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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0688300 |
| Transcript ID | LotjaGi1g1v0688300.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT2G36880.1 methionine adenosyltransferase 3; Swiss-Prot: sp|Q6SYB9|METK2_TOBAC S-adenosylmethionine synthase 2; TrEMBL-Plants: tr|I3SQ78|I3SQ78_LOTJA S-adenosylmethionine synthase; Found in the gene: LotjaGi1g1v0688300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125557056..125558522) extracted from Lotus japonicus Gifu genome v1.2.
TACTTAAGGACTTGTAAGATAAGTTCCAGTAATCTTCTTCAACCCCCCTCCCCTTTAACATAATCCTTGCATGACATTTA GCTAAATCATCATGGAAGGTAACATTTTAGGTACTTATAACAGTAATATCAGGTCAATCTAAACATGTAGTTGCAATCAA ATAAAAAATATACGTCGCTTGATTAACTCTATGATACTTGTAATAAATAAAGACTTGTAGGCTCATGATAGCTTCTTTGT GCAAGAAAATCTAACAAATATTTTCTTCTCCTGCCTCCTTTTTGAATAACAGAGATGGATACCTTCCTCTTCACCTCAGA ATCTGTAAATGAAGGTCACCCCGACAAGCTGTGCGACCAGGTTTCCGATGCCATCCTAGATGCATGCTTGGAGCAAGACC CAGAGAGTAAGGTTGCTTGTGAGACCTGTACAAAAACTAACATGGTTATGGTCTTCGGTGAGATCACAACCAAGGCAAAT GTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGGATTGGGTTTGTGTCAGCTGATGTTGGTCTTGATGCTGACAA CTGCAAAGTTCTGGTCAACATTGAACAACAGAGTCCTGACATTGCTCAAGGAGTTCACGGTCATATGACCAAGAAACCAG AGGAAATTGGTGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGACGAAACACCTGAGCTAATGCCACTCACTCAT GTGCTTGCCACTAAGCTTGGTGCAAAGCTCACTGAAGTTAGAAAGAACAAGACATGCCCATGGCTGAGGCCTGATGGCAA AACCCAAGTGACTGTTGAGTACCGGAACGACAATGGAGCCATGATCCCCCTCCGGGTGCACACAGTTCTCATCTCAACTC AGCATGATGAAACTGTCACAAATGAACAGATTGCTGCAGATTTGAAAGAGCATGTGATCAAACCTGTCATCCCAGCAAAA TACCTTGATGACAATACTATCTTCCACCTCAACCCCTCTGGCAGATTTGTGATCGGTGGACCCCATGGAGATGCAGGACT CACTGGCCGGAAGATCATCATTGACACCTATGGTGGTTGGGGCGCTCACGGTGGTGGCGCCTTCTCCGGCAAGGACCCAA CCAAGGTCGACAGAAGTGGCGCGTACGTTGTTAGGCAGGCAGCGAAGAGTGTGGTAGCTTCAGGGCTTGCTCGGCGTTGC ATTGTGCAGGTTTCTTATGCAATTGGAGTCCCAGAGCCACTTTCTGTATTTGTAGACACATACAAAACAGGGAAGATTCC AGACAATGAAATCTTGGCTCTGATTAAGGAGAGTTTTGACTTCAGGCCAGGAATGATTGCCATCAATCTTGACCTCATGA GAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGCCATTTTGGACGTGATGATGCTGATTTTACTTGGGAGACC GTGAAGGTGCTCAAGCCAAAAGCTTGA
CDS sequence (LotjaGi1g1v0688300.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATACCTTCCTCTTCACCTCAGAATCTGTAAATGAAGGTCACCCCGACAAGCTGTGCGACCAGGTTTCCGATGCCAT CCTAGATGCATGCTTGGAGCAAGACCCAGAGAGTAAGGTTGCTTGTGAGACCTGTACAAAAACTAACATGGTTATGGTCT TCGGTGAGATCACAACCAAGGCAAATGTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGGATTGGGTTTGTGTCA GCTGATGTTGGTCTTGATGCTGACAACTGCAAAGTTCTGGTCAACATTGAACAACAGAGTCCTGACATTGCTCAAGGAGT TCACGGTCATATGACCAAGAAACCAGAGGAAATTGGTGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGACGAAA CACCTGAGCTAATGCCACTCACTCATGTGCTTGCCACTAAGCTTGGTGCAAAGCTCACTGAAGTTAGAAAGAACAAGACA TGCCCATGGCTGAGGCCTGATGGCAAAACCCAAGTGACTGTTGAGTACCGGAACGACAATGGAGCCATGATCCCCCTCCG GGTGCACACAGTTCTCATCTCAACTCAGCATGATGAAACTGTCACAAATGAACAGATTGCTGCAGATTTGAAAGAGCATG TGATCAAACCTGTCATCCCAGCAAAATACCTTGATGACAATACTATCTTCCACCTCAACCCCTCTGGCAGATTTGTGATC GGTGGACCCCATGGAGATGCAGGACTCACTGGCCGGAAGATCATCATTGACACCTATGGTGGTTGGGGCGCTCACGGTGG TGGCGCCTTCTCCGGCAAGGACCCAACCAAGGTTTCTTATGCAATTGGAGTCCCAGAGCCACTTTCTGTATTTGTAGACA CATACAAAACAGGGAAGATTCCAGACAATGAAATCTTGGCTCTGATTAAGGAGAGTTTTGACTTCAGGCCAGGAATGATT GCCATCAATCTTGACCTCATGAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGCCATTTTGGACGTGATGA TGCTGATTTTACTTGGGAGACCGTGAAGGTGCTCAAGCCAAAAGCTTGA
Protein sequence (LotjaGi1g1v0688300.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVNYEKIVRDTCRGIGFVS ADVGLDADNCKVLVNIEQQSPDIAQGVHGHMTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKT CPWLRPDGKTQVTVEYRNDNGAMIPLRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPAKYLDDNTIFHLNPSGRFVI GGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVSYAIGVPEPLSVFVDTYKTGKIPDNEILALIKESFDFRPGMI AINLDLMRGGNFRYQKTAAYGHFGRDDADFTWETVKVLKPKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 278 | 278 | 1.1E-244 | – | |
| PANTHER | 1 | 278 | 278 | 1.1E-244 | ||
| PIRSF | 1 | 279 | 279 | 4.0E-118 | ||
| SUPERFAMILY | 3 | 109 | 107 | 9.42E-47 | ||
| Pfam | 4 | 101 | 98 | 2.1E-42 | ||
| Gene3D | 5 | 242 | 238 | 4.9E-126 | – | |
| TIGRFAM | 5 | 278 | 274 | 1.8E-124 | ||
| CDD | 5 | 356 | 352 | 0.0 | – | |
| Gene3D | 11 | 274 | 264 | 4.9E-126 | – | |
| SUPERFAMILY | 115 | 239 | 125 | 1.88E-53 | ||
| Gene3D | 117 | 139 | 23 | 4.9E-126 | – | |
| Pfam | 117 | 238 | 122 | 1.2E-47 | ||
| ProSitePatterns | 119 | 129 | 11 | - | ||
| SUPERFAMILY | 240 | 358 | 119 | 1.21E-43 | ||
| Pfam | 240 | 278 | 39 | 8.4E-19 | ||
| ProSitePatterns | 266 | 274 | 9 | - | ||
| Gene3D | 275 | 362 | 88 | 6.5E-29 | – | |
| Pfam | 277 | 353 | 77 | 8.6E-20 | ||
| PANTHER | 277 | 362 | 86 | 1.1E-244 | – | |
| PANTHER | 277 | 362 | 86 | 1.1E-244 | ||
| PIRSF | 277 | 362 | 86 | 1.0E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi1g1v0688300.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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