Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0714900 |
| Transcript ID | LotjaGi1g1v0714900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-carotene isomerase D27, chloroplastic; TAIR: AT1G03055.1 beta-carotene isomerase D27-like protein; Swiss-Prot: sp|C7AU21|D27_ORYSJ Beta-carotene isomerase D27, chloroplastic; TrEMBL-Plants: tr|A0A0B2PSH0|A0A0B2PSH0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0714900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128281996..128289896) extracted from Lotus japonicus Gifu genome v1.2.
AGCTAACAAATATTCAATATAAAGACAAAATTATAAAATACATTTAATATGAACAATTTGACTGAGAAAAAATCCAACAC AGTACAAATGTCCTCAGCACTCAGCAGCACTGTAATTATAAAATGATGGAGCACATAACAATATTCAGGATTCAAATATC TATAATAAAACAGTAGACTTGTAACATCTTGTTAGTGAAATGTACATTCAAATATGCTTTTTAATATTTTACTTGAATTA ACGGTAAAACTCTCTGTACCAAGTATTTAGCGCAACTATGTTCATAAAAGCTTAAACTAAGAACTTCTGCTTAAGTTAGA ATAACCTTACGTCAGCTGATCTACACGTATGATGGTCATATAATACAGTCTCAAATATAATATCTTATAAAATCATTTTA AATTTTATATAATGCATGTTATTTGTAAGATTAGTAGTTCGGAACCTGGAGCCAAGACAAAAAAGCATCTATAATATCCA AACAAACCGCCAAGAACAGAATCTTGAGCAAGAGCTTTGTGTGAATACTGAATATGCTATTCATGCACTCTTTGTCCTCA TCATCATATGTGATTCTCTCTCAACCCCACCATTTAAAACTACAATACAACCATACTTTATTTCACTCTCACATGAAAAT CACAATAACACTAAAAAATGGAAACAAGTGTTGTGAGGCAGAACATGATTTCAATTTCAACACCAACTTCACCTCTCTGG AAGCTGATCAAACACAAACCACAACATCGACCTTGTGTGGTTGCAGTGCTCAGAAATCCTTTAAGTGACATTGCAGGAGC AGCAAGAAAAACTATAGGAGAATCTGGTAAGTTACCATATACTCCTAATTCGATAATATAATGCTAATTACATACTTTCC TAATTGCATATCTCATATTTTCGAAGTAGAGATAAAGTTTCTCGTTTTTAACAGATTCTCCTATGAAAACTAATATCTAC AAGGATAACTGGTTTGATCGCTTAGCAATAAACCATCTATCAAAAAGTGTTCAAGAAGCCACAGGTTCACAATCATATCA TAATACCCTTTTGTCCATTGTTGTTATTTCATTTCAATGAGAAGTTCTATATATAAAATTTGAGTCTTTTGCAGGAGTGA TTAACCATAAGAGTGGGTATGAGGGTCTGGTTGAAGCAGCTAATGTGGCTAAACATAAATTTAGTCCTGTTCAGCAGCAA GAGGTTGTCATTCAAGCTCTTGACAAAGCTTTTCCAAAGCCAATACTAGATTTGGTAAGTCCATTACTCTCTAGAGTTTG TTTTGTGCTTTCTCTCATGTCTCTGTTTTGACATGCTTCCCAAAATTTGTTTTGTCATTCATTCATATAAGCACCTCTGG ATTTGAGCTTATTGAAACTTTTCTATTAGAAAATGAATTGAGTAAGTTTCAGTAAGTGCGCTTTAGCTTGCATCCAAATG CTTATTTCCCTCTTCCATTCATTTGCATTTCATAAAACAAATTAGTTTATTATTTTACAGACATTCTTTGATTCTGCTCT TGTGCTTTCCTTCTTCCATTTCAAGTCATATAAGTAATTTTACCTTTTCCAATTCCACTATATTAAGGGTTAAACAACTC AATATGCAATTTTCCATGTTATTGGAGATCATGGTGAATAGAAATGAAATTAATGGAGGTTATTATTTTCTTTCTCTGTA AGAATTGGTTTATGTTATTTTGTGTTAGAAAGGTTTTAATTTCTTGTTCTGCTTCTACTATTTGCTTTTATTATTTAATA ATGCCTGAGCATTGTAATTTACGGTAATGAATATGTTGTTATGTGTGGCACATATGGCAGATAAAGACACTGCTACCACC ATCTAAATTTGCAAGGGAATATTATGCCGTCTTCACCACTTTGTTCTTTGCTTGGTTGGTCGGACCATCCGAGGTGAACA ATGTCTTACATTTACGTAATAGACTCTGAATAATTTTATATTATATTAAATTAATAATTGAGATTGTATTGTACTTATAC AATTTGTATTGTTCATGATTTGCTACTAACATGTTTCTGGCTATCAGCTCAATCTTTTTTTGATATTAGCTCAATTTTTT CTCAAAATTAATTTTATTTATCGGAGAAAAAAACTTGACCTTAGTATTAATTTAGAAAGATTTTTAAACATGCACTGAAT TACAATTGAAGATGAACGTGTCACTTGACCGCTATGTAGGTCAACTGGTCGGACCATTATGTCCGGTTCAATTTTTACAA CCTTGTTTGATAAGTCATCATAAAAACGCATTTAAACTTTTTAAAAAAGAACATAAAGATTGCACTTTAATTTATTTAAC TCCAAATAGAAAAACCTAGTTGAAGATGTCTGGTGACATCCTTTTACTTTCCGTCCTATGATTTAAAAAATGAATTTAGA AGGTTAATTTTTTTTTAACTTTAGAAGGTCTCAATGCTTCATATCCCTCGGGAGCAGAACATGGTAGCCGATGCAATGGC AAAACTTGCCCTTCATGAAGGATGGGATTGGAAAGTTTGGACGCTTCCCCCATCCACAATAGTTCCCCTCCTGTGTGTCA GGATATAGTTGCTTAGTTGTTGCTTCTTTTTATTTCCATTTGTAACCAACAAAAAAAAATCTCATTATGATCTCATTAAT TTCACATTGAGAAGGTTAGAGAATCGGAGGTCAACGGAAGAAGAGAAAAAAATGTAGTCTACGTCAAAAAATGCAGGTTA GTTCATTCATTATCATGGTGATTATTGTTTTCTTTCATATGATACACATCTTTAACAGAAAATGGTGCTCAATTCACCCA CCTAACACAGATTATAATTGCAACGCACAATCCACTACTATCATTACAATTCTCCAACCTCCTATAATCTATTCCCATCA TGATTATCATGATCCCCATCAAGTTTATTGTCAATACCATTAACTATGTCAATTTTCATCATTTCACCTAGTTATATTTA ACCTGACATTTTGTGTAAATAACAATATGTGCAGGTTTTTAGAGGCGACAAACTGTGTAGGAATGTGTACTAATATCTGC AAAATGCCATCTCAATCGTTTATCAAGGACTCTCTTGGTATGTCATTCAACATGGTCCCAAGTAAGTATCTCAGAAACTA CACTTGCTTGAGATCAAGCATAGTTCTATTTGTTCATACACCAATTTATTTCAACTGTTGCAGAACTTGTATTAATATGT TTGATATTGTTATTGAAACCCATTATTACATTTAATTCTTATGACATGAACTAAAATAGAAGTCCTTTTAAGTGTATGTT TCTAGGATCCAAAACCTTTTGCCCTCATTTTGTGTCTCGTTCTCGGTCTCACCCATAGAATTGTGTCATGTCATTTAAAA ATCACAATATAATGTTATAATGTCATATTTATGCCTTTTTTAATTGATATGCCGTAAATCTATTGGCATTGGCACACAAA TGGAGCAGAAGACTTCCATCCATGTTTATGACATTGGCAAAATGTCATGTTTTAATCCAAAACTAAACCTCCATGGAAAA GATCCATGGTGCTGATAAAAAACTAAATCTAAGATTATCTATTTTTAGTTAACCGACAATGAAATATAAATGGAAAAAAA AGAGCACTCTTCTTACTTGAAAGAGTATCATGGCCTCTACACGTCTCAACTAGATTGTGGATGCCAGCATCAGCATCAGC ATTTCTATGGAGGACCCCATGCACATACCACTAAGGGTGCAAAACTATTAATAGACCCATCCAACCTCGGATGAGGCTTG AGGAACCAGAACACAGATAGATGAAATATACTGCATACTTTTGATAAAGAAATTACACCTAAAAAATAACCATAATTAAA GTTAATAGATAGTGTTATTCTGTGAAGTGTGAATGATATCTGTCATGAACCCACCATAAAATGTTTTCTGTTTACCAAGA GCATTCAAATTGTATATCATCATGACCATGTATAAATGGACAATAGTAAGCAAGGGAAATCCCTATGATCATCAAATAAA TTCCAATAATTAATGGACAAATCCAATCTGATGTTTTATTTATCTTTTGATTTGCAGATTTTGATGACATGAGTTGTGAG ATGATATTTGGGCAGGACCCTCCAGCATTAGCTGATGATCCAGCACTGAAGCAACCTTGCTACAAACTATGTAATTACTT TATTGCAAGATTTGTCACATTTATTTGCATGCCCATATTATCTTTTAAATAACTAGCATACTGTGAAATGAAGAAAAGAA ATTCTCCAGATCACTGCACATTCTCAGAGATATGCTTTTGTCACTACGATTTAAGAAACGACATAACTGCATAAGTAAAA TTTGTAACTTATAGCAGAAAGTTGAATGAAAGTATGAAACTAACTTTGCATTTTCATGCAGGTAAGGCATATAAACAGCA TGGACCGAGCTGCCACGATTAATGCAGAGAGTATGGATGGTAGGAGTCATCTTAAGAAACATTATTCTATACTAATCAGT AATCACTAATAGTTACATTAATATACTTAGTTTCTTTTTTGGGGATATTACCTGGTTATCTGCATATCTCTGCAGAAAAT CATGAAGGAGAAAACTTAGATGTTGTTTCATATGTGCAGTTTGGGGAGAATTGGTTTGACTAGAGATTTGTTGTAGGCTT TGAGGTCAGCAAGGGTGGAACAAGTGTGTCTCCCACATATTGTGTGCTGCCAAAGTTCAGGCTCATCAGCCATAGTTTCT CTCAATGAAGTGCTCCAACACACTCAGAACCAATCATTTGCAGGTGGATTTCCATCATTTTACTAGTTTCAAAGTTCTTT CTTTTTGGTTTTTAAATGTGTAAAAGCACAAGTGGCCAACCGGCTTAAGGTTTATTTATAATTTTTTATGATAGGAAACT AGTCTTTCCAATGTTTTCAGCCCTTTCCCAATAATAATAGAACACTAATAAGTAAGAAAGAAAAGGACACTTTCCTAGTA GTTTTCGGCTATGTTTGTATATCAGTTGAAATCAATACAAATAGATGTTGGAACGCTCGAAACTTTTCTTATAAATTGAG ATAAAAGTCTATTCACATTATATTTGATTGATATCAAAACACACACTTCATCCTTCAAGCTAAAGCAGAGGAACTTTGAT TAAAGCAGAGGAACTTTGATTATTTGGAGAATATAAATAGGATGTAAAATATAGTTGACTAGTAACAGCATGAACCCCAC CTTGCTAATAGTGAACACTAATGCATTGCATCAGAGTGATGTAAATAGCATTTATAATCTGCTTTGCCGTCCAATATGGA AAATTAAACATGTGGATGGAGTTTGGAAGTTGGAAGTCAAAGTGGAGTTGCCTGCCATTTGTTGTTGGTTAAAATGAAAT TTAGCAATCATGGAGATTGGAGTAATCCATGCACTCAACAATAGCAAAAGATACATTAGAAAATATGTATTTGAACCACA ATGGATTCATGACCGTCATAACTCATAATCAAATAGGAACACTTGAAATGGTGATGTACTCTGATATACTAAGGGGTTGT GTAAAACACTTATGTTTCTTTTTACATCGAAAATATAAACTCCACCCGTGAGGAATTGATCTCTGGACCTATCCTACCTA ACCCATATGTATCATATTTCTTACCACTTGAGCTATCATTTGAGTACTAAATATAAGAGTTATTTAACTTCACCCTAATG GTCAAGTATGAGGTATGATTATTTAAAAAAAAAAGAGAGAAAAGGTTATAAATGTTTTGCTCATTTATCTTAAATAGCTC TTAAATGACATTTATAAATTTCATGCTAAAAAAATAGAGTATATTTCTTAAATAATATTGTACTTTTTTTGGTTTTCGTT TGTCAAAAACTTTTATTCGGTTGAAAAATTATAGTGTACTGCTTATTACAAAACCATATGTGTTGGAGGAAACTGCAAAA TTGATTTGATCAAAGCCCACAAGTCCTTATTCCTACATTGCTATAGAGACACTTACGCTTAAGCCCAATTTAGACTTTGG TTTGATCAAAAACCTATAAGCCCTTATTTCCTTTCCATTTAGCTAGGTTTGTGAATATTTCGTGAGTTGGCCCAACATTT TCTCCGCAAGAGACCCTTAGCTTTTTCTTTTATTTTGGTCATCATGAATGGTTTTTTAATTTTTTTTTTTCAGTTTTAAA TGTTTCAAATGGGCGAGCAAAAGCAAGCCAATATTGTATTATGCAGTATGCACTAAGAGCATCTCCAATGCATAGTTGCT AGTTGGGTTGCTTAAAAACTATTTCGGTGGGTCCAGACTGACACATAGGATTTAAGCAACTCAAGCAGAATTCCCTCCAA CCACGGTTGCTTAGTTTACTTTTAGTTGGGTCCCATTATACCTCTTATATTTATATTATTTCAAGGTAATGACACTATAC AAGTACATGAATGAAATATAAAATATGATTTTTTGGTCAAAAAATAAGGAGAGAGAAAATAAGCAACTGTTGCTTAAATT TAAGCAACCCAACTGCCACGTCATGTTGCTCCAGTGGTGCTCCAAAATAAGCAACGTTGCTTAAGTTGCCAACTGGATTT AAGCAACCCCATTGGAGATGCTCTAATGTTGCTAAGTTGTATTAGCTTGACTTAGGCATGTATCATATGAAGATTTAAGA ATTTCTGACTCCACTGAATCAATTTCCTACAAATTTTGGTCATTTATGAGATTTTCAAAATAAAAGTGTAAGTGTGTTCA TTAAAAGTATACGACATTTTTTGAAAAAATAAAAGTGTATATGCAGTCATATAATGAATCAAACTTCGCTCGACAATGAG CACATTGACAAGTTCTTATACCATACGACCAACAAGTGGTTGGAGATTTGAATTCCAACTCCTGTAAATGAAATAAGGTT ATTGGTCAGCCCCTTACTTCTGAACGCGCTGATAGTAGGGTGGAGAATTAATCTCACGACTATCAAATGTGGGGATACAT TCATCAACATTAAAACAATATGGCAAAGAACCCCAAAGAAAGAGACAAGGTATGTGTAGTCAATACTTGTCAATAGCTAT TTACAACCAACCAAACAAGAATGAGTGGTCAAGCTGAGTGAGATTCTTTGCTCAATAATTCTTTTTTCCCTTTTCTAAAA AGAGATATCTCTGTTCTCTAATTGGCCGGAAACCTATTGAATGAGGCCAGGTTTAATGTAAGGCATGAGAAAGGAACAGT AGACACTGAACCCTAATTGTTGGACATGGATGGGCCTACCCAATGGCAAAATAGTCTATGCCAATGGAATATATGGGCCA ATAGGCCCACTACTTAGAGAATAACAGGAAAAAAGGGGTAAGTCTCAACCCCTGGAAGAAGAAAAAGGCTGCTTAAGTAC CATCCATTCAGAGCCCCACCAAGAATGAACCTTCTCTTCATAATAATACTGTTTGGCCGCAGCAAATGATGATAGAATAC AGAAGGAAACGTTAAAGTTTCAAATACCTATCTTACTATAATTGAAGAAAGAAAAGTGAAGAAAAGGATGGCACTCTTAA TTATTGGAGTTGCATGCCATCAATTGCTTGTTCACGTTCTACATTTAGATGGTGGGGAAAATGGAAATGAGTGAAATATT TTGTTGCTTTTTTAGTTACTAAATGTTTTATTGGTTTTGACTAAAAAAAGTTAATTTTCTTGGTAGTGTTGTTGTCTTTG TCAAAAACCTTAATCTGATTTCTAAAACATAAAGGAGATCCAACTAGAGAAATTGGATGAGGAGTTGCCATCATGTAGTT GATGTAATCTCTGGTGACTAATTAAGGAACCAATTATGCAGCTATGAGTCAGTTAGTACTTGCTCCATTTAATGTTTTTT CATCTTCAATTTTCCCTTAAAAAGTGTACTAACACATTGGGTAATTATCATGTCAAACAAT
CDS sequence (LotjaGi1g1v0714900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACAAGTGTTGTGAGGCAGAACATGATTTCAATTTCAACACCAACTTCACCTCTCTGGAAGCTGATCAAACACAA ACCACAACATCGACCTTGTGTGGTTGCAGTGCTCAGAAATCCTTTAAGTGACATTGCAGGAGCAGCAAGAAAAACTATAG GAGAATCTGATTCTCCTATGAAAACTAATATCTACAAGGATAACTGGTTTGATCGCTTAGCAATAAACCATCTATCAAAA AGTGTTCAAGAAGCCACAGGAGTGATTAACCATAAGAGTGGGTATGAGGGTCTGGTTGAAGCAGCTAATGTGGCTAAACA TAAATTTAGTCCTGTTCAGCAGCAAGAGGTTGTCATTCAAGCTCTTGACAAAGCTTTTCCAAAGCCAATACTAGATTTGA TAAAGACACTGCTACCACCATCTAAATTTGCAAGGGAATATTATGCCGTCTTCACCACTTTGTTCTTTGCTTGGTTGGTC GGACCATCCGAGGTTAGAGAATCGGAGGTCAACGGAAGAAGAGAAAAAAATGTAGTCTACGTCAAAAAATGCAGGTTTTT AGAGGCGACAAACTGTGTAGGAATGTGTACTAATATCTGCAAAATGCCATCTCAATCGTTTATCAAGGACTCTCTTGGTA TGTCATTCAACATGGTCCCAAATTTTGATGACATGAGTTGTGAGATGATATTTGGGCAGGACCCTCCAGCATTAGCTGAT GATCCAGCACTGAAGCAACCTTGCTACAAACTATGTAAGGCATATAAACAGCATGGACCGAGCTGCCACGATTAA
Protein sequence (LotjaGi1g1v0714900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METSVVRQNMISISTPTSPLWKLIKHKPQHRPCVVAVLRNPLSDIAGAARKTIGESDSPMKTNIYKDNWFDRLAINHLSK SVQEATGVINHKSGYEGLVEAANVAKHKFSPVQQQEVVIQALDKAFPKPILDLIKTLLPPSKFAREYYAVFTTLFFAWLV GPSEVRESEVNGRREKNVVYVKKCRFLEATNCVGMCTNICKMPSQSFIKDSLGMSFNMVPNFDDMSCEMIFGQDPPALAD DPALKQPCYKLCKAYKQHGPSCHD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 263 | 261 | 4.9E-114 | – | |
| PANTHER | 3 | 263 | 261 | 4.9E-114 | ||
| Pfam | 158 | 238 | 81 | 4.9E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0714900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…