | 243 | 384 | 142 | 1.3E-61 | ||
| SUPERFAMILY | 243 | 389 | 147 | 5.1E-61 | ||
| ProSitePatterns | 269 | 277 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi1g1v0688300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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