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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0693500 |
| Transcript ID | LotjaGi1g1v0693500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein IQ-DOMAIN 1; TAIR: AT5G03040.1 IQ-domain 2; Swiss-Prot: sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1; TrEMBL-Plants: tr|G7L1R6|G7L1R6_MEDTR IQ calmodulin-binding motif protein; Found in the gene: LotjaGi1g1v0693500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126115239..126119712) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAGATGAGATAATTAAGATACCGTTACTTTGAATTGATTCTTTGAACTGGTAAAAACTCATTAGGTGGGGCCCACTA TGAGCAACCCAAGTGGCAACTTCATATTATTTTCAGAACAACCAGCTCTTGTTTTAATTCAAACTCTCTCCTCTTGTCAT TTGTCAAGATCTGATTTTCCCTCTTCATACCGAAGAAAATGGTGTAGTGATCTCCAAGTTTCACTCTTTTTGTTCAGATT GAAACTGGGTCGGTCGTAGATTCTTGAGATCTGTCACTTTGTTTCGGTTCAGGTACTCCTTTCCATTCTGCATCTTCATT GTTTTCTTATTTTCGTGTAATTTCACTGTTATTCTGTAATTTCCATGTTAACAATGCCTAATTTAACCAGTTGAATCAAA ACTCTTGTGTTGCTTCGTCGTGAAATTGCTAGTGGAGATGAATTCTATGGTTTAATTGATTGATTTTCAATGTTATTTGT AGAACTAGGATTTGAAAGCTCTTGTTTGGTTTTCTAAACGTGATTTGCTTTAATTTATGGGGTGCCCAGATGAAATTAAT ACAGGATTGTTTGAAAACCAAGGATTTGGAATGTGAATGGCTAGGAAAGATTGAATTTTTCTTGTTCATGATGATTTTCT CTTGGAGAACCATACTCTTCTTTTCCATTTCTTAGCCCAAATAAAAAGAATGATTATATTGTGTTGGTAGGTTACATAAT TTTTAGACAGTTTCCTTTTATGTGTCAAATTTAGTGGTTCTAATGGCATTTTGATTTCCTGTTAAAAATAATTTATTTTG GATTTTGAGGTTCTGGATCTTCAAAATTTTCCTTTTTTTTGGTTTATAGGATCAAATTAAGGAATGCCAAGAAAATGGGG CGGAAGGGAAATTGGTTTTCTACAGTGAAGAAAGCACTCAGCCCTGACTCAAAGGGGAAAAAAGATCAGGTTTGGATTAA ATTTACATTCTAGTTATCTCAACTTTCTGGGAGTTTTACTAATTGTTTTTGCAGAAATCAAGTCCATCAAAGAAGAAATG GTTCGGGAAGCAAAAATTGCTGACTTTAGACTCACACTCAGGAACTGATAAAGCACCACCTCTGCCTCCACCAGAAGAGA ATAAATTAAATGATATTGAAAATGCAAACAGTCACCATCATGTTGCTGAAGTTGTAACTTCCGCGGCTCCTGAGGAACCT GCTCCTTCTGCTCAGGCAGCAGTTGTTAGGATTGGAGCTGGTACAAATGCTCAGTTTGCCGGTAAGCCAAAGGATGAAGT GGCTGCAATCAAGATTCAAACAGCTTTTCGGGGACACTTGGTATGTGTTGCAATTTTTATTTAAACCAATATAAATTTAC TTTGTTTCAGTTACTGAAAAATGTGGATAATTCTTGTTTACTAGATAAGTAAAAAGTTGTACTATAGCAATAGATCAAAT TTTTACTGTCTTAAATTTGAATCCATACAAAAGTTATATATCTTTATAGAATGTGCTCATTATTTGCATGAAGGTAAGAG GCTGTTAGTGACAACCACCTGCAAAAGAAAATTTGTTATGAAACTAAACTTTCTTTTGGAATCAATTAGGCAAGAAGAGC ATTGAGAGCTTTAAGAGGGTTGGTCAGGTTGAAAACGTTGATGGAAGGGCCCGTTGTAAAACGCCAAGCCATAAGTACTC TCCGCTCTATGCAGACGTTAGCTCGCGTGCAATCTCAAATTCGTTCTAGGAGGGTCAGAATGTTAGAGGAGAATCAGGCT CTGCAGAGACAAATCTTACAAAAGCATGCAAGAGAGCTTGAGAGCATGCGGGTATGGGATTAATTTATTTTGAAATACTA ATCTCTTGACACTGAGCCAATTTTATTTGACATTTTAACTTATTTTAAATTGTCATAATAGATTGGAGAGGAATGGGATG ATAGCCTGCAGTCAAAAGAGCAAATCGAAGCCAAATTGCTACACAAGTATGAGGCTGCTACGAGAAGAGAAAGAGCAATG GCTTATGCATTCACTCATCAGGTTTTTTATTTCTCTTCCAAATCTACATATGTGATGATGACATGGATGAAAAAATTTAG ATGAACAGGAACATCATTGGAAAAATATCACATAATTTCAAGAATTAAAATGAAAACCCAAGCACTAATGTTATGGCGTT TACTTGTTACTATACATAATTATCTCTAGAAGCTGTAATCCTTTTCACCTAAAATCTGTGCCTTTTTTGGTTTTTTTTTT TTTTTGAATTTCTTGTTTTCACTGATAATAAAAAAAATGTTTTCTGATTCAAAAAATTGTATAGGAAACAGTTGTTTATT TTCTAATAACAATTGACTGTTTCCTTTGCAAATACGTAAAAGCAAAAGTGAAAATAATGCGACTTTTTGTATTTATACGT GAAAATAGAAAATATTTTCTCAAACAATAGGTCCTTAAGCTTAATGTATGCATAAATCCTTTTCTATCTTGCCACTATCT TCAGAGTCATTTACTCGGCTTAAACCTCTGCAATCTCTTTTCACACTGCCTTGTATAATCTAACAGTATGCTTGGTTAAG TTGTAGCATAATTTGTTCCTCATTTTTTTGTCAATTGTAGTATTTTAGTTAGGTGAAATAAAGTGACATCTTATATATTA TGTGCCTAATATACTTTGAATGAATTGCAATACCTGCCTATGCTATAAATACACGGACAAGTATAGTTTCCTTGATTTTT TGTACAAATTAAGAGCAGAGTTTGACATTTGCAAAACAAACAAAAAATTCTATATGTGACAGCAAAATTGGAAGAACTCA TCTAGATCTACAAACCCAATGTTCATGGATCCAACCAATCCTACCTGGGGATGGAGCTGGTTGGAAAGATGGATGGCAGC CCGGTCCTACGAGAGTCGTAACCTTATGGATAAAGAGCTGAATGATCATTCATCTGTAAGAAGTTCTAGCCGCAGCATTA CTGGTGGAGAAATCAACAGATCATTTGCTCGTTTCCAGCTCAATTCTGAAATCCATTCTCCAGCAGCCAGCCAAAATGCA GGCTCACCTAGCTTTCAGCCCAACTCAACTCCTTCCAGGACAGCTTCTGCTAAGAAACCGAAGAAGGTAACCCCAAAGGG CAACTGGGTTATGGATGACGACTCCAAAAGTATGGCCAGTGTACAGTCAGACCGGTTCCGGAGGCACTCCATTGCTGGGT CATCAGTGAGAGATGATGAGAGCCTTGCTAGCTCTCCATCAGTTCCAAGTTATATGGTGCCGACTCAATCTGCAAAAGCT AAGTCCAGGACACAGAGTCCATTAGCCCCAGAAAATGGGAAAGCCGAAAAAGGGTCCTTTGGAACTGCAAAGAAGCGTCT TTCTTTCCCAGCTTCGCCTGCCAGACCAAGGCGTCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTGAATGCTGAGTTTC CTGTGAACAATGGTGTGGCCAGTTGATTATATAACCAGAGTAAGAGGATTGAAAGCATTAAAGTAGGATTGAAAATATCA CTAAAAACACAAAACATAAGTTTATTTGAATTGAGTGTTCTATTTATTTCTTTATCCTATTTTTTGTGTGTATCCTAATG TTTCACGGAGGCTCTTGATTTGGGGGTGAAAAATGTTTTGCTTACTATGTTTATCTATTTGCATCTTCATTTACCTTCTC ACCATTTGCCCAGAGGGGAAGAAATTTGGTTCATGGTGGTGTCATATGACAGAAGAACAAGTCAGCTGAAATTCAGAGTA CTTGATTCTAAATTACGATATAAATGTAAATTGATTTCATTGTCTCATTTCCTTGATGCTACTTTGTTCTGCTTTGAAAA TTTAAATTAAATACAGTTCACACTATATGGGCATGAGTAATCATGGACATCCGCATAGTTTGACACTCAACAAACCGGAT TGTAATATTTTTGGGTGTCTGCTGGGTGTCACATTGTGCAAATGTCCACGAATTATTGTATTGGCTTAGGTTCTGGTCCT TCTGGAGCACTTTTCATTTCTCATCCATGCAACTGATTAAATATTAAACAAGAAACAAATAATACCTTTTAAGTGTGGTT AGCACATCAAGTGCCAGCACACACTTCTATTTTATCTTTATATTGCTATTTTGTTCCCATTCTTGGGGTGGGGTTGCGGA TGGATAATGTTTCATCCACACCTATCTTTTGAGGTGGAGAGGTGGAATTGTGAGAGAGCTAGGAAGAAAAGAAAAAGTAA GAGAAAGAAAATATGAGATGTGATAGATGATAAAATGAGAGAGATAGAAATAAAAAGAGGTGGAAATAAAGTGTTTAAAA AATGAGGTGTGTATATATCATTACTCGTTACGGATACATATATATGGTAGTTGAAGTGGGGACTTCCAGCTCATATTAGT ATTGTGGCCAATCTCTTTATAATCTCGTTTTGCAAGAAGTTGATGAATCCCATTCTCTAGATTTTAGATATTCA
CDS sequence (LotjaGi1g1v0693500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCGGAAGGGAAATTGGTTTTCTACAGTGAAGAAAGCACTCAGCCCTGACTCAAAGGGGAAAAAAGATCAGAAATC AAGTCCATCAAAGAAGAAATGGTTCGGGAAGCAAAAATTGCTGACTTTAGACTCACACTCAGGAACTGATAAAGCACCAC CTCTGCCTCCACCAGAAGAGAATAAATTAAATGATATTGAAAATGCAAACAGTCACCATCATGTTGCTGAAGTTGTAACT TCCGCGGCTCCTGAGGAACCTGCTCCTTCTGCTCAGGCAGCAGTTGTTAGGATTGGAGCTGGTACAAATGCTCAGTTTGC CGGTAAGCCAAAGGATGAAGTGGCTGCAATCAAGATTCAAACAGCTTTTCGGGGACACTTGGCAAGAAGAGCATTGAGAG CTTTAAGAGGGTTGGTCAGGTTGAAAACGTTGATGGAAGGGCCCGTTGTAAAACGCCAAGCCATAAGTACTCTCCGCTCT ATGCAGACGTTAGCTCGCGTGCAATCTCAAATTCGTTCTAGGAGGGTCAGAATGTTAGAGGAGAATCAGGCTCTGCAGAG ACAAATCTTACAAAAGCATGCAAGAGAGCTTGAGAGCATGCGGATTGGAGAGGAATGGGATGATAGCCTGCAGTCAAAAG AGCAAATCGAAGCCAAATTGCTACACAAGTATGAGGCTGCTACGAGAAGAGAAAGAGCAATGGCTTATGCATTCACTCAT CAGCAAAATTGGAAGAACTCATCTAGATCTACAAACCCAATGTTCATGGATCCAACCAATCCTACCTGGGGATGGAGCTG GTTGGAAAGATGGATGGCAGCCCGGTCCTACGAGAGTCGTAACCTTATGGATAAAGAGCTGAATGATCATTCATCTGTAA GAAGTTCTAGCCGCAGCATTACTGGTGGAGAAATCAACAGATCATTTGCTCGTTTCCAGCTCAATTCTGAAATCCATTCT CCAGCAGCCAGCCAAAATGCAGGCTCACCTAGCTTTCAGCCCAACTCAACTCCTTCCAGGACAGCTTCTGCTAAGAAACC GAAGAAGGTAACCCCAAAGGGCAACTGGGTTATGGATGACGACTCCAAAAGTATGGCCAGTGTACAGTCAGACCGGTTCC GGAGGCACTCCATTGCTGGGTCATCAGTGAGAGATGATGAGAGCCTTGCTAGCTCTCCATCAGTTCCAAGTTATATGGTG CCGACTCAATCTGCAAAAGCTAAGTCCAGGACACAGAGTCCATTAGCCCCAGAAAATGGGAAAGCCGAAAAAGGGTCCTT TGGAACTGCAAAGAAGCGTCTTTCTTTCCCAGCTTCGCCTGCCAGACCAAGGCGTCATTCAGGTCCACCAAAGGTAGAAA GCAGCTTGAATGCTGAGTTTCCTGTGAACAATGGTGTGGCCAGTTGA
Protein sequence (LotjaGi1g1v0693500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRKGNWFSTVKKALSPDSKGKKDQKSSPSKKKWFGKQKLLTLDSHSGTDKAPPLPPPEENKLNDIENANSHHHVAEVVT SAAPEEPAPSAQAAVVRIGAGTNAQFAGKPKDEVAAIKIQTAFRGHLARRALRALRGLVRLKTLMEGPVVKRQAISTLRS MQTLARVQSQIRSRRVRMLEENQALQRQILQKHARELESMRIGEEWDDSLQSKEQIEAKLLHKYEAATRRERAMAYAFTH QQNWKNSSRSTNPMFMDPTNPTWGWSWLERWMAARSYESRNLMDKELNDHSSVRSSSRSITGGEINRSFARFQLNSEIHS PAASQNAGSPSFQPNSTPSRTASAKKPKKVTPKGNWVMDDDSKSMASVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMV PTQSAKAKSRTQSPLAPENGKAEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSLNAEFPVNNGVAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 65 | 65 | - | – | |
| PANTHER | 3 | 459 | 457 | 2.1E-171 | – | |
| PANTHER | 3 | 459 | 457 | 2.1E-171 | – | |
| MobiDBLite | 16 | 31 | 16 | - | – | |
| SMART | 111 | 133 | 23 | 3.0E-4 | ||
| ProSiteProfiles | 112 | 140 | 29 | 10.786 | ||
| Pfam | 115 | 133 | 19 | 5.8E-6 | ||
| MobiDBLite | 321 | 468 | 148 | - | – | |
| MobiDBLite | 321 | 344 | 24 | - | – | |
| Pfam | 382 | 448 | 67 | 2.8E-5 | ||
| MobiDBLite | 384 | 416 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0693500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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