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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0713300 |
| Transcript ID | LotjaGi1g1v0713300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Magnesium transporter MRS2-like protein; TAIR: AT5G64560.1 magnesium transporter 9; Swiss-Prot: sp|B8AJT9|MRS2I_ORYSI Magnesium transporter MRS2-I; TrEMBL-Plants: tr|I1N9N1|I1N9N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0713300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128142031..128146476) extracted from Lotus japonicus Gifu genome v1.2.
CTCAACACAACTCCTATGTAAAATTTCTTCACATGCCATCATTGTCCTCTCTCCCTCCTCATCTTCTCATTCCCTCACCT CATCCTCTTCTCTGCTCACCACTCACTCAACTAAATTTAATCCAACCCCACACTACTACTACTTCTCTTCAAACCACTTG AGTTACCAAACACTGAATTCTCTTCAAAATGGATCTTGCTGACTCTGCATCACTGGAACTTCAAGCTCCTTCTGCTGTAA CGAAGAAAACTGCTGTTTTCAGAAGCTGGATTCTGCTAAACCATGACGGCGTAGCCACTCTTCTAGATGTAGACAAGTAT GCTATTATGCGCCTGGTTGAAATCCATGCAAGAGACCTTCGAATTCTCGACCCTCTTCTCTCATATCCTTCCACCATTCT TGGCAGAGACAAAGTCATTGTTCTCAATTTAGAGGTAAAAAATCACTCTGTTTCTGTATCAACTCTTCTTTTTCCTTTTC TTTGTTGTTTCATGTAGGTTTGTTTGTTTGTTTGTTTTTTGCAGCACATAAAAGCTATTATCACTGCAGAAGAGGTATTA TTTACAGGTTTCTTATCTTCTCCACACATGGAATATTCAGTAGTTTTCAATTTTCCAGAGCTAAATTTTTAGTGCCTTGA TTGTAGGTGTTGCTTAGAGACCCTATGGATGATGATTTGATGCCGGTTATTGAAGAACTTCGGCGGCGGTTACCGATAGC AACTGCTGCTGGCCAAGGCCAAGGAGAAGAAGACACGGTTGCTCAAGATGGTGAAAGTGGAGAAGAAGATGGTGAGCTTG ATTTGTGGGAATTATTTTAATTTAAAACTTTCCCCAAAGTTAATTTGGGCTTAAGAAGTTGCATATTTGAATACACGGCG GCAGAAATCACATTAAAACCAAAATCACGGTCGACAAGCTTGAAAGCTAAAGGAAGTTGATTTTGCCCACTGTGATTTTG GTTCGCCGTGGTTTTCGGCCATGTATTTAAACATAGACCAATGGGAAATAGTGTTGTCTTGTGTTTTGAATTTGGAGACT CTTTTTCTTTCTATAATGGTGGGAAATTGAATTATGGTTTGTGTTGTAGAGTTTCCATTTGAGTTCCGGGCCTTAGAAGT TGTGTTGGAGGCAATTTGCAGCTTCCTTGACGCAAGGACAAGAGAGTTAGAATCTGCTGCTTATCCAGCTTTGGATGAAC TCACCTCCAAGGTAAATCAAGCCTTTGCAATGGATTGTGTGTGTGTGTGTTTTTATTTAAATACATATTTATTCTTTGTC ATGTTTCATGGATTTTCCACCTTGGTACAAGAACATGGCTACTGAATTTATACTAATCCAATGATTAGCTGGGCAGAATT TGATTTCTCATCATCATACCTCCTTTTTTTATGTTTAAATCATTCTAAACAAATTCTGATGATATCATCACCAAAGCATG AGAATTCTTACAAGCTTAGAAGTTGGAATATCTTAATACCATTGTCAATTCATCAAAAAATAACAACATTAAAAATCTAA GGTGATAAAAACCTTTGGTCATAATTTTGTCATGCAATTTAGGAATGCCTCTAACATTATTTTTTTTGCAAATACGAAAT TTTATTTTCATCCTAATCAGTCCTTAAACTTCAACTATTATATTGTAATAAGTCATTTTGTTAGCTTCAAAATAACTTAT TAGTGGTAAATAAACTTTCATTCTTATCTACTTTAAACAATTGATTCATATTTTTTGTCTAGAAAATTATTTTATTTAGG AATTGTTCACTATTAATGAGTTAACATGATCTCTTATAATAATAACAAGTAAGAACAAAACTAGTCATAAATGTGCCAAT TGGAAAAGGAATTAAAGTTTAAGGTAGCTCTAAGTATATTCCCCTGTTTTTTTTAATAGACACTTTCGAGATAGCAAAGG GGTTTTGGAGAGGAATATAGTTCTATGATCTATCTGAAAAGCTGCTTAAATTTATTTAATGTGGACCGGACCTAATACTA ATTTCTTGTGTTAAACTTTAGGTTGCTTGTATACATCTCCAAATCTGTGATATCAAACCAAAAAGTTGATAATTAATTTA TGATTTCCCATTATCTGTTGTCACAAAATTATATGTGAAATACTTTCTCCCCCTTCCATACTACTCTTGTTGACTGAGAT TTGTGTCCAGATCAGCTGTCGTAATTTGGATAAAGTGCGAAAATTGAAAGGTGCAATGACAAGGTTAACAAATCGAGTTC AAAAGGTTTGTTTTTTTTTTTTTTGAACTCCAAAAGGTTTGTTGAAATAACTACATTTTACAACTATTTTTATCCCCTTC AATCTTAAGAAGTAAATTCCATTGTTTTGTTCTTCATTATATATATAATTGTGATCCAAAAAGAATGTTGTATAAGCATT GCTGTCTTCATTTCTTACATACTTAGCAGTAGTTTGCTGTCAAAGGTTTTCACTTTCCTGATCATTTTAGAACTCAGAAT TTCCCTGTTTGCACTTACTTTGATAGCTTTCTTATAGATAAGAGATGAACTAGAAAACCTACTTGATGACGATGATGACA TGGCTGAACTTTACTTATCAAGAAAGTTTGCTGCTTCATCCTCTCCCACAAGTAGCTCTTGTGATCCCAAATGGCTTCAT AGCTCCCCAAATCCAGATTCAGAGATACATAATATATCAAATAAAACAAGTACAACAACAGTTGAAGGAGATAATGATGT TGAGGAGCTCGAAATGTTACTTGAGGTTATCAAAGTCTTCATCCTTAACTTTGGTGTGCAGATACTGTTTGATTAAATGA CTTGATCTATATGGTGTATTAAGCTAAATGATATGCTGTGCTTTTCAGGCCTATTTCATGCAAATTGATGGAACATTAAA CAAACTGAAAACAGTATGACCTGCATTTTCTTGTAACCTTCCCAACTTAATTATAATTTGAATTCTATCTTACATTATTA AGTGATAAACTTTCCTACTTGATACTTTTCCTCCCTATTTCAGCTGCGGGAGTATATTGATGACACGGAAGATTACATCA ACATACAAGTAAGTTTTAGGCACAAAAGAAAGTTTTCTATATATATCTGCTGTTTGGATATCTGTAACATTCTGAATTTC CGCTGAAAGTGCTTTTAAATTTTCCTAACGGAAATCCAAACATTTACTAAGCATATCAAAATAGAGGGGCAAAGTTTTCC ATTATATTGCTTAGCAGAATTTTCATACACCATTTATAGCAATATTAACAACACTTGGTGCTATGTTGCATATGCATGAC ATGTACAGCTTGACAATCACCGAAATCAACTGATTCAGGTATAAGCTTTTGGTCCCTCCCTTATGAGATTTTTTATGCCT AATCCTATACATACATTGTCTGAAGCATTAATTTGTCTCCAGAACCATATTTTATAATGTCTTTAAGTACTGCATTTAAT GTTTATCCTTGTTCTACCTAAATGATAGCTAGAGCTCTTCCTCAGTTCTGGGACTGTTTCTCTGTCCATATGTTCATTGG TGGCAGCAATATTTGGTATGAACATTCCATATACATGGAGAGAAGGTCACGGATATATATTCAAATGGGTATGTATGTTA AGAAAGAAATATTCCAATTTTGACTAACATGTTTTGCCATATACATGCGTCTGTGTCTGAGAGAAAGAGAGTATGTCTTT TTTTTTCCTTCTGAATTTTGTTTTTTCCAATTGAAAATGATAAATTTAGGTGGTTATCTTTGCTGGAATGGTTTGTGCAT CCTTGTTTTTATCCATAGCAGCTTATGCCAGACGCAAAGGCCTTGTTGGGTCTTGAATGTATAAAGATGAAACATCAGAT TGATTGAGGGAAAAAGTGTACAAGAAGTGGACAAGTGAGGTCAGTATTGGTATATGGCAACAAAACAATACTACCATATT TGTGGTACCACTTACATTATGGCCTTTATGGGAACAATAGATTGTTTTATCATGTAGCTTTTCAGAAATAAAAGAAGCTT GTTTTATCTTGTAATGGCTTTTAGTTGAGCACGCAATACAAATTTGTTCTATGCAGGCAATAAAAAATTAGCTACTAATA GAATAGCTTTCAATTGCCAGGTTGTATGCACTATACAAGTTTTTTTATTTGCTAATTAATTTTCTAAAAAAATTACTTCA GGCGGTATCCAAGTGTTGCAAAAAATATTTCATTAGAGGACTATTTTACCTGCATCTTGTATATGCCATTATTATCTCAT CTCTCTTTGCTTTTCAGATTGATTATGGTCCAATTCCATTTCCTCAGGATGCTAATCCATTATGCGCACGCCACTATCAA TTATCATAATTATATTGTTAATATTCCCAGACAATTTCTGAATTTCGTGCCGTCTCACACCATCTTTGGTCCCATGATTA TGAAATGGGTTATTATTAGTTGCATATATAATAATTGACCATTTTG
CDS sequence (LotjaGi1g1v0713300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCTTGCTGACTCTGCATCACTGGAACTTCAAGCTCCTTCTGCTGTAACGAAGAAAACTGCTGTTTTCAGAAGCTG GATTCTGCTAAACCATGACGGCGTAGCCACTCTTCTAGATGTAGACAAGTATGCTATTATGCGCCTGGTTGAAATCCATG CAAGAGACCTTCGAATTCTCGACCCTCTTCTCTCATATCCTTCCACCATTCTTGGCAGAGACAAAGTCATTGTTCTCAAT TTAGAGCACATAAAAGCTATTATCACTGCAGAAGAGGTGTTGCTTAGAGACCCTATGGATGATGATTTGATGCCGGTTAT TGAAGAACTTCGGCGGCGGTTACCGATAGCAACTGCTGCTGGCCAAGGCCAAGGAGAAGAAGACACGGTTGCTCAAGATG GTGAAAGTGGAGAAGAAGATGAGTTTCCATTTGAGTTCCGGGCCTTAGAAGTTGTGTTGGAGGCAATTTGCAGCTTCCTT GACGCAAGGACAAGAGAGTTAGAATCTGCTGCTTATCCAGCTTTGGATGAACTCACCTCCAAGATCAGCTGTCGTAATTT GGATAAAGTGCGAAAATTGAAAGGTGCAATGACAAGGTTAACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACC TACTTGATGACGATGATGACATGGCTGAACTTTACTTATCAAGAAAGTTTGCTGCTTCATCCTCTCCCACAAGTAGCTCT TGTGATCCCAAATGGCTTCATAGCTCCCCAAATCCAGATTCAGAGATACATAATATATCAAATAAAACAAGTACAACAAC AGTTGAAGGAGATAATGATGTTGAGGAGCTCGAAATGTTACTTGAGGCCTATTTCATGCAAATTGATGGAACATTAAACA AACTGAAAACACTGCGGGAGTATATTGATGACACGGAAGATTACATCAACATACAACTTGACAATCACCGAAATCAACTG ATTCAGCTAGAGCTCTTCCTCAGTTCTGGGACTGTTTCTCTGTCCATATGTTCATTGGTGGCAGCAATATTTGGTATGAA CATTCCATATACATGGAGAGAAGGTCACGGATATATATTCAAATGGGTGGTTATCTTTGCTGGAATGGTTTGTGCATCCT TGTTTTTATCCATAGCAGCTTATGCCAGACGCAAAGGCCTTGTTGGGTCTTGA
Protein sequence (LotjaGi1g1v0713300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLADSASLELQAPSAVTKKTAVFRSWILLNHDGVATLLDVDKYAIMRLVEIHARDLRILDPLLSYPSTILGRDKVIVLN LEHIKAIITAEEVLLRDPMDDDLMPVIEELRRRLPIATAAGQGQGEEDTVAQDGESGEEDEFPFEFRALEVVLEAICSFL DARTRELESAAYPALDELTSKISCRNLDKVRKLKGAMTRLTNRVQKIRDELENLLDDDDDMAELYLSRKFAASSSPTSSS CDPKWLHSSPNPDSEIHNISNKTSTTTVEGDNDVEELEMLLEAYFMQIDGTLNKLKTLREYIDDTEDYINIQLDNHRNQL IQLELFLSSGTVSLSICSLVAAIFGMNIPYTWREGHGYIFKWVVIFAGMVCASLFLSIAAYARRKGLVGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 324 | 324 | - | – | |
| PANTHER | 12 | 390 | 379 | 1.1E-216 | – | |
| PANTHER | 12 | 390 | 379 | 1.1E-216 | ||
| Gene3D | 12 | 98 | 87 | 7.9E-11 | – | |
| CDD | 27 | 387 | 361 | 3.27861E-104 | ||
| MobiDBLite | 118 | 137 | 20 | - | – | |
| Coils | 190 | 217 | 28 | - | – | |
| MobiDBLite | 233 | 268 | 36 | - | – | |
| Pfam | 276 | 376 | 101 | 7.8E-7 | – | |
| Phobius | 325 | 346 | 22 | - | – | |
| SUPERFAMILY | 326 | 376 | 51 | 5.49E-5 | – | |
| TMHMM | 330 | 352 | 23 | - | – | |
| Phobius | 347 | 357 | 11 | - | – | |
| Phobius | 358 | 382 | 25 | - | – | |
| TMHMM | 359 | 381 | 23 | - | – | |
| Phobius | 383 | 390 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0713300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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