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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0695500 |
| Transcript ID | LotjaGi1g1v0695500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | H+-transporting two-sector ATPase, alpha/beta subunit, central region, related; TAIR: ATMG00120.1 reverse transcriptase zinc-binding protein (ChrM); Swiss-Prot: sp|P93281|M120_ARATH Uncharacterized mitochondrial protein AtMg00120; TrEMBL-Plants: tr|A0A151SMH7|A0A151SMH7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0695500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126309347..126310384) extracted from Lotus japonicus Gifu genome v1.2.
CCTATTCTAACTAACAACTAGTCAACTAGCTTTTAACTTCAATTATTCCAATACATATCATAAGCATAAAAGTTAAATGA AATATAACAATCTTATATATTGTTTTGAGATTATACCATACATAAAAGCGCCCTCTAATTCGAGAGCACTTGCTTGGAGG GTCCTCCTTAATAAAGTGCAAACTAAAGTTGAATTGGTTAGAAGAAATGCCATCCCGACTAATTCTGGGATCTCATGTGG ATTGTGTCTATTGGAGGATGAATCAGTATCTCACCTCTTTTTCTCCTGCTCAATAGCTTGGAAGGTTTGGATGAAATTAT GTAGATGGCTTGGGGTAAGTACTGTTTTACCGATGAATGTCAGAGCTCACTTTCTCCATTTTGGTTTCATCTTAGGGGCA GGGAAGAATATGAAATGTGTATCAACTCTGCTGTGGATTGCTGCAATATCCTCTTTATGGTTTTATCGTAACAAAGCAAT TTTTGAAGGTGGTGTGGTGGACGTTGAAAAAATTACAGAACTGATACAATTTAAAGTTTGGCTATGGCTTAAAGCTAAGG GGAGGAATTTCCAGGCCTCTTCTTCAGATTGGATTCTGAATCCTATTTGTTGTATTACAGCTTTGTGACTGCTATTCTGT GGGGACGTTTGATATTGCTTGAATCCCTTGTCTTTTTGGTACTGTTACTGGCTTAATATTCTTAGGCTTGGAGCTGTTGC TATATTATGGTGGAGCTAGGTTGATTTGTTGGGGTGATACCATGCCTTGTTTTTACTAGCTGCTTTGTTGGTGTAAATGA ATCTTTGCTTGATATAGTTGAAGCTGTACTGCTAAACTGGCTTCGGGTGGTAGTGCTATGGATTTATTTTCATTCAGTTT CAATTAGTGGGTGGGTTTTGTAATTTCTCCTTGGAGGTATTGTTATGGCCTTCTAAAATATGTACTCTTTTTCCTTTTCC AGGTTTTTCCCAAGGGGGTTTTCCTGGAAAGGTTTTAATGAGGCATATTTTATTATGCTGTGCTTTCAAGGAGGAGGG
CDS sequence (LotjaGi1g1v0695500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATATAACAATCTTATATATTGTTTTGAGATTATACCATACATAAAAGCGCCCTCTAATTCGAGAGCACTTGCTTG GAGGGTCCTCCTTAATAAAGTGCAAACTAAAGTTGAATTGGTTAGAAGAAATGCCATCCCGACTAATTCTGGGATCTCAT GTGGATTGTGTCTATTGGAGGATGAATCAGTATCTCACCTCTTTTTCTCCTGCTCAATAGCTTGGAAGGTTTGGATGAAA TTATGTAGATGGCTTGGGGTAAGTACTGTTTTACCGATGAATGTCAGAGCTCACTTTCTCCATTTTGGTTTCATCTTAGG GGCAGGGAAGAATATGAAATGTGTATCAACTCTGCTGTGGATTGCTGCAATATCCTCTTTATGGTTTTATCGTAACAAAG CAATTTTTGAAGGTGGTGTGGTGGACGTTGAAAAAATTACAGAACTGATACAATTTAAAGTTTGGCTATGGCTTAAAGCT AAGGGGAGGAATTTCCAGGCCTCTTCTTCAGATTGGATTCTGAATCCTATTTGTTGTATTACAGCTTTGTGA
Protein sequence (LotjaGi1g1v0695500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKYNNLIYCFEIIPYIKAPSNSRALAWRVLLNKVQTKVELVRRNAIPTNSGISCGLCLLEDESVSHLFFSCSIAWKVWMK LCRWLGVSTVLPMNVRAHFLHFGFILGAGKNMKCVSTLLWIAAISSLWFYRNKAIFEGGVVDVEKITELIQFKVWLWLKA KGRNFQASSSDWILNPICCITAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 16 | 78 | 63 | 3.2E-12 | ||
| PANTHER | 25 | 179 | 155 | 8.4E-25 | – | |
| PANTHER | 25 | 179 | 155 | 8.4E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0695500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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