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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0698100 |
| Transcript ID | LotjaGi1g1v0698100.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT2G37460.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460; TrEMBL-Plants: tr|I3SAH1|I3SAH1_LOTJA WAT1-related protein; Found in the gene: LotjaGi1g1v0698100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126593742..126598625) extracted from Lotus japonicus Gifu genome v1.2.
AATTTTCTACTACTACACTTCTGCTTCTCCAAGAGGCATCAAAAGGAAAACAAAACAAGTGAATGATATTATAAAATCTA TTCCATGATGAGTAAACATTCAACTAGGCAAAAGGTGATAATCATTGAAAGCAGACACCGGCCTTACTGAGTATGTTGAT TACTGGGACTCCCCACTTGGTTATGTAAAATAGTTGAGCTCCACTATGTATAGGTATATTGCACTATAATATTCTACTGA ATTTTGAGCACTTGTTTACTAAATACCTCACCTTCTTATTTATAGAAATGAGAATTTAGTAAATTGGTTATTTTGTTCCA ATTAGCTGAAACGAGATGGAAGGTTATAGTCCAAAATGGTTTCATAAAGCCAAGCCATTCATATGTGTCGTGTTCATTCA ATCTGGATATGCAGGTATGGATGTTCTGTGCAAGGCTGCATTGAACAATGGAATGAGCAATTATGTTCTTGTTGTCTACC GTCATGTTGTTGCCTTTGTTGTCATGGCTCCTTTTGCATTGATCTTGGACAAGTATGTATCTCTCTTCCATGTGTGTGTG ATAGCTTTTATTTCTTCAGAATCAATTACAGAACTCAAAAAGCTATGTATTCACAAAAGTTTCACACACATGTTTAGATC AGTTCTTCTTTAATTTCATCAGAATCAATTCTGAAATGCTTCTCACAAAAAAAGCTGCTGTGCAGAATTGACTCTGGCTT CCGAATCAATTGTAGAATAGTTCCCGAACAGTAGAATGATTTCCAAATATTAACTGACCTGATGCTACATTCTCTTAACA GGAACATAAGGCCAAAGATGACATTTTCAATCTTTGTGAAGATAGTGGCACTGAGCTTGTTAGAGTAATAATTAATTTCT TACATGACTAAGCTAAACATATTCTTCTATCCTGTGGAAAAATCTTGCTTAACATAGATCTTGCTCTGATATGGCAGGCC AGTTATTGCTCAGAATCTGTATTTTTTGGGAATGAAGTACACAACAGCAACCTTTGCAGTTTCCATGTACAATATCCTTC CTGCCATCACTTTCCTCATGGCTTACATTCTTAAGTACTGTTTCCATTCCCTACAATTTAAGAATATTTCAAATTTGATA ATAAAGCTAAACAGAACATGGCTCAATAATGAGGATTATTAAATAAGTGTACATAACATTTTTTAATACATATTGTTACT AAAAATAATGTACGACTCATCTCTTATTAACTTGGTTTAGGAGGTGTAAATAAGCGTGACTGTTATGAAAAAAACATGGC CGCGTTCCGTTTTAAAAACCTCCAAAACCTTAATGTCGTGGCCGAAATCACATTCATGAATGTTGATTTAAAACCATGCT TGTAATCAAAAGAGTTTCTTGTGCCATTTGTACTCAATTTATTAGAAATTTAATTTAAGCATTTTATTTTCAGGCTTGAG AAGATAAAAATAAAAAGTATACGTAGTCAAGCAAAGGTGTTTGGAACTTTAGCCACGGTTGCAGGTGCCATGGGGATGAC ACTAATAAAAGGTCCTGAACTTGAGCTTTTTGGGACTCATGGAGAAAGCAATACCCACATCCAGCATAATGGTGGGGTAA ATCTTCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCCTTGGTGGTGCAGGTTTCATGATTCTCCAAGTG AGTTTTTCATCTATGAGAAAAGATAAAATTTAATTAGTGCTATAAAACTCCTGTTATTTGCGGGATCTAGACATAATTTA GATATATTTTTACGAATTAAATGTAGGTAAATTTTGCATTTTTGCAAGAGACTAATATCATAATTGATAATTTAAATTTG TGACCGCAAAGTCACCAGCAACATTACTGTTGCATTGAGACTAGAGATTGAGTTTTTCATCTATCCAAATAAATAATTTT TCTCTTAATTTGATGGGTTACCCTAATCTGATATAGTTTCATCTTTTTCTCTAGGCTATTACCCTTGAAGCCTACCCTGC TGATCTCTCTCTCACAGCATGGATATGTTTGTTGGGAGCAATTGAAGGTGGCATAGTGGGCCTGGTCATGGAAAGGGGTA ACCCTGCTCCAGTTTGGTCTTTGAATGAGGATACAAAATTGTTGGCTGCTGTCTACAGTGTAAGTTTTTTAATGTTATAC TCCGATACAGTTCTTGACCAGCCATAAAATTAACAAATTCACATTTACAATCGATAGAGTTTAAAAAGATGATCAAAAAA GTCATTAGAAGCAACAATGAAATCCAAAGGCATAAAAAATATACTAAAACGTAAAACAAATTTAGGAGGTCACTACACAC ACGGGACATAAATTATACTCTGCTTCTTCATTAGTTTTTTTTTTTTTTTTTTAAATAAGTAACATGATTCATCCGCACAC AAATTTTTTCCATTTCATTTCCACCTAATTTTACTTCTATTTTTCTCTCCATTTTATTTTCTATTTTATTATTGTATTAT ATTTCATTCTTTCTATTTCTTATTTCTCTTATTCATCCACCTCTTTTCCACTTAAAATGAGGTGGTTAAACAAAAGTATA AATACCACCATATTAGCATCTTCCCTCTCAATATTTCAAGTTTATATGAATAAAAGATAAAAGAGCTTGCTGTGTTTGAA AAAACTTAGCTTATATTATAAGCATTTAAATAAGTGTACGTCTGAGTGAACTAATAAAAACAGTTTATAAGTTATAAACT TATAAATTAGTTGTCTAAATGACTGATGAGAAATTTTGAGTTAAATAAGTCATCGTCCAATCACATTGGAAATAAGTGAG TTGAAATTTAAATATTTTATTTATTCATTTATTTATAAAAAAAATCTTATTGATTCATTAAGTTGGGGTTAGTAACCCAA TGGGTCATTTAGACATCCCTCATTCTTTTGAGCTTATTTTTATAAGTTTCTTCAAATAAACACTTTTTTTAATGTAGTTC TCAACTTATTTTAATAAGTTTTTGAAATATGCTTATGAATAATTAAGCACTTCGTAAGAAGTACTTACTGTAAATACTTA AGCTGTTTGCCGTGAATATGTACATGTATAATAACTATGTTCTTCCTCTATAAATTTCTAAAATTTATTTGCAGGGCATA GTTTGCTCAGGAATGGCTTATTACATCCAAGGAGCAGTGATGAAATACAAAGGCCCAGTCTTTGTAACAGCATTCAATCC TCTATGCATGGTCATTGTGGCTATATTGGGCTCTTTTTGTTTGGCTGAGCAAATGTATCTTGGAAGGTAATTATAAACAT CGAGTCCAACCAATAAATCACATGTTCTTGTTTAGTGTTTTTATCACTGTTCAACTAATAAAATTGTATGTTGACCCAAA AAAAAAAAACTAATAAAATTGTATCATGTCATTTAATTGATATTGTACAATTTTATTGGTGGGGCAGAGAATGAGACGCA AACGAAGTCATAAAATCTTGATCCCTACAACATATGTCTAAAGACCTCAATCAAAAAACAAATTTATGAAAAAGTTGAAC TCACGTATATATCTTGTGCTAAATTTTACAGGGTGATTGGAGCCATTGTCATTCTTTTAGGGTTGTATCTAGTGGTGTGG GGTAAAAATAAAGATTATGACTCACCACCAAGTCCAATTATTAACGAGCATGTATTGCCAGATAAGCAAACTACAGAGAG CAATGCCAAGGACAAGGAGAAGCCTTCTAATCACGAGCTTATCACTATTAGTAACATTGGTGCAGGAAACTTAGCTCAAT ATGAACAAGTATGAAGGGATACACTAAATTAAATCCAAAAAATTTAGTTAACCTATGATGTTCTACTTTCAGTCAACCAA TCCAAATGCCATTTAACAATCTCAACTATATATAGACTCCTAGGTAATTGTTCGACCTTTCGATTATTGATATAATAGTC AAGGTTTTTGATGTAACAATATAGCATGTCAGAATATGACAACAAAATACCATCAAAGAAAGAAGAAGCAATAACTTTGA GTCAGAAAAAAAACATTAAGTTAGTTTTAAGTTGTCACGACCTGAAATCCTAAGTCGTGACCGGCGCACAGACTAACACT CTAGTCTGGCAAGCCTGTTTCTCACAAAAATCATTTCCCAAATTATTCTCTAAATTTACATATGTATCCCTATATTTATA AAAATAAATATACAAGATCTCATCTGTATTACCAATATCTCAAATGACAAAACCTGTCAAATAATGATCTCCATTTTCAT ACTTCCATAAAAAGGAAATTCTCAAATTAAGCACTCATGTGCAACTTTTACAATAAAACAATAAATAACAATCTCAAATC TAAATCCTCCTAAGACTCCCTATAGCTGCAGATAACTAGAATCAAATAGAAGACACCAATATGTCAACCTGTCAAATGGT CTGAATTTGACAACAGTATGCAGTTGCCTGAAAATCTGTGAATGGAAATAATGAATGGGGTAAGTCACAAAGACTTAGTG AGGATTTAACAACCACCATGAACAGGAAAGGGGAAACAAATGAAGCACGAGTTTTTCACTATCAGTTCAGAGTGTATAAT ATATATAAAATTAATAAGAATCATTTCAAATAAGAGATGATTAAACTGCCAAAGTTTATAAATAATCATTTCAATGAAAC TGAATAAAAATCATGTCAATCATATGAAAGCATTTAAAAATCAGCAATATAATTTAATAGGGTCACACATGTAGAACCGT GAGGCGGCTCCATCTCGTTGATAGCCCTCTCCTCCTAAGGGATGACCTATCCGATAGGGGCGGCTCCATCTAACGGATAG CACTTTCGTCTCTCGTATCACATGTCGTATCGTATCATCGGGGGAAGCTACATCTCGTTGATAGCCCTCTCCGTGCACTG GCGG
CDS sequence (LotjaGi1g1v0698100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGTTCTGTGCAAGGCTGCATTGAACAATGGAATGAGCAATTATGTTCTTGTTGTCTACCGTCATGTTGTTGCCTT TGTTGTCATGGCTCCTTTTGCATTGATCTTGGACAAGAACATAAGGCCAAAGATGACATTTTCAATCTTTGTGAAGATAG TGGCACTGAGCTTGTTAGAGCCAGTTATTGCTCAGAATCTGTATTTTTTGGGAATGAAGTACACAACAGCAACCTTTGCA GTTTCCATGTACAATATCCTTCCTGCCATCACTTTCCTCATGGCTTACATTCTTAAGCTTGAGAAGATAAAAATAAAAAG TATACGTAGTCAAGCAAAGGTGTTTGGAACTTTAGCCACGGTTGCAGGTGCCATGGGGATGACACTAATAAAAGGTCCTG AACTTGAGCTTTTTGGGACTCATGGAGAAAGCAATACCCACATCCAGCATAATGGTGGGGTAAATCTTCAACATGCAATA AAGGGATCAGTGATGATCACAATTGGCTGCCTTGGTGGTGCAGGTTTCATGATTCTCCAAGCTATTACCCTTGAAGCCTA CCCTGCTGATCTCTCTCTCACAGCATGGATATGTTTGTTGGGAGCAATTGAAGGTGGCATAGTGGGCCTGGTCATGGAAA GGGGTAACCCTGCTCCAGTTTGGTCTTTGAATGAGGATACAAAATTGTTGGCTGCTGTCTACAGTGGCATAGTTTGCTCA GGAATGGCTTATTACATCCAAGGAGCAGTGATGAAATACAAAGGCCCAGTCTTTGTAACAGCATTCAATCCTCTATGCAT GGTCATTGTGGCTATATTGGGCTCTTTTTGTTTGGCTGAGCAAATGTATCTTGGAAGGGTGATTGGAGCCATTGTCATTC TTTTAGGGTTGTATCTAGTGGTGTGGGGTAAAAATAAAGATTATGACTCACCACCAAGTCCAATTATTAACGAGCATGTA TTGCCAGATAAGCAAACTACAGAGAGCAATGCCAAGGACAAGGAGAAGCCTTCTAATCACGAGCTTATCACTATTAGTAA CATTGGTGCAGGAAACTTAGCTCAATATGAACAAGTATGA
Protein sequence (LotjaGi1g1v0698100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVLCKAALNNGMSNYVLVVYRHVVAFVVMAPFALILDKNIRPKMTFSIFVKIVALSLLEPVIAQNLYFLGMKYTTATFA VSMYNILPAITFLMAYILKLEKIKIKSIRSQAKVFGTLATVAGAMGMTLIKGPELELFGTHGESNTHIQHNGGVNLQHAI KGSVMITIGCLGGAGFMILQAITLEAYPADLSLTAWICLLGAIEGGIVGLVMERGNPAPVWSLNEDTKLLAAVYSGIVCS GMAYYIQGAVMKYKGPVFVTAFNPLCMVIVAILGSFCLAEQMYLGRVIGAIVILLGLYLVVWGKNKDYDSPPSPIINEHV LPDKQTTESNAKDKEKPSNHELITISNIGAGNLAQYEQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 326 | 326 | 1.3E-162 | ||
| PANTHER | 1 | 326 | 326 | 1.3E-162 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Pfam | 4 | 108 | 105 | 5.5E-12 | ||
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 20 | 37 | 18 | - | – | |
| SUPERFAMILY | 21 | 128 | 108 | 1.11E-7 | – | |
| Phobius | 38 | 48 | 11 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 49 | 71 | 23 | - | – | |
| Phobius | 72 | 76 | 5 | - | – | |
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 77 | 98 | 22 | - | – | |
| Phobius | 99 | 109 | 11 | - | – | |
| Phobius | 110 | 130 | 21 | - | – | |
| Phobius | 131 | 158 | 28 | - | – | |
| Phobius | 159 | 179 | 21 | - | – | |
| Pfam | 164 | 301 | 138 | 9.0E-12 | ||
| TMHMM | 164 | 183 | 20 | - | – | |
| Phobius | 180 | 190 | 11 | - | – | |
| Phobius | 191 | 211 | 21 | - | – | |
| TMHMM | 193 | 212 | 20 | - | – | |
| Phobius | 212 | 230 | 19 | - | – | |
| SUPERFAMILY | 225 | 306 | 82 | 7.45E-11 | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 231 | 250 | 20 | - | – | |
| Phobius | 251 | 256 | 6 | - | – | |
| TMHMM | 256 | 278 | 23 | - | – | |
| Phobius | 257 | 276 | 20 | - | – | |
| Phobius | 277 | 281 | 5 | - | – | |
| Phobius | 282 | 301 | 20 | - | – | |
| TMHMM | 283 | 302 | 20 | - | – | |
| Phobius | 302 | 359 | 58 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0698100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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