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IPR025114

Source: InterPro

Description

IPR025114 is a Beta-carotene isomerase D27-like, C-terminal.

<p>Beta-carotene isomerase D27 (also known as Protein DWARF-27) from plants is involved in strigolactones biosynthesis. It is a beta-carotene isomerase that converts all-trans-beta-carotene into 9-cis-beta-carotene, which is cleaved by CCD7 into a 9-cis-configured aldehyde [[cite:PUB00088582], [cite:PUB00095645]]. This is an iron-containing protein that localises in chloroplasts and is expressed mainly in vascular cells of shoots and roots [[cite:PUB00095646]]. This entry also includes some uncharacterised proteins from bacteria.</p> <p>This entry represents the C-terminal domain of Beta-carotene isomerase D27 that may contain an iron binding domain [[cite:PUB00095646]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
Lj1g3v4449220.1
– PREDICTED: beta-carotene isomerase D27, chloroplastic-like [Cicer arietinum] gi|502109805|ref|XP_004493731.1|
Domains
4
Lj5g3v1598310.1
– Uncharacterized protein TCM_004827 [Theobroma cacao] gi|508703392|gb|EOX95288.1|
Domains
4
Lj6g3v0227600.1
– PREDICTED: beta-carotene isomerase D27, chloroplastic-like [Cicer arietinum] gi|502134276|ref|XP_004502060.1|
Domains
4
LotjaGi1g1v0714900.1
– Beta-carotene isomerase D27, chloroplastic; TAIR: AT1G03055.1 beta-carotene isomerase D27-like protein; Swiss-Prot: sp|C7AU21|D27_ORYSJ Beta-carotene isomerase D27, chloroplastic; TrEMBL-Plants: tr|A0A0B2PSH0|A0A0B2PSH0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0714900
Domains
5
LotjaGi5g1v0243500.1
– Beta-carotene isomerase d27, chloroplastic; TAIR: AT4G01995.1 beta-carotene isomerase D27; Swiss-Prot: sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic; TrEMBL-Plants: tr|A0A0B2PM23|A0A0B2PM23_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0243500
Domains
10
LotjaGi5g1v0243500.2
– Beta-carotene isomerase d27, chloroplastic; TAIR: AT4G01995.1 beta-carotene isomerase D27; Swiss-Prot: sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic; TrEMBL-Plants: tr|A0A0B2PM23|A0A0B2PM23_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0243500
Domains
10
LotjaGi5g1v0243500.3
– Beta-carotene isomerase d27, chloroplastic; TAIR: AT4G01995.1 beta-carotene isomerase D27; Swiss-Prot: sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic; TrEMBL-Plants: tr|A0A0B2PM23|A0A0B2PM23_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0243500
Domains
10
LotjaGi6g1v0032800.1
– Beta-carotene isomerase D27, chloroplastic; TAIR: AT1G64680.1 beta-carotene isomerase D27; Swiss-Prot: sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic; TrEMBL-Plants: tr|V4TRD9|V4TRD9_9ROSI Uncharacterized protein; Found in the gene: LotjaGi6g1v0032800
Domains
5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
PTHR33591:SF4 PANTHER 1 12.50