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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0701100 |
| Transcript ID | LotjaGi1g1v0701100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat, ribonuclease inhibitor subtype; TAIR: AT2G20210.1 RNI-like superfamily protein; Swiss-Prot: sp|Q7RTR2|NLRC3_HUMAN Protein NLRC3; TrEMBL-Plants: tr|I1N9Y2|I1N9Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0701100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126919014..126926264) extracted from Lotus japonicus Gifu genome v1.2.
AACACCCTTTATTTGGAGGAGTATTCATCAATCAAGCTTAGTCGGGTTACCAAGAAGGTCACATTTTGAAGGGTTGGAAG TGGTAGGGTCTAGGGATATGAGAATATGGAAGGATAATTAGCTGGCCAAGTCAACATGGTTTCAAAGTTTGAAACGGCGT CGTTATTTTGGGGATGGGTCATGAAAACTGAAAAGAGAAGGTTTGCATAGAAGTTACTCATCTCTTTGAATATTCATTTG TAGTCCCTTCCACCACAGAAGCGCGGCACTGCTCCGTTGCAATGGCGGAGCCTCCTCCTTCTCTGACCTCTCTCTGCATC GACGCCATCACTCAAGAACTCATCGCCGGTACATATTACAATCACGCTTCCCTTTTCTCTGTATATATACACAATTGGAG ATTGTACAAGTGTTTGTGGAACTGAAACCTAGAGTTTGAAACGCTTGCAGGAGATGACGCTCTTCTTCTTCTTCAAACTA TATACGACTTTCCATTACATTTGCTTGATACCCTAATCACACGTTTGCCCCCTTTGGCTTTGCACAAATTCCACCACCAC CTGTATGTTCATTTCTTAGCTCCAACATTTTCCTTTTTCTGAATTTTCAATGTTGTGTTTGTTAACTCTTAAGTTCTGAG GGTGTGAATTGTGAAAATATACTATTGATTGTTGAATGTTTTTGAATTTTAAGCACTAGCTCTGTGTGTTCTTGTATTTT GTGTTGCACTATGTAGTGTTGTGTACTCTGTAGATAGCAGGATAGAGTTTCTTAGTGGTATGGTTAATGCTTTAGTTTTT AGGTCTTAAGACTCTTAGCAGCTTCTATTTCCTTTATGCTCACTTGGTTTCTTACCTTGGTTTGGTCATTATGATGTTAT TGTTGGAATAGACCATTTCAGGACGAGGATGAGGAGGGTTTTTTGCGCGAAGACTCGACAAAGAAGAGAAAACGTGCAAG GTTGTGAATAATTTTATGCGATTGTTTTTTGCAAATGCATTCTAGTGGTATCTTTGTTGGTTATAAGTGTGCGGGGGAAT CTTGTTGTTTCAGGGATTGGAATCTAAATGCAGCTTGGCGGAACTTGTTTAAGTTACGATGGCCTGATCTCATTAATCAA ATCCAACCAACTGATTGGCAACAAGCTTACTGGGAAACCCATTTGCAAAAGTATATAAACTTTAAAGTGTTATGTTATTT TCATCACTTGATATTGGTTTCACCTGAAATTGACATTTTTCTATAACCTAAATGAAATAACAGTTGTCTGGATGAAGCAG CAGAGATAGCCCTAATCCCATCTTTTAATGGATCTATTGGTGACATACAGATTTCAGGTATTACGATGATTTTTTATCTC CTTGATGAGTTTTCTATGTGAAGTTTCCCTCTAATTCTAGATTAAGCAATAAATTTGAAAGTGGTTATGAAATAGTTCAA AATTTCTCCTCAAATGAGACTTTGAAGCATATAGATACTTTCTTAGACTTTGACATATTGAAGGAAGTCCAGGATGCCTT TGGCTGAAGAAAAAAAATGAATGAGCAATATTGATGATTGAAAGTTTTTTGAATTGCTTGGTTACCTTTGAAGCACCATA TGACGCTTTAAAGCTTTTGCGAAAAAAAAAAGAGTTGTCTTTTACATCAATCATATTCATAATATCTGTATACTTCAGGT TCCCTCAACTTTGTGTACTAATAATCTTTTCAAGGCGGCAGGCGCACAACCCACTTCATCCCCTTTTCTATCCTTTTTTG GTCATTCATAATTTATTGAATTTGTTTCACTTTTCCTCTCTTCTTTTCAGATAGCACACTGAAATATATTGGATTTGTGG AATATACAAATCATTCAACTTGTGACCATTCAAAACTGTCTTATCACTGCCTACAATTTGGCAGCCATGTGAGGTAAGAT ATTAAATTGTTATCATCTTTCACAATATATATGGAAATGATCAGTTAGGATTGCCTTTTAATTATAAAGGAGAAAACCAT GGATTTATTTTTTGAGTTCTTGGATAAAATACTTCCTTTTCAATTGATGAAGCTCAATTGTTGAGTTGCTAGTTCAATCT TGATTTGATTATCAGTTGCAGCTTCACTTGACTAGTTAAATTGGGTTTTCTGTCAGTGTTGTCATGATGCAGAAAGTAGG ACGGCCGACCACCCTATAAACAGTATCATTTTATGCCGTGGGGCAATGTGGTCACATTATTGTAGTGATATATTTTAAAA AACTTAAATTACTCGTCATGACAAATCATAAATGAAATACAATTTAAATGTAAATGAAGTCATACCAATACTTTGAAAAC ATAATGTCATCCAAATTGACTAGGAACATAATGTAAGTACACATCCAACCAAAATGCAAGTCAAGAGGCAAAGAAGACAT ACTGAAATTATTCGGGAATATAGGGTGATATGACTGATATCATAGACCAACTCTGTTAAAAGCACAAGCTGTTAGATGAA GGCTCACCAATTATTTTATATCTAACCAGTATTATTAACCCTGGACAGTGGCTAGTAACGGCTGACCTAAAAATGCTATA GCCCATAGAGTGACTGACTGACTATGTAAAGCACTTGTTTTTGAAGAATGAAAATAGAGCTATGCAATAATCAAATAGGA CGCATTAGGTAACACTTCTTTAGTTCCTTTTCATTTAATAGAAGATATCTAACTTCTTAGCTTCTATGATAAGAATTGGA GAAAATGAAATGCACAAAAGAAAAGAAAAAACTAACAAGGTACTTAATTGTATGATCCGTATCGGTGATACATAATTTCA CTTACTCATTCATGTATCACATGATTTTAAGCCATCTATTATTCATCGATATATGAATCGCAGGCTTGCCAAATCATATG GAATTGTGCAATTCTAACAACTATGATAAACTACTACGTGTTGTCTTGAGCAATTCTTTCACTTCTTATATAACTTTTTC TTGATGCAGTTGTCTGAGACTGCAAAACGTACTATTTACAGCCGAAATTAGTGTAAGTTGCGCTTTCTAGAATAATATGA GGAACTCCTTGATTAATTCCTGATTTTATTTTCATCTGGTCAAATGCATCTGTAGCTTTCACAACCTTACAGAAAGCAGT GTCTGTTACCAGTATATATATTTTAAGATGCATAATCCAAATATTGTGATTGTCGGCACACTCATAATTGACAAATTCAG TTTAGGTTCTTCCTATAGGTCATTTTTATAACAACTGGTGTTGTTTGCTATATTATCGAAGCATTTGATAACATTTCATG TTTAGTACTTTCATTATTTTAAGTCAATTCTTTTTTTAAATTTTCTTATTGGAATATTTGAAATACTGCAAGCTAGTTTT ATGAGAATGATGTCCAACATATAACTTGAGTTCTGTGATCTAATGCTCACAAGTCACAACAACTAACTGGGATTTGTGCA TTTTGAATGTCAATAAAAGGAAAGGAGACGGAATAAAAAAAAATTCCCTTCTGTTTGAAAATATCCATTATTTCTACATG TTATTATTTACAGCTTGCAGTTCAAGACATGTATCATATGATGTTTTCCTAAATTTCAGCTCTTCAATGCTTTAAAACCA GGTAACATGGTATGTTGTCATGTACTTTCACTTGCAGGGTCTGTTGAGGGAATGCAAGCTGCAGAGTCTGGTGCTAAGAT GGATCAGATACAAGGAACAAGTAAGCCTCCTAACTCCTATAAATATATAATCAATATTCTTTGATATATTTTGTACTTGT GTGTGTGCATGATGTATCTGCAAAGGGGAGAGTTTTTAAGTTTCACATTCATACCTTGGTGAAGCACCTTCTGGATTAAT GTGTTATAATATCTTTTACTTTTGCAAATATGATTTATTATATCTATATTTTTTTCAAAGTTTAAAATACCTCACCATGT TGATGGTTCATATGCACTGTTTCACAGGTTGATGAAGTATGCAAACTTCTCACTCAACATAGTGGAACATTAACATCGCT GGAATTTGTTCACTGTTATGTCGACACAGATTTTATTAATGCAATATTTGGTTCTCTAGTCATAAAGGGTGTACAAAAAC ATGGGATTCAACACTTATCAATCATCGCTTCAAGTTTTTTGGAACCATGCACAGTTTCTTTACCTAATGGGTTTGAGTCA TTTTTGTCTTCAGGAAGGTACACGAGCATACATTTACCTTTTTCATTGTTTTTTGTATGACTATTAGCAACTTCATTTAT ATTATATGGTTTTATTGAGGTTTGACATTTCCTGAGTAATCAGAACTACTTCAAGACTTTAATGTGATCTTAATATAACT GGAAAATGGCTGATGCATCAGCTATTTCTCAAAGAATGCTATGTATATTTGTTTCTCCAGTTTTTTGTGGTGGCTAGCAA TGGGTGGTGGAGTGGGGATTATGTTTATATATAGCATTAGCATCTGCTTGAATGTAATATCACAACAATAATATGATTAC GCAATACATCTAATATTTTACTTAATCATTTGTGACAGTTTTCTTAATATCTAGTTATGCTATTTGCTGTGTTTTACTTG TACATATAACTAGATCATAACTTTTCTGTCTGTTAAGTGATTACCTTCTTTCATGCTGATGCTGTTGCTAGGTCCCTGTG CTCAATAAGACTCTCTGACAACCACCATGGACGGACTTTTGCCAAAGCACTTTTTATGACTCTTCTCAATCTTTCCTCTA CAATATCTGTCCTTGACCTTTCTGAGAATAGAGTAAGTTATTCATCTGCATAATATGCTTTCTGTATTCTCTTATTAATA AGCTAACATAAAGTTCCGCACATACTCTTCAAGATAGCAGGATGGCTTTCTGACTTTAACAGGAGACTCTCAAGTGGTTC ACATGCATGTGTTGAAATTGGAAAGTCCTTGCAACAGTTGCGTGTACTCAACCTAAGGTAGCATCATGCTAAAGTATTTT ATATTTTCTGAGTGATAGGAGAACTCATTTATGTGTTGACTTATGTTGGCTGTGATGGGTGATTGGAACTGTGCAGGAAA TATATGAGAAAGCTACTCTTTAACTTACTATATATTGCTTCTGGTACATATTGGTCTATAGTGTCTTGATATCATCTTTT TATGAGTTAGTCTTAATAGGAGCTGCTGTAAAACTGTTGATAAGCTTGTTGCATTTTTCCAGTTTAGTCAGTATTTGATG AGCAGTGAGATTTTTAATATGGTTATAGTCTCATAGGGGAAACAATTTACGGAAAGATGATGCAGAAAGTCTTAGGTATG CTCTTGCACACATGCCTAACTTGGAGGACCTGGATATAAGTGACAATTTAATTGAGGATGAAGGAATCAGGTCAATTGCA TTTCCACTTTCTAGGCATATTTTGAAGATATGAAATTGCAGTAGTGTCTAATTATCTATCATCGAACTTACAGGAATTTA ATTCCCTCTTTTTTGGGAACATCTGAAACGGGTTCTCGCATTTCTTGCTTGAAAGTAGAGAATTGTGAGCTGTCCTGTGA TGGTGTGAATCATCTACTTTATGCCCTTTCTACCTCCAAAGCACCCTTGAAGACTCTTTCTGTTGCTGACAACTACCTTG GCAGGTTTTGTATGGATAGTAAAATCTTTTTTCATCATTCAATTTATCTCTCCATTTGTATTTTGATTAATTTTTCTTGT ATAGTCAAGTAGCTATAGCATTGGGAAAATTTTTGAGCACACCTATCGAACTACTTGACATTGGAGGCATTGGATTGGGT TCATTTGGTTTTCGAGATCTTCGAAATCTAATAAAGGAGCAGCTTAAGCTGGTGAAAATCAATATTAGGTTAAGAGCCTT AACATTCTGCCATTGCTTTATGTTTACTGTGGGACATACAGTCAAGTTACACCTTCCTATTTGTGCAGCGAAAACCGCGG CGGGATTGAAACTGCTGAGTTTCTGTCAAAACTCTTGTCTCAGGCTCCACAACTAATTGAAGTGAATGCAGCAAGTAATC TTATGCCTATAGACTCACTGTCCATCATCTGCTCTGCATTAAAAATTGCAAAAGGTATTTATGTTGTTACTGTCTCTTCT ATTGATGACCCCTGTAGTCTCTTAGATGGTGTAACTTTGTGATTACTAAATTCATTAAGCAGGCCCAGTAAACTCCCATT TGTAGTTGCTTGGAGACCAGTAGTATCATATAATAGTCCCAATAAGCAACTAATTTCAACTATATTCTAGCTCAACCTGG GTTTGTACTAGAACTGGGAGTACCTGTTATATGTGTTTTTGATTGGACAGAATTTGTAGAAACAATTTTAATCTAGATAA CTAAAATATGTATTTGAAAAATCAATAATTTGTTCAAATCTTGAGCTTCAGATTTAACTATGTTAAAGTTATCATGCTTT AGGTAATGTTCAGCATTTGGACTTGACGGGACATACATGGGACTATAAGCCAGAGCATGCTTCCCTACACGCTGAATTTG TACATGATGGAAAGCCTATATTGATTCTTCCATCACCATCAGCCGTTGCTGCTCCTCATGACCATGATCCTTAAAACACA TACATTTTTAGATAAATTATGTTGCACGGTATATGCAATCATTTTTTGTTTTTTTCTATTTCTTGATCATTATGTGTTTT AGCTCAGTTACATGCACAATACCTGCAAAAATATTATTGGTCCCTCCCAAGTCTTAATCTTTCACAGTACACCAAAGTTG GGCAAACGTCATCTCTGGACACTTTGATAGATTTCTCTTTACTATGTTTTCAAGCAATTGGATCTTGTAACCTCTATTAT ATGGTTGGTTTTACTACCTAATCTCCTTCATGATTTGTAATTTAAATGTAGCTGTAGTTCAATTGGTGCTGTGCAACGGG CATATACAATCTGTTGTATCAAATATAATGTATAGTTTTTTTTTTTTTTTATATGAACAGCTCCCGTAGTGTTTGGATAA TACACTGTTTATTTCTATTTGAATGATTACCCTCGTTGTATCAGTTCTGTTCCAAAGCATGTACCTGGTTTCTGATCTTT AGAGGCTGCTGTGTCCCCTTCTGGTTTTGGATTTCAGTTCAGTCCCTAAACTAGTTTGGAGAAAGCTGTAATAATGTCAG GCCTGGGTTTCAATCCATTTGCACTGGAATGTTAGTCATGACGCTTTTTAATACTTTTGAGGTGCTGCTTTACTTTTTGC GTGGTTTGTTAAAGTAAATCTTGCCTGTTTACACATGCTTGCATGTGAGCT
CDS sequence (LotjaGi1g1v0701100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAGCCTCCTCCTTCTCTGACCTCTCTCTGCATCGACGCCATCACTCAAGAACTCATCGCCGGAGATGACGCTCT TCTTCTTCTTCAAACTATATACGACTTTCCATTACATTTGCTTGATACCCTAATCACACGTTTGCCCCCTTTGGCTTTGC ACAAATTCCACCACCACCTACCATTTCAGGACGAGGATGAGGAGGGTTTTTTGCGCGAAGACTCGACAAAGAAGAGAAAA CGTGCAAGGGATTGGAATCTAAATGCAGCTTGGCGGAACTTGTTTAAGTTACGATGGCCTGATCTCATTAATCAAATCCA ACCAACTGATTGGCAACAAGCTTACTGGGAAACCCATTTGCAAAATTGTCTGGATGAAGCAGCAGAGATAGCCCTAATCC CATCTTTTAATGGATCTATTGGTGACATACAGATTTCAGATAGCACACTGAAATATATTGGATTTGTGGAATATACAAAT CATTCAACTTGTGACCATTCAAAACTGTCTTATCACTGCCTACAATTTGGCAGCCATGTGAGTTGTCTGAGACTGCAAAA CGTACTATTTACAGCCGAAATTAGTGGTCTGTTGAGGGAATGCAAGCTGCAGAGTCTGGTGCTAAGATGGATCAGATACA AGGAACAAGTTGATGAAGTATGCAAACTTCTCACTCAACATAGTGGAACATTAACATCGCTGGAATTTGTTCACTGTTAT GTCGACACAGATTTTATTAATGCAATATTTGGTTCTCTAGTCATAAAGGGTGTACAAAAACATGGGATTCAACACTTATC AATCATCGCTTCAAGTTTTTTGGAACCATGCACAGTTTCTTTACCTAATGGGTTTGAGTCATTTTTGTCTTCAGGAAGGT CCCTGTGCTCAATAAGACTCTCTGACAACCACCATGGACGGACTTTTGCCAAAGCACTTTTTATGACTCTTCTCAATCTT TCCTCTACAATATCTGTCCTTGACCTTTCTGAGAATAGAATAGCAGGATGGCTTTCTGACTTTAACAGGAGACTCTCAAG TGGTTCACATGCATGTGTTGAAATTGGAAAGTCCTTGCAACAGTTGCGTGTACTCAACCTAAGGGGAAACAATTTACGGA AAGATGATGCAGAAAGTCTTAGGTATGCTCTTGCACACATGCCTAACTTGGAGGACCTGGATATAAGTGACAATTTAATT GAGGATGAAGGAATCAGGAATTTAATTCCCTCTTTTTTGGGAACATCTGAAACGGGTTCTCGCATTTCTTGCTTGAAAGT AGAGAATTGTGAGCTGTCCTGTGATGGTGTGAATCATCTACTTTATGCCCTTTCTACCTCCAAAGCACCCTTGAAGACTC TTTCTGTTGCTGACAACTACCTTGGCAGTCAAGTAGCTATAGCATTGGGAAAATTTTTGAGCACACCTATCGAACTACTT GACATTGGAGGCATTGGATTGGGTTCATTTGGTTTTCGAGATCTTCGAAATCTAATAAAGGAGCAGCTTAAGCTGGTGAA AATCAATATTAGCGAAAACCGCGGCGGGATTGAAACTGCTGAGTTTCTGTCAAAACTCTTGTCTCAGGCTCCACAACTAA TTGAAGTGAATGCAGCAAGTAATCTTATGCCTATAGACTCACTGTCCATCATCTGCTCTGCATTAAAAATTGCAAAAGGT AATGTTCAGCATTTGGACTTGACGGGACATACATGGGACTATAAGCCAGAGCATGCTTCCCTACACGCTGAATTTGTACA TGATGGAAAGCCTATATTGATTCTTCCATCACCATCAGCCGTTGCTGCTCCTCATGACCATGATCCTTAA
Protein sequence (LotjaGi1g1v0701100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEPPPSLTSLCIDAITQELIAGDDALLLLQTIYDFPLHLLDTLITRLPPLALHKFHHHLPFQDEDEEGFLREDSTKKRK RARDWNLNAAWRNLFKLRWPDLINQIQPTDWQQAYWETHLQNCLDEAAEIALIPSFNGSIGDIQISDSTLKYIGFVEYTN HSTCDHSKLSYHCLQFGSHVSCLRLQNVLFTAEISGLLRECKLQSLVLRWIRYKEQVDEVCKLLTQHSGTLTSLEFVHCY VDTDFINAIFGSLVIKGVQKHGIQHLSIIASSFLEPCTVSLPNGFESFLSSGRSLCSIRLSDNHHGRTFAKALFMTLLNL SSTISVLDLSENRIAGWLSDFNRRLSSGSHACVEIGKSLQQLRVLNLRGNNLRKDDAESLRYALAHMPNLEDLDISDNLI EDEGIRNLIPSFLGTSETGSRISCLKVENCELSCDGVNHLLYALSTSKAPLKTLSVADNYLGSQVAIALGKFLSTPIELL DIGGIGLGSFGFRDLRNLIKEQLKLVKINISENRGGIETAEFLSKLLSQAPQLIEVNAASNLMPIDSLSIICSALKIAKG NVQHLDLTGHTWDYKPEHASLHAEFVHDGKPILILPSPSAVAAPHDHDP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 609 | 606 | 2.2E-264 | – | |
| Gene3D | 139 | 342 | 204 | 6.9E-10 | ||
| SUPERFAMILY | 162 | 575 | 414 | 6.8E-38 | – | |
| Gene3D | 343 | 581 | 239 | 1.1E-31 | ||
| SMART | 359 | 386 | 28 | 1.9 | – | |
| Pfam | 360 | 380 | 21 | 0.77 | ||
| SMART | 387 | 414 | 28 | 4.8 | – | |
| Pfam | 387 | 406 | 20 | 0.0092 | ||
| SMART | 419 | 446 | 28 | 38.0 | – | |
| SMART | 448 | 475 | 28 | 90.0 | – | |
| SMART | 502 | 529 | 28 | 130.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0701100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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