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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0709600 |
| Transcript ID | LotjaGi1g1v0709600.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein root uvb sensitive 6; TAIR: AT2G31190.1 root UVB sensitive protein (Protein of unknown function, DUF647); Swiss-Prot: sp|Q9SJX7|RUS2_ARATH Protein root UVB sensitive 2, chloroplastic; TrEMBL-Plants: tr|I3SPU8|I3SPU8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0709600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127778753..127785437) extracted from Lotus japonicus Gifu genome v1.2.
CTAGTGAGCCAAAATATCATCTAGTTCTATCAAAAATCTAAATTCCAAATCTTTACATTTTTAGTAGATAATAACAACCC ACACTTTCCTTTTTATTTATATAAAGTAACAGATTAAATCAGTTTTAAGTAGATGAAATTTACTTAATCATTGATTTAAA AAAATCAACAAAAATAGATTTTGCTTATTTTACTTGTTTTCAAGAATATTAAATCCAAAACTATATTTTTACAATAAATG TGACCGTCAGAATTCACTAAATGGCAAAAACACTTTTGTATGTTTTGTTTTAAAGAATGGTGAACAACTTTCAGACTCAC CATAGCATTCATCATTATCTCCATCTACTAATGACAAATATGAGAGTGATGGTTCGTCTCATTATTTACCATCAAATAAG CCTTCACTATACACCAATAGGTACAAAATAGGGTAGCAAGAGTATGTTTGCTCACAACAAGTTATGAAAATCTCTCTTAC ATAGCCCACAAAGTGTCTTTCAATCCTCAAGTAAGCATTTGTGTTTGAACAATGTACCTTAGTTAATAAAAGTTTATCTT ATTTAAATCCTTTGTCTAGGATTATAATAAGCGACTTGTAGCATGTCTTATAAAAGTTTGAAGGCTTAATTCCACTTTAG GCCCCTAATGTTTCGTAAATGTGCGATCTGCACCCCCTGTGTATAAAGCGTGCGGTCAAGGTCCCTGACGTTTCTAAAAC GTACGATTAACGCCCTTCCGTCCAAATCCGTTTGGTTCCTCACTTGACCAAACGGAAAATGCTGACGTGGCATTATTTAA TTAATTAAAAATTCATTTTTCAAATAAAATTATTTCAAAACATAAAAATAAAAATTATTTCAAAGCAAAAATTTATCCAG AAGCTTCTCTTCATCTTCAACCTCTAACTCATCTTCTTCAACTTCCCAACAAAAAACTCAAACCCAAATAAAATCCCCAA TCAACACCCAACCAACCTGCAACCTCCTCCCTCTCCCACCCACCTGCAATCACCACCCTAACCTCACCCCAATCAATCTG CAACCCTATTATCCATCATCTTCAACCTCCAGACCCCACCACCATCTTCAGCCTTCAGCCTCCAGGCCCCCACTCCCACG CCACCACCTCTCCAATGCCACCGCACTCTTCTTCTTCCATTTCACCACCGCACCACCACCCAAATCGCCCCTATAGCCTA TAGGGATCCAAATCACCCCTCTCAAAACCCCTTCCCTGCGAAACCCAGATGATCAAATCCAAGTTCAAGTTCCTAAATAT TTTAACTTAGATCTGGTGACAAAATCTCCCTTAGGTACCTGCGGTTTTTGAAGAATGAGGTGAGGGAAATCGAGATCTAG TGCGATCTGGTGTTACCGGTGTAGTGGCCATGACCGAATTTGATCTGCAAAGATTTGAAGGTGTGGTGCTCACGGTGGCT GTGGATGTTTGTTAGATCTGTGCTGGTTGTGTTTGTGAGTATGTGGTGTTATTTTTATCCTCTTTTCTTCAATTTTTCTC TTTCTCTTCTTTTGATGCCGTCCCACGAAGCTTCAAATACAAAGAAGAAGGAAAAAAATAACTTATGTCTACAAGAGAAA GAACCAGCACCGCCGCATGGAAAATTGAATTGAACATGGGTATTTCAAATTTTCATGTTCTGGATTTTTGTGTGTTTGAT GGTAAATGTTAGGTGAGAAGGGTATGAGGCTTCTGCAATCTGCAAACTTGGAGGAGCTTGTTACATCATATTTTCTTGAG ATCAAAGAAAAAAAAATTATAAGAAAATAATATTACACGTTTTAATATTTTATTATTTTTTATTAGAAAAATGAATTTTT TATGAAATTAAATAAGTGTCACGTCAGCATTCCGTTTGGTCAACAGACGGAACCTAACGGAAGGGCGTTAATCGCACGTT TTAGAAACGTCAGGGACCTTGACCGCACGTTTTATACACGGGGGGTGCAGATCGCACATTTATGAAACATCAGGGGCCCA AACTGGAATTAAGCCAAGCTTGAAATAGGTCCTCTGAACATCTTGAAGCTTTAAGTGGCCTTCAGCACGTTCTAAGATTA CAATGTCTACTACATGCCTTATCACTTAACATATTCTCATAATTGTGAGTTAGCACTTGAGTGACGTTATCTTTTAACAA CCATAGAACATCATGCTTTGTTTCTTGGTGATTTCCATCTTCCAACAAGTAGATGAAAAAATTGTTTTAGAATTTGATCC CTGAGCTTTGACTTTCCAAAAACACGTTGACCAACCAATAAGATTCTTCATATCAAATATGAGTGACAATGCAAGTCAAC TCGCTTCGATTCAGAGTCGAGTTGGCCTGCTAAAGAATGTGAGTTGGGAAAGCCAACTAACACCACCTCATGGCGGGTTG GCTTGTAAATAAAAATACCAATAAAAAATAATGTGATGTATCATGTATAAACATTAAAAACAAAATTGGTTTCATTCATG ATGGGCTAAAACAGCGAGCCCAAGAACTCATCCAAACATGTAGAAAACAGCACTGGGCAGTGAGCAGACAAGCTGGGGCT TTTGGGGTTGTCGGCGTTGACTCCAACGGATTTTCAGAACATTTCCGAAATGGAGAAGGAAGAAGGTCCCGTGTTCTGGT TCGAGACCTCTGGCTCTGTTTGTCACCGACACCACTTTCAATCCAATGGTCAACTTTCCGTACGTGTTCTCTTCTCTTCT CTTATCTGAATGTTGGGACTTTCATCTTCTAATGTATTGTAACCAACCCACTTTCTTGTTCAATCCAATGTTTTTTTCTT TCCAAATGGCATAGACCCTAATGTTCTTATCCATGTCATTTATTGTTAGTGTATAATATAAAATCGTGCTGCAATTCTAA TAGACATAAATTTGGAATTTCCTCAAGCTCAGTTCAGATGTAGTATCCTCTTCTAAAATGTATGAATTGATGAAAAAACA TAAGTTGCCATTCTCTCTCTTTGAGTATAGCAGGTCTTAGGTTTTGATTGTGAAGCTAAGTTGTGGGGGGTTGGATTTGC CACCCCACCCATTAGAAATGCCACCCCACTTTAACGTGGGGAAATACTTAAATGTCCCTCCGTGTTATACTCGGGAAGAT TAAGTTCCGGAGCGCTCCGGAAGTTAAACTTCCGGATCGTATCAATTGGTGTCATGATTTTTGGCGTGATCGTTAACTTT CGTAGCATATTGTTAAGAGTATTTGTTGAAAGTGTTTGTTTATTTGTAAGGCCTGCTATACTCTATGGTAGCGAATGTCG GGCTTTAACGGGACGACATGGGAGAAGTGTTGGAGTAGCAGAAATGAGAATGTTAAGATGGATGGGTGGGCACACTAAAA AGGATAAGATACACAATGAGCGGATTAGAGAAGATATTGGAGTGACGCCTATTGTGGAGAAGCTGACGGAATATCGGTTA AGGTGGTTTGGACATGTGCAAAGAAGGCCTATGGAGGCACCAATGAGAAGGGTGGATAACATGGTTTTTAGTCCTGTGAA GAGAGGTAGAGGGAGACAAAAAAGAACATGGGAAGATATTGTTAAGGATGATCTTATTATCAATAACATCCCTCATAATT TATGTTTTGATTGAGCTCAATGAGGTAGTGTGATCCATATAGCCGACCTCACTTAGTGGGATAAGGCTTTTGTAGTAATT GTTGTTATATGTTTAGCTAAACCTTTTCTCTCGTCACCCTGAGTGTTTTTGGTTTCTTTGTAGGTAATGCTCGTTGATGA TTCCAGGCCATTATACCAAAAGGTGGCTGGGTCTTTCATGAATAAATTTTTTCCATCAGGATATCCATACAGGTCGTTTG ATTTTTCTTGAATATGGTTATGGCTTAGACAGGCCTGTTCTGCGGGCTCAGTTTTTACGTGTTTCCTTTGCAGTGTAAAT GAAGGCTATCTCAGATACACTCAGTTTCGATCTGTTCAACATGTTACCAGTGCAGCACTATCAGTTCTATCAACTCAGGT CTTCTGATTACTTGAAAATCTCATTTAAGCAATTAATCAGAAACACGTTATTGTCTTTGAAAATGAATACTTACTGGCAT GGCAAGTGGCAACTGAGATATAAATTTCTCTTAACTCATGATTGGTTCATTCCTTAAACATTATATTATATGGTGAAGTC CATGTGCATGATACATATTTTGTTAACCATAGGGATGTAATCTTTTTCTGAAGTAATTAAGTGTGTGTCCTTGATCTGTA TGCTTATTCTTCTGCAGTCATTGCTATTTGCTGCAGGGTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGCTGGGTA ATTAGATACCATTTTAAAATTGACAATTTCTCGGACCAGTAATAGTAACTTCTTTTTAATGTATAACCCGTTTGTCCTGC TTACATCCATAGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCAAGAATGGATTC TGAACCTAAACGTTGGAGACTAATAGGTTTGCATTTGGGCTGGGGCTTTTCTATTACCAATTTCCCCTTATATTAGCTCT TACCTCTTATTTTCAAAGTTCTCAAGTTGTCTGACTGGAATTAGCTTTACATTTGCAGCTGATGTGCTCTATGATTTAGG CACGGGCTTGGAAGTGCTTTCTCCATTATGTCCACATCTTTTTCTTCAAATGGCAGGCCTAGGAAATTTTGCAAAGGTTT AGATTTTTATTGGGTTTTTGTAAAAAACAATTTCACATTATAGCATATGTTGCGACATAAAGTTGTCTCAGTGCTAATTG TTCGTTAAAGCTCATGGCCATTGGTTTTAGTATCCTGATTTAGATATCTGGTAAATGCATCATATTTTATGGTCTATTAA CTTCTCTCTGTTATTTGGGAATCAACAGGGGATGGCAGTTGTTGCAGCAAGGGCAACAAGATTGCCTATATATTCTTCAT TTGCTAAAGAAGGAAATCTCAGTGACCTGTTTGCGAAGGGGGAGGCTTTTTCAACACTCTGTAACGTTATTGGGATTGGA GTTGGAATTCAGCTAGCATCTACTATCTGTGCATCAGTGCAGGGAAAGGTATAGAGACCTTATTTGTTTACTCTTGAGCT TTAGTGTTCAATTTGATCTTCAGCTTTTACTTTTACAATTAGTTTGTGCCAACAATATATGCAATGTTGTTCTTGGTTGT GCAAGAGAGTCTGTGTCGGGGAAGATAGCGAGGGGAGGGGGGTTAAATTTTTTTGTTAGAGTTGGTGGCTTAGGCCAGGG AGGACAAGGTCTGTCTATTTATTCAGCTCTGATTGGTTACTTTATGTTCATTCTTTTTGGGTTCTATTATATTTTGAATA CAATTTCATTGCCTTTCATATATTATTTAATGATGGAGTTATAGAACTTTTTCGTCCGGTTGCTGTCGGTCCTCTTTTCT TTCAATCATTGATCGTGGAAATTTTGTTTCTTGTAATCAGAAATGTTACTAACAAACTAAAAAAGGAAGGACAAAGTAAG TTAATCGTGTTGCATATCTTAATGGTAAAATACACATTGTGTTGAGGATTCCAACTGATGGATTATGAAACATTTTGTTG TCAGATGGTTGTAGGTCCTCTCCTTTCAATTTTACATATATACAGTGTGTCTGAAGAAATGAGAGCAACACCTATCAATA CCTTGAATCCACGAAGAACTGCAATGATCGTGACAGATTTTCTCAAGGTCTGGTTTTTACCATTGTAGTAAATGAAATCA CTCATGGTTTCCTTCCTTTATTTGAACATGTGAAATGCTGTTTTAATGTTAATTGTATTCGAAAGCAGGCAGGAGTTGTC TCAAGCCCTGCTGATCTAAGATATAGAGAGGATCTGCTGTTTCGTGTCCGACTCACAGAAGATGCTGGAAATGTAAGAGT GGGGAGGGCTTTGCATGAGGTTATTAAGCCTTCCAGGCTTCTTGAATTAGAACAGGTACTTCCAGGGGAGAAGTTTCTCT TAAATCGTGGGGGTAAATGCGTCGACATGGTGTTGGAACAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTT GCTGCATATGCTGCACAAATTGAGAATTCCTCTCATGAGCTCAGTGCTAGTGTCCTGCATGAGGCTTACAAGAAAATGAC CGGTGTGTTTCCTGTATTTTTAAAAGAATTACAGAGCAAAGGGTGGCACACTGATCGTTTTCTGGATGGAACTGGGAGCC GCTTTGCATTCTAGGGTTCATAGAAATCCTGTATTGGTTTGAAATATTTTTTCTCCCACTATATGAGAGAAGTTTTGATG TAGTGTGGGTGTAGTGAATTCAATTGTTCATATTTCTTGAACTTAACTGTATATCTTAACTATTTTTTTAGGAATCCTAT TTGGTGGGCTATGATATGGCACTGGTGAAAATCAAATAAGAAAAACATAGAACTAGCACAATATTGTAAGATGTTTGTTA AATAAACTTGCCCAACTCTAAACCAGAACCATATGGACCAAGTCAAGAAGCAAGTAGGTTGGCGTAGTGGTTCAACACTT CGTTCCTTAAGTAATATTTAGGTGTTTGATTCTCAACTCTTGCAAATTGAGGAAACTTATTGGTCAGCCTTTCATCACTT AATGTGTTGACAATGGAGTTGAAGATTAGTCCCACAATTATCCAG
CDS sequence (LotjaGi1g1v0709600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGGAAGAAGGTCCCGTGTTCTGGTTCGAGACCTCTGGCTCTGTTTGTCACCGACACCACTTTCAATCCAATGG TCAACTTTCCGTAATGCTCGTTGATGATTCCAGGCCATTATACCAAAAGGTGGCTGGGTCTTTCATGAATAAATTTTTTC CATCAGGATATCCATACAGTGTAAATGAAGGCTATCTCAGATACACTCAGTTTCGATCTGTTCAACATGTTACCAGTGCA GCACTATCAGTTCTATCAACTCAGTCATTGCTATTTGCTGCAGGGTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAG CTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCAAGAATGGATTCTGAACCTA AACGTTGGAGACTAATAGCTGATGTGCTCTATGATTTAGGCACGGGCTTGGAAGTGCTTTCTCCATTATGTCCACATCTT TTTCTTCAAATGGCAGGCCTAGGAAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCAAGGGCAACAAGATTGCCTATATA TTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTGTTTGCGAAGGGGGAGGCTTTTTCAACACTCTGTAACGTTATTG GGATTGGAGTTGGAATTCAGCTAGCATCTACTATCTGTGCATCAGTGCAGGGAAAGATGGTTGTAGGTCCTCTCCTTTCA ATTTTACATATATACAGTGTGTCTGAAGAAATGAGAGCAACACCTATCAATACCTTGAATCCACGAAGAACTGCAATGAT CGTGACAGATTTTCTCAAGGCAGGAGTTGTCTCAAGCCCTGCTGATCTAAGATATAGAGAGGATCTGCTGTTTCGTGTCC GACTCACAGAAGATGCTGGAAATGTAAGAGTGGGGAGGGCTTTGCATGAGGTTATTAAGCCTTCCAGGCTTCTTGAATTA GAACAGGTACTTCCAGGGGAGAAGTTTCTCTTAAATCGTGGGGGTAAATGCGTCGACATGGTGTTGGAACAAGATGCTAG TGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAATTGAGAATTCCTCTCATGAGCTCAGTGCTA GTGTCCTGCATGAGGCTTACAAGAAAATGACCGGTGTGTTTCCTGTATTTTTAAAAGAATTACAGAGCAAAGGGTGGCAC ACTGATCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCATTCTAG
Protein sequence (LotjaGi1g1v0709600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKEEGPVFWFETSGSVCHRHHFQSNGQLSVMLVDDSRPLYQKVAGSFMNKFFPSGYPYSVNEGYLRYTQFRSVQHVTSA ALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLIADVLYDLGTGLEVLSPLCPHL FLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLCNVIGIGVGIQLASTICASVQGKMVVGPLLS ILHIYSVSEEMRATPINTLNPRRTAMIVTDFLKAGVVSSPADLRYREDLLFRVRLTEDAGNVRVGRALHEVIKPSRLLEL EQVLPGEKFLLNRGGKCVDMVLEQDASGEDALRGWLVAAYAAQIENSSHELSASVLHEAYKKMTGVFPVFLKELQSKGWH TDRFLDGTGSRFAF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 414 | 412 | 1.1E-236 | – | |
| PANTHER | 3 | 414 | 412 | 1.1E-236 | ||
| Pfam | 43 | 274 | 232 | 5.8E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0709600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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