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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0689700 |
| Transcript ID | LotjaGi1g1v0689700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transmembrane protein, putative; TAIR: AT2G37035.1 transmembrane protein; Swiss-Prot: sp|B9K7Z1|Y898_THENN Nucleotide-binding protein CTN_0898; TrEMBL-Plants: tr|A0A1J7GX35|A0A1J7GX35_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0689700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125735512..125743074) extracted from Lotus japonicus Gifu genome v1.2.
CAATACGGATAAGTCTTTTTAATAGTTCATTTTTTGCATGTTTTATTTAGGAAATAAATAGCTTAAAGACTCTTCTCTCT TCTCCTCATCCTCCTCTACACTAGTAAATATATGAAATTATTAATATTGTGATTGTATTATTTCATGGAGCGTTGAAATG ACGACCGTAGCTGAGCGCGTGAAAGTGTCACGGTCATAGCCAGCCAGCCACCTCCTCCACCTCCTCCATCTTCATTCTTG AATCACCACACTGTGTTGTTGTCTTGTGTCGTGTTTGGCAACAACAAAATCACAAACCAAAAATCAATTCCATTCATCTT CAAAATCGCTGCGATGAGCGACGATCTGATTCCTCCACGGTTGCTGAATCTCCGTTCAACTTCACACCTCCTCAAAGAAG CCACCTCTTCCTTCTCCTCCAACCTCCTCACATTCCTCTTCCTCTCTCTCCTCATCCTCTCCTTCCGCACCGTCGTCGAA AACGGCACCTCCCATGTCACCTCCTTCATCGACCGCGATCCCTCTCTTCGCGCCCTCCTCTCCCGCCTCGACCTCGCCGG AAACGGAAACGGAAACTCCAACCGCCCTCACGACCACCACTCACCTTCTCACTCCCCCCGCCGCCGCCCCTTTCTTCATC TCACCCGCGTCGGAACCCTAGACGACGACTTCTTCTCCGGCGACGACGACGACGGCCGCTCCCTCTTCGGCTCATCCCCT AAACCACCTCTCAACGCAACTCTCCTCGCGTTGGGACCGTTCCGCTTCTCCGATCCCGTCGCCGATGACGGTGTTAGGGT TTCCGGGGTTGTCCGTCCCGGAACCACGTTTAAAGCTGAGGGACTCGACGGCGATAATCACGAGGTGGAGCAAGAAAACC AGGAGGAGGAGATGAAGAACGATTTGGGGAATGGGCAAGAAATGGAGAAGGGTGTGGACTTGCGATTCTTTGTGAAGGGG TTGGAGGTGGGTCATCGTGACGCGGCGGCGCTGTTTTTTCTGGTGAGTTTCTTGTCTGCTGCTTATGGATGGGTGATTCT TGTGTTTCTGGTGACGTATTCGTGGGTTCTAGGGGTTGTTTTCGTTGCTGTTGTGAATGATCTGGTAGGGAGGTTTAGCT CGGTTACTGGGTTGGTTTGGGATGGTTCAAGATTAGGTCTCAAGAGGCTTTCAGGGTTTATTCTCATGAGATGGGCTGTG AGGGATGCATTGACTCAGCTTCTGGGGTTGTGGTATTTTGGTGAGATTGAGGATCAGTACTCGTTTTTCAAGCTGTTTGT GAGGTTGAAGTTGATGCCGTTCTCGGTTATGTCGCCTTGGGTTCGAGGGTTTGAGAAGGAGATTTCAGGGTTCTTGTTCA CTTGGTTTCTAGTGGATACTTTTGTGGCTTTTATATTTGCGGTGGATGCTTGGGTTGCCATAGTGGACTCGAGGAGGAGT GGAAGGGAGATTGTGAAGGAAGGTTGTTATTTGATATCGACCATGTTCAACCAAGCTATACAGATAAAATGCTTGGAGGC GGTGCTTTGCGGGTCGTTTGTGAGATGGGGTTTGAGCAGGATTTGCGGGAGAACTTTTGCCAAGATGTTTCAGTCGACCA TGGAGGTTTACTTCATGGTTACTTGGCTTGTGTTCTACTTTGCGGCTAGGTGTAGGGATGCTAATCTGCAAGGTAGGAGG TTTGGTCAGAGAGAATTGGAAGGCTTGATTGATGGTCACAGATGATACGATACTTGGTGGTGATTGGAGGCAGTTTGTCG TGCGGGATTTTTTTGTTGTGATGCACAAGCAGCAGCAGCAATGCTTCACAGGTTAATGTCCCCCCTCTTTTAGAGTTCCT GTTAGCCATCACCGCCATTCTATATAGTTTTTGTCACCAACAATGTGTTGATTGTACTTCACCTGAAGGCCAATATACTT CTTGTGTATATTAAGGAGGATACTTCATATGTATATTGTTCATGGAATCATTTAATTAGTTCATGCAGTCTGTGTTGGTG ATGATAGTCAGAAATTACAAGCTTTGAGAAATGAAGAATGGTAATGATTTTTCTCCATGCAACATGGAATTTCGTTGTGC TAACAAAAGTTGCCACTTAGCATTTCTGTTTACTTGGTGTCATATTATATTCTTTATGGACAATTTGTGGCAGTGGACAT CATCTACAAGAACACTGAAAAGCACATTAATCTGCAAAGAACTGGGAAAATAATTGAGTTATGCATTGTTTCCCCCTGTT GGAAAGTCTCCAAGAAGGTCATTCAGGTTAAAGTACTGTATGTTTGTTTTGCATGGTTACCTCTTTTGATAAGCGAGCCT CTGTATTTTCTGATGTGTAAAATCATCCTGCAGAAATTTTATAGAATTTGTTTGCATCATAGAGTAGTTACTTTGGCATG GTTTGAATGAGAGGAAAAATAGTGTTCATAACCAAGTTAGGGATATATCCTCGGGGCATTCCCAGTGTTGAAATTGATTA ATGAAAAACCGTGTTTAGTTCTGCAAGACTGTTTATTAGTACTAGTTAGAGTTAATAATTGATGTTGTATGCTGGCTGAT ATGCTTATGCTCATTTGATGGCTTCTTGATTGTTAATGCTTTTCTTGTAATCTGCCTTGAAGAATGCAGTTTTGATGTAT AGATGTTTTGTTAGCTTAAAAGGGGTCATGTGATGGGGGTCAGTGGTATAAACACTGTGCAAATGCATCTTGATTGCAAT TCAAGGAATGGTAGTCTCCCTGCTGGTTGTCTGTGATATGATTATTGTTGCTTGTGAAATGATTCCAGTTTCCCAGGACA TATAGTAATTAATTTCTATGATATGATTAAGAGTGAAAGTAGAAAATAATTTCTCAAATGGAAGATGCTATAGAAGTCTC TTAAGGGTTCCCCTCATCTATTGCTTATAACAATCCCATTAATATGACTTTAGGTTACCTCCCTGTTCAATTCTGCATCG TGAGCTGACTGACTGATAATAGGACCACTGTAAGGGAGGGTGAAGGGACCATTTTTTAACCCTTTGCAAGTTTGCATACT ATGGGGCAAAGGAAACAAACAAACAATTCCTGTTTCCTTCAAAATAGCAGATATTGAATTGTATAAGCTTGACAGTTTAA CACTCTCACTGTCTCAGTAAGGATCAATGCTAGACAAAAGCTGTGTGGTTATTTAGCCATCGCATTTGCCTGTTGTACAA TCAATTCTTTATTTCTTTTCTAGCACTATGGAAACAAATGATGATATTTATGGTAGGCGGTTGCTTCCCAGAAGCACTTA CCAGATTCCTCGCCAGTATCGCCCCCACCTTTCCTTACATGTGGGCATAACAAAGTATTCTTGTCTCATCTGTTAGTTTC ACTTGCATTTGGATTTTCACCCCTTGCATGTTGGTATATTAATCTCTCTTTGCAATATGATACAAAACCAGTAATCTAAT CTGTCTTCACTCAATAACTTTAGTTTTTGGTATAGTTGTTTCATAACATGGTATTAGAGTCTAGCCTATAACTGATTATT GGCTCACCCATAAATGTTAGAAATATAATATGAAATCACTTTTGTGTTTTCGTCAGCAACTTGATCTTCATGGTTATTGC AATATCAACTCTTGAATGATAGCAAGTTATGAATTGAAATTTATTAATATACTCAAATACATCTGTTTGTTAGCTAACTC ACTGCTAAAAAGAAGCAAATGGTCCATTATATATAATATATAAGTATATGTATGGTTAAAATTACATTTTAAATAAAACA ATCTTAGTAAGTTATTATAATTTAGTCTAAATTGGTTTCCGCTCTTGCTAATAAAAATAACTTTTATGCCAGCACCTTCT GCTGCTGGATCTGATAATGGGTTTGTTTTCTGCTACCTCCATGCTTCAAGTAAATATCATTTTTTTTATGGTAAGTAAAT ATCTTTATATCAGCCAAAAGTACAAAAGAAAAATGTATGCACAGTCACTGTTTTGCACTTATTGTTGTGAATAAAATTTC AAAGAGGAGATGGTTCGTTTAAGGCAGAAGCAGCCTTCAATCCTAAATGACACTTAAAACAAGACCTCCATTTTTCTTCA TCTCAGAGAAATGAGTGGGAGTTCAAATCCGAGACTCGTCATACGCAACTTCCTATTTTGCTCCCCTTCACAACCCCTTA AAGTTGTTGCTTTCAGTGTCTCGGTTCATCAGTCCCTCGACTGAACATTCTTCTGAGTTGTTTAACAATGAAAATTACGA CTAATTTACAATCTCTGTTGATCTAACATGTTTGAGACTGAAAATATCTATTAATATATAACTTCTGCTGATTTGGACAT TATGCTGGTATAATTTTGATCCTCATACCATGTATTGTATTCCATATCTTTTAAATGTGCCATACCATGTATTGAATCAT GAACATGGCCCAGTGGGTCTAAACTGAGTAACTTGTTGAAAATTTGACTTTCTTTTGCCCATTTACAAATCCTGCATCTT CCCCTGATAAGAGCTATAAAGGGAAAGAAAAAACCAGCATCAAGTTTCTTATACCCCTTTCTATTGAGTTTTCAAATCTA TTATGTGGATGCTTCTTTCTTCTAACATTCACTGGCCTTCATTAAAATATATTAGAATTTTAGAAACTATATTTATATAT AACTTTGCTTGATTTGAGAAGTTGATGGTAAGATATATACAATTCAATCAAAGTTTTGACAGGCTAGAAAACATAATCGG AAGCTGTTCCTGAATTGATTCAAATTGGGGAGCTACAATACAATATGCCTCAATGCCTCAATCTACATATTAACATAGTT GTTAGAAATTGAAGGGTATGACCTAATGATTAAAGTTGTGTTTGGATTGCATTTACATCAATGTGAACGGACTTTCATAC GCACTTCAAGACAGGAAAGTGATCAGTGCTATTCTTATGAACTAAACTGAAAGTCCGTTCACGTTGTATTTAACCAGCAT CCAAACACACTAAAACTCTACACACAAACACCCTGTCACTTATGCGGATAGCTTGCACAGCGAAGGACACTGAGGAAAAG ATGTTCATTGCAAGGAATACAGAGTTTTGCTTCAGCAATGAAATCATATTCATCCTTAGCTTGATCCAGCAAGGCCTTGA AGAGTGGATGGTTGAGTAATGTAATCTTGATGACAAATCTCTTGTGATTCTCTCCTACATAGACAACCAAGTGACCCTTT GGGACATCATCAGGGATATTGCAGCAGCTTTCATGCATGGAAGACCACAAAGCCCATTGACAGCAATAATCAAAGGAAGC ACAAGGTATCACTCTAGTTCCCATTTTCTTCCACTTGTTAAGACACTCTCTCACTATCTTCCCCTTCATAGTTCCTGGCT AGGTGCTGAACTTGAAATAGATAGAGAGATATAGAGAACTAGAGAAAAAGTACTTAGAGTACTTGGAAGATGAAAAGGTT TATATAATTGAGGTACGGGTAGTACAACTTTCAAGATCATTCAATGGTTGACATGATTCTAAGCTTATGGCAATACAAAT AAAATATATGGCTGATATATATAGTTGCTAGTTGCTTTAGAGCATTGCACCTTGATACAAAACTGTACGAACATGATTGC CAATTTGTATATACATAAAGTGACATATCGTCAATTTTTTGTTCTTATTTTTGATCAAGTGTCACAATTGGTTTTGGTAA AACAGATTATTAATTTAGTAAAAATGTGTTGAAAGTGAAGTGATTTATGTTTGGATACAATTTTGAAAAAATGAGTTTTG TTTGGTATTATTGTGAAATTCAAATGTAAAATCTCACAATTGATTGTATTTGATGCAAAAGATCCAATCTCTAGCTTCTA CTAGAATTGATTCTCGGGCTGAGATCAATTATGCACTAGTATTTTTATCCAAAATTAATTTTATTCTACCAAAATTGATT ATGAGATTTTCAAAAACCAAACACACTCTAAGTTTGTGGTTGCATTAATGCCGATAAAATTGATTCTAGAGAACTTCAAC TTTTGCAAGCATAACTTTAAATAAAAATCAACTTGATAAGTATATATGCTTAAAATGTATTCTTGAAAAGTAATTTTGAT AGATGAAAGTGAATATCGTTTAGATAAACCAATTAAAACAACTTTTGAACGAATGTTTACTAACATGCATCTTATTACTA GTATTTTATTAGAAAATTGTCAACTGTGTAAAATATTAAAAATGAACAAGTTGTTAAGAATTGAAAAATGCCTTAGAAAG TTTCAGAATCTTCACAATTTTCAGAATTATAAATGATTTAAATGATTAAGTCTTAAGACTCTAATTCATTATTCTAATTT ACTATCCTTCCCGGGGTGCAAAGGTTCTGTCTCTCTGTGATTCATGAAGGCCGGTAATTGATCAATGACCTTTCCCAGTT ATTAAAGTTCAGACCCCACAACTTTGGGAGGAAAAGATAAGATATCAATGAGGGATGTGACAAGTTTCTTGGGTGAAGTA CAGAAGGTGAATCCACTTATTTCTCTTAAATTTAGATTTATATTAAATTTAGATTTTAATACATGGTATAACTTGAATCA ATTTCATATTTGATATCTTAACCAATACTTTAGGATATCTGTTAAGGTCACTTTCATTATTTGTATTACTTTCTATTTTA CAAAAGAAGAAGACATAAAAGTAAACTCAATAGATTTTGATGCTGAGTCTTACACGTTACACCTAGTTAATTTTGTCTAT GTTTAATAATATGAAAGCAAAAAGCACAAGAAAACTCTAATCTGTTTCTAATACATGTAAAACATGCTGAATAGATATTG GACGTTGGTTTAGTGCTAGATAGTGGATTACATTGAAGTTTGAAGGTTGAAGCATTCTGGATATTGCTGGCTCTGTTTGG TTGGTTTAAAGGTCTGTCTCAGGGGAGTGGAACTGGAGCTAGTTGACTATTCATTTTGAATGAATTTTTTTTTTGGTAAT ACAAATTTAGGGTGGATGATGATGTTCTAGTACAGGACGGAGAAATCTGTCTCACTCAAAAAATATTTATGAATGACTTA CATTTACTTCACTTTAAAGGAACATAACAAAACGATTAAAGTTATCTGTCAAATATGAGATGTTATCGCGCTCCACTCAT CTAACCATTTAGGGTTATGTTGAAGTGAATTTTGAATTTATTATTCTTATTTGGATTGGTTTAATCTCATTACTTATGTT GAATAATTTTGAATATACACAAAAGCTAATTCTGTATGGCATAAAGAAGGCACTGTCCATACAAAAATATATAACTGAAT TTTCTAGTAGCTTTGTTCTGCACTCTCTGTGTGGCTCTCTGGCATACAGGAAATGGGTTATGCATTTTTTGCATTGGGTG AGGGATGGAAAAAGCATCTACGGTTGCAGAGAGGAGAATGGAAGTCACAATTCTTTACCCTGAAAATTCTGACCCTTGGA AGAATTCACATGTTTGAATTGATTCCCTCTATCCGCTTTCTCATAAAACATTAGGGTGCATGTACGAGAATTATTCTACA GTTGGTTCTGCAAAATCAATAATGGATAGAAACCTTTGGAAAG
CDS sequence (LotjaGi1g1v0689700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCGACGATCTGATTCCTCCACGGTTGCTGAATCTCCGTTCAACTTCACACCTCCTCAAAGAAGCCACCTCTTCCTT CTCCTCCAACCTCCTCACATTCCTCTTCCTCTCTCTCCTCATCCTCTCCTTCCGCACCGTCGTCGAAAACGGCACCTCCC ATGTCACCTCCTTCATCGACCGCGATCCCTCTCTTCGCGCCCTCCTCTCCCGCCTCGACCTCGCCGGAAACGGAAACGGA AACTCCAACCGCCCTCACGACCACCACTCACCTTCTCACTCCCCCCGCCGCCGCCCCTTTCTTCATCTCACCCGCGTCGG AACCCTAGACGACGACTTCTTCTCCGGCGACGACGACGACGGCCGCTCCCTCTTCGGCTCATCCCCTAAACCACCTCTCA ACGCAACTCTCCTCGCGTTGGGACCGTTCCGCTTCTCCGATCCCGTCGCCGATGACGGTGTTAGGGTTTCCGGGGTTGTC CGTCCCGGAACCACGTTTAAAGCTGAGGGACTCGACGGCGATAATCACGAGGTGGAGCAAGAAAACCAGGAGGAGGAGAT GAAGAACGATTTGGGGAATGGGCAAGAAATGGAGAAGGGTGTGGACTTGCGATTCTTTGTGAAGGGGTTGGAGGTGGGTC ATCGTGACGCGGCGGCGCTGTTTTTTCTGGTGAGTTTCTTGTCTGCTGCTTATGGATGGGTGATTCTTGTGTTTCTGGTG ACGTATTCGTGGGTTCTAGGGGTTGTTTTCGTTGCTGTTGTGAATGATCTGGTAGGGAGGTTTAGCTCGGTTACTGGGTT GGTTTGGGATGGTTCAAGATTAGGTCTCAAGAGGCTTTCAGGGTTTATTCTCATGAGATGGGCTGTGAGGGATGCATTGA CTCAGCTTCTGGGGTTGTGGTATTTTGGTGAGATTGAGGATCAGTACTCGTTTTTCAAGCTGTTTGTGAGGTTGAAGTTG ATGCCGTTCTCGGTTATGTCGCCTTGGGTTCGAGGGTTTGAGAAGGAGATTTCAGGGTTCTTGTTCACTTGGTTTCTAGT GGATACTTTTGTGGCTTTTATATTTGCGGTGGATGCTTGGGTTGCCATAGTGGACTCGAGGAGGAGTGGAAGGGAGATTG TGAAGGAAGGTTGTTATTTGATATCGACCATGTTCAACCAAGCTATACAGATAAAATGCTTGGAGGCGGTGCTTTGCGGG TCGTTTGTGAGATGGGGTTTGAGCAGGATTTGCGGGAGAACTTTTGCCAAGATGTTTCAGTCGACCATGGAGGTTTACTT CATGGTTACTTGGCTTGTGTTCTACTTTGCGGCTAGGTGTAGGGATGCTAATCTGCAAGGTAGGAGGTTTGGTCAGAGAG AATTGGAAGGCTTGATTGATGGTCACAGATGA
Protein sequence (LotjaGi1g1v0689700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDDLIPPRLLNLRSTSHLLKEATSSFSSNLLTFLFLSLLILSFRTVVENGTSHVTSFIDRDPSLRALLSRLDLAGNGNG NSNRPHDHHSPSHSPRRRPFLHLTRVGTLDDDFFSGDDDDGRSLFGSSPKPPLNATLLALGPFRFSDPVADDGVRVSGVV RPGTTFKAEGLDGDNHEVEQENQEEEMKNDLGNGQEMEKGVDLRFFVKGLEVGHRDAAALFFLVSFLSAAYGWVILVFLV TYSWVLGVVFVAVVNDLVGRFSSVTGLVWDGSRLGLKRLSGFILMRWAVRDALTQLLGLWYFGEIEDQYSFFKLFVRLKL MPFSVMSPWVRGFEKEISGFLFTWFLVDTFVAFIFAVDAWVAIVDSRRSGREIVKEGCYLISTMFNQAIQIKCLEAVLCG SFVRWGLSRICGRTFAKMFQSTMEVYFMVTWLVFYFAARCRDANLQGRRFGQRELEGLIDGHR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 1 | 463 | 463 | 7.3E-217 | – | |
| Phobius | 27 | 48 | 22 | - | – | |
| Phobius | 49 | 217 | 169 | - | – | |
| MobiDBLite | 76 | 98 | 23 | - | – | |
| Coils | 168 | 188 | 21 | - | – | |
| Phobius | 218 | 238 | 21 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 239 | 243 | 5 | - | – | |
| Phobius | 244 | 269 | 26 | - | – | |
| Phobius | 270 | 280 | 11 | - | – | |
| Phobius | 281 | 302 | 22 | - | – | |
| Phobius | 303 | 340 | 38 | - | – | |
| TMHMM | 340 | 362 | 23 | - | – | |
| Phobius | 341 | 363 | 23 | - | – | |
| Phobius | 364 | 417 | 54 | - | – | |
| Phobius | 418 | 438 | 21 | - | – | |
| TMHMM | 422 | 439 | 18 | - | – | |
| Phobius | 439 | 463 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0689700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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